BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781128|ref|YP_003065541.1| hypothetical protein
CLIBASIA_05150 [Candidatus Liberibacter asiaticus str. psy62]
(225 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 225
Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60
MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA
Sbjct: 1 MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60
Query: 61 DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120
DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL
Sbjct: 61 DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120
Query: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180
LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV
Sbjct: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180
Query: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF
Sbjct: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 229
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 132/235 (56%), Gaps = 22/235 (9%)
Query: 2 RDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTI-MVSNFAKFKGLYVAA 60
+D RK F +K++ S LFLGFFSS+AMA + P + S+ K+KG Y++
Sbjct: 6 KