Query         gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 225
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 39220
Date          Mon May 30 05:10:56 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781128.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PRK10808 outer membrane protei  72.7     1.3 3.3E-05   24.4   0.6   49  176-225   146-195 (347)
  2 pfam01389 OmpA_membrane OmpA-l  57.1     2.3 5.9E-05   22.9  -0.6   49  175-225   124-174 (175)
  3 pfam07071 DUF1341 Protein of u  54.8       5 0.00013   20.9   0.8   14  101-114   176-189 (218)
  4 TIGR03581 EF_0839 conserved hy  51.8     6.2 0.00016   20.4   0.9   17  100-116   175-191 (236)
  5 pfam02182 YDG_SRA YDG/SRA doma  38.5      17 0.00042   17.8   1.4  130   78-225     7-146 (154)
  6 PRK10115 protease 2; Provision  37.1      32 0.00082   16.1   2.7   27   77-105   128-155 (686)
  7 TIGR01073 pcrA ATP-dependent D  34.5      10 0.00026   19.1  -0.2   18  140-157   299-316 (811)
  8 TIGR01368 CPSaseIIsmall carbam  32.6      39   0.001   15.6   2.5   29   87-127     5-33  (383)
  9 CHL00174 accD acetyl-CoA carbo  29.2      24 0.00061   16.9   0.9   55  138-194   248-304 (305)
 10 KOG4399 consensus               22.1      22 0.00057   17.1  -0.3   58   20-94    148-206 (325)
 11 TIGR00069 hisD histidinol dehy  20.7      27  0.0007   16.5  -0.1   52   21-80    350-402 (435)
 12 KOG0754 consensus               20.1      69  0.0018   14.1   1.9   50  147-218   186-235 (294)
 13 pfam01828 Peptidase_A4 Peptida  20.1      50  0.0013   15.0   1.2   32  110-143    46-77  (208)

No 1  
>PRK10808 outer membrane protein A; Reviewed
Probab=72.69  E-value=1.3  Score=24.43  Aligned_cols=49  Identities=24%  Similarity=0.345  Sum_probs=34.0

Q ss_pred             HHHHCCHHHHHHHHHHCCCCEEEEEEE-CCCCCHHHHHHCCCCCEEEEEEC
Q ss_conf             765033267777753003533588961-68765455543067000057849
Q gi|254781128|r  176 KVIGVGIEKKLASMLSIRGEYRYVACY-DQPWDVSKWREKGDFTAGVVLRF  225 (225)
Q Consensus       176 kvigvgiekklasmlsirgeyryvacy-dqpwdvskwrekgdftagvvlrf  225 (225)
                      -..|+|+|-.+..-++.|.||||+.-. |..+.-.++ .-+.++.|+..||
T Consensus       146 ~~~g~GveY~lt~~~~~R~eYq~~~~igd~~~~g~~~-d~~~~slGlsY~F  195 (347)
T PRK10808        146 PVFAGGVEYAITPEWATRLEYQWTNNIGDANTIGTRP-DNGLLSVGVSYRF  195 (347)
T ss_pred             CEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCC-CCCEEEEEEEECC
T ss_conf             2067203588063726888899981057555557467-7756999999637


No 2  
>pfam01389 OmpA_membrane OmpA-like transmembrane domain. The structure of OmpA transmembrane domain shows that it consists of an eight stranded beta barrel. This family includes some other distantly related outer membrane proteins with low scores.
Probab=57.07  E-value=2.3  Score=22.91  Aligned_cols=49  Identities=22%  Similarity=0.430  Sum_probs=33.8

Q ss_pred             HHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH--HCCCCCEEEEEEC
Q ss_conf             77650332677777530035335889616876545554--3067000057849
Q gi|254781128|r  175 DKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWR--EKGDFTAGVVLRF  225 (225)
Q Consensus       175 dkvigvgiekklasmlsirgeyryvacydqpwdvskwr--ekgdftagvvlrf  225 (225)
                      .-+.|+|+|-.+..-+++|-||+|..-..  .+.....  .-.-++.|+.-||
T Consensus       124 ~~~~G~G~eY~it~~~~~r~eYq~~~~~g--~~~~~~~~~D~~~~slGlsYrF  174 (175)
T pfam01389       124 SPLFALGVEYAVTPELAVRLEYQYLNNIG--DLHKQGKRPDNGSASLGISYRF  174 (175)
T ss_pred             CEEEEEEEEEEECCCCEEEEEEEEEHHCC--CCCCCCCCCCCCEEEEEEEEEC
T ss_conf             53888888998075827888899922258--5335676677777999999777


No 3  
>pfam07071 DUF1341 Protein of unknown function (DUF1341). This family consists of several hypothetical bacterial proteins of around 220 residues in length. The function of this family is unknown.
Probab=54.75  E-value=5  Score=20.93  Aligned_cols=14  Identities=71%  Similarity=1.165  Sum_probs=6.4

Q ss_pred             CEEEECCCCCCCCC
Q ss_conf             20232355777700
Q gi|254781128|r  101 EGFHLEPRGGIDGD  114 (225)
Q Consensus       101 egfhleprggidgd  114 (225)
                      +||-|||.||||-|
T Consensus       176 ~g~~lEPTGGIdl~  189 (218)
T pfam07071       176 HGFYLEPTGGIDLD  189 (218)
T ss_pred             CCCEECCCCCCCHH
T ss_conf             69366667884677


No 4  
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=51.77  E-value=6.2  Score=20.36  Aligned_cols=17  Identities=59%  Similarity=0.944  Sum_probs=12.1

Q ss_pred             CCEEEECCCCCCCCCCE
Q ss_conf             32023235577770001
Q gi|254781128|r  100 VEGFHLEPRGGIDGDKV  116 (225)
Q Consensus       100 vegfhleprggidgdkv  116 (225)
                      -+||-|||.||||-|..
T Consensus       175 ~~g~~lEPTGGIdl~N~  191 (236)
T TIGR03581       175 KHGFYLEPTGGIDLDNF  191 (236)
T ss_pred             HCCEEECCCCCCCHHHH
T ss_conf             76915666798567779


No 5  
>pfam02182 YDG_SRA YDG/SRA domain. The function of this domain is unknown, it contains a conserved motif YDG after which it has been named.
Probab=38.52  E-value=17  Score=17.81  Aligned_cols=130  Identities=30%  Similarity=0.450  Sum_probs=62.1

Q ss_pred             ECCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCEEE-----EEEEEEEEEECCCCHHHEEEEEEEEECCHHHHHE
Q ss_conf             23247663177750786111243202323557777000123-----6676410122078501000001133252321000
Q gi|254781128|r   78 LNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAG-----TLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNI  152 (225)
Q Consensus        78 lngvsigldgqdgtlvygaslgvegfhleprggidgdkvag-----tllfrtgftfdnnnssilqntliygfggarirni  152 (225)
                      +.||.+|-     ..-|-..|-+.|.|..+.+|||+.+..|     ....--|+.=|-.+    -++++|-=-|.+-++-
T Consensus         7 ipGv~VGd-----~f~~R~el~~~GlH~~~~~GI~g~~~~g~~~A~SIV~SGgYedD~D~----gd~l~YTG~GG~~~~~   77 (154)
T pfam02182         7 VPGVEVGD-----IFFFRVELCVVGLHRPHQAGIDGMKGEGGTLATSIVLSGGYEDDEDN----GDVLVYTGQGGNDLTK   77 (154)
T ss_pred             CCCCCCCC-----EECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC----CCEEEEECCCCCCCCC
T ss_conf             99832876-----88168999984777753378122247898117999986998777778----9789997889976888


Q ss_pred             EECCCCCHHHH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHC-CCCEEEEEEECCCCCHHHHHHCCCCCEEEEEEC
Q ss_conf             11022202578----89988641006776503326777775300-353358896168765455543067000057849
Q gi|254781128|r  153 MSVESADTAKS----TIRNIVANGFLDKVIGVGIEKKLASMLSI-RGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF  225 (225)
Q Consensus       153 msvesadtaks----tirnivangfldkvigvgiekklasmlsi-rgeyryvacydqpwdvskwrekgdftagvvlrf  225 (225)
                        ...+|..-.    .+.+-...+..-.||-   -.|..+-.+- -+-|||--.|.   -+..|+|+|..- ..|.||
T Consensus        78 --~q~~dQ~l~~gNlAL~~S~~~~~PVRViR---g~~~~~~~~p~~~~yrYDGLY~---V~~~w~e~g~~G-~~v~kf  146 (154)
T pfam02182        78 --KQAEDQKLERGNLALANSMRKGNPVRVIR---GEKDASSYAPKGGVYRYDGLYR---VEKYWREKGKSG-FKVFKF  146 (154)
T ss_pred             --CCCCCCCCCHHHHHHHHHHHHCCCEEEEE---EECCCCCCCCCCCCEEECCEEE---EEEEEEEECCCC-CEEEEE
T ss_conf             --74565440025699999987099658997---3025776787788568461889---999998207887-689999


No 6  
>PRK10115 protease 2; Provisional
Probab=37.07  E-value=32  Score=16.10  Aligned_cols=27  Identities=19%  Similarity=0.393  Sum_probs=11.3

Q ss_pred             EECCEEEEECCCCCCEEEECCC-CCCEEEE
Q ss_conf             3232476631777507861112-4320232
Q gi|254781128|r   77 SLNGVSIGLDGQDGTLVYGASL-GVEGFHL  105 (225)
Q Consensus        77 slngvsigldgqdgtlvygasl-gvegfhl  105 (225)
                      +|-++++.-||+  .+.|+.+. |.|-+-+
T Consensus       128 ~l~~~~~SpDg~--~lAys~d~~Gse~~~i  155 (686)
T PRK10115        128 TLGGMAITPDNT--IMALAEDFLSRRQYGL  155 (686)
T ss_pred             EEEEEEECCCCC--EEEEEEECCCCEEEEE
T ss_conf             970389889997--7879982698669999


No 7  
>TIGR01073 pcrA ATP-dependent DNA helicase PcrA; InterPro: IPR005751    The DNA helicase PcrA is found mainly in Gram-positive bacteria and belongs to a superfamily of helicases, together with Rep and UvrD helicases from Escherichia coli. The action of the 3'5' bacterial DNA helicase is based upon two separate but coupled activities, ssDNA translocation and duplex destabilisation, and is driven by energy derived from the continuous ATP-binding and hydrolysis events that take place in the active-site cleft. The resulting conformational changes that accompany these events underpin the coupling process and allow the helicase to translocate along the DNA, destabilising the duplex and separating the two strands in an active process .; GO: 0004003 ATP-dependent DNA helicase activity, 0006268 DNA unwinding during replication, 0005737 cytoplasm.
Probab=34.51  E-value=10  Score=19.08  Aligned_cols=18  Identities=56%  Similarity=0.888  Sum_probs=15.7

Q ss_pred             EEEEECCHHHHHEEECCC
Q ss_conf             113325232100011022
Q gi|254781128|r  140 LIYGFGGARIRNIMSVES  157 (225)
Q Consensus       140 liygfggarirnimsves  157 (225)
                      =||||-||-|+||++-|.
T Consensus       299 SIY~wRGAdi~NIL~FEk  316 (811)
T TIGR01073       299 SIYGWRGADITNILSFEK  316 (811)
T ss_pred             CCHHHHCCHHHHHHHHHH
T ss_conf             500120101563320100


No 8  
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit; InterPro: IPR006274   Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC).   Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain.   Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains .    This entry represents the small subunit of the glutamine-dependent form (6.3.5.5 from EC) of carbamoyl phosphate synthase, CPSase II. The small subunit catalyses the hydrolysis of glutamine to ammonia, which in turn used by the large chain to synthesize carbamoyl phosphate. The C-terminal domain of the small subunit of CPSase has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (6.3.4.16 from EC). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species. ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=32.56  E-value=39  Score=15.59  Aligned_cols=29  Identities=52%  Similarity=0.831  Sum_probs=24.0

Q ss_pred             CCCCCEEEECCCCCCEEEECCCCCCCCCCEEEEEEEEEEEE
Q ss_conf             77750786111243202323557777000123667641012
Q gi|254781128|r   87 GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFT  127 (225)
Q Consensus        87 gqdgtlvygaslgvegfhleprggidgdkvagtllfrtgft  127 (225)
                      =+|||.-.|-|.|-++            .++|-+.|-||.|
T Consensus         5 LeDGt~f~G~sFGa~~------------~~~GE~VFnTgMT   33 (383)
T TIGR01368         5 LEDGTVFEGYSFGAEG------------TVAGEVVFNTGMT   33 (383)
T ss_pred             CCCCCEEEEEEECCCC------------CEEEEEEEECCCC
T ss_conf             1378777888845666------------5488898836897


No 9  
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=29.16  E-value=24  Score=16.90  Aligned_cols=55  Identities=15%  Similarity=0.375  Sum_probs=33.8

Q ss_pred             EEEEEEECCHHH-HHEEECCCCCHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHCCC
Q ss_conf             001133252321-0001102220257889988641006776503-32677777530035
Q gi|254781128|r  138 NTLIYGFGGARI-RNIMSVESADTAKSTIRNIVANGFLDKVIGV-GIEKKLASMLSIRG  194 (225)
Q Consensus       138 ntliygfggari-rnimsvesadtakstirnivangfldkvigv-giekklasmlsirg  194 (225)
                      +.+ .||.|.|+ .+.+..+- ...-.|-.....+||+|.|+-- -+..+|+..|+|.|
T Consensus       248 ~Al-IGFAG~RVIeqTi~~~L-PegFQtaEfllehG~iD~IV~R~~lk~~l~~lL~ih~  304 (305)
T CHL00174        248 NAY-IAFAGKRVIEQTLNKTV-PEGSQAAEYLFHKGLFDLIVPRNLLKGVLSELFQLHG  304 (305)
T ss_pred             CCE-EEECCCHHHHHHHCCCC-CCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHC
T ss_conf             866-76056178888618989-9863226999977997167658999999999998647


No 10 
>KOG4399 consensus
Probab=22.10  E-value=22  Score=17.06  Aligned_cols=58  Identities=28%  Similarity=0.374  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCEEEEEECHHHCCCCCCEEE-EEEEECCEEEEECCCCCCEEE
Q ss_conf             878886520012201476875311487513011011477632211244486155-123323247663177750786
Q gi|254781128|r   20 SGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRL-QNLSLNGVSIGLDGQDGTLVY   94 (225)
Q Consensus        20 sglflgffssaamadygyspqfqptimvsnfakfkglyvaadfskidhqspvrl-qnlslngvsigldgqdgtlvy   94 (225)
                      ..-|--||.|-.|+||.        ..+.||+-.+.-      |+.-.|||||. .|..-|-|+.|   ...++-|
T Consensus       148 e~R~~qFFPS~Q~~~Y~--------~~~D~~~~~~~~------~~~~~q~~~r~~~~i~~~~i~~~---~EE~~~~  206 (325)
T KOG4399         148 ESRICQFFPSFQMLDYQ--------VDYDNHALYKHG------KTGRKQSPVRIFTNIPPNKIILP---TEEGYRF  206 (325)
T ss_pred             HHHHHHHCCHHHHHHHH--------HHHHHHHHHHHC------CCCCCCCHHHHHHCCCCCEEECC---CCCCEEE
T ss_conf             77899867517655440--------003457777612------33224756689752897504346---5124589


No 11 
>TIGR00069 hisD histidinol dehydrogenase; InterPro: IPR001692   Histidinol dehydrogenase (1.1.1.23 from EC) (HDH) catalyses the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine.   In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His . The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules . By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme . A Cys residue has been implicated in the catalytic mechanism of the second oxidative step .   In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast .; GO: 0004399 histidinol dehydrogenase activity, 0000105 histidine biosynthetic process.
Probab=20.72  E-value=27  Score=16.54  Aligned_cols=52  Identities=29%  Similarity=0.510  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHCCCCCCCC-CEEEEEECCHHHCEEEEEECHHHCCCCCCEEEEEEEECC
Q ss_conf             788865200122014768753-114875130110114776322112444861551233232
Q gi|254781128|r   21 GLFLGFFSSAAMADYGYSPQF-QPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNG   80 (225)
Q Consensus        21 glflgffssaamadygyspqf-qptimvsnfakfkglyvaadfskidhqspvrlqnlslng   80 (225)
                      -.|||-||.-++.||.--+.. -||   +.||++-.=---+||.|-     .-+|+||-.|
T Consensus       350 siFLG~ySP~s~GDYaSGTNHVLPT---~GyAr~ySgL~v~dF~K~-----~T~q~lt~eg  402 (435)
T TIGR00069       350 SIFLGEYSPESAGDYASGTNHVLPT---YGYARMYSGLSVEDFLKK-----ITVQELTKEG  402 (435)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCC---CCHHHHCCCCCHHHHHHH-----HHHHCCCHHH
T ss_conf             1354576755545477888765776---541432155322222002-----3141148889


No 12 
>KOG0754 consensus
Probab=20.15  E-value=69  Score=14.12  Aligned_cols=50  Identities=32%  Similarity=0.418  Sum_probs=28.9

Q ss_pred             HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCC
Q ss_conf             321000110222025788998864100677650332677777530035335889616876545554306700
Q gi|254781128|r  147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFT  218 (225)
Q Consensus       147 arirnimsvesadtakstirnivangfldkvigvgiekklasmlsirgeyryvacydqpwdvskwrekgdft  218 (225)
                      -.+||++.+  +.+....+||-+.-|++        .-.+|+++++            |.||.|-|-.|+-.
T Consensus       186 ~~vrn~vP~--~k~~~~~~~~~~i~g~l--------~gtla~~ln~------------pfDVaKsRIQgpqp  235 (294)
T KOG0754         186 YQVRNSVPS--AKDKTLEIRRKLIIGAL--------AGTLACVLNT------------PFDVAKSRIQGPQP  235 (294)
T ss_pred             HHHHHHCCC--CCCCHHHHHHHHHHHHH--------HHHHHHHCCC------------HHHHHHHHCCCCCC
T ss_conf             878761787--65738999999999885--------1021221137------------06776752358999


No 13 
>pfam01828 Peptidase_A4 Peptidase A4 family.
Probab=20.15  E-value=50  Score=14.97  Aligned_cols=32  Identities=31%  Similarity=0.560  Sum_probs=14.2

Q ss_pred             CCCCCCEEEEEEEEEEEEECCCCHHHEEEEEEEE
Q ss_conf             7770001236676410122078501000001133
Q gi|254781128|r  110 GIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYG  143 (225)
Q Consensus       110 gidgdkvagtllfrtgftfdnnnssilqntliyg  143 (225)
                      |||||.-...|| .+|..|.-+| ...+...-|-
T Consensus        46 GIDGdt~~~alL-Q~Gvd~~~~n-G~~sy~AWyE   77 (208)
T pfam01828        46 GIDGDTCSNAIL-QTGVDFYVED-GEVSYDAWYE   77 (208)
T ss_pred             ECCCCCCCCCEE-EEEEEEEECC-CCEEEEEEEE
T ss_conf             426887787537-6169999879-9899989999


Done!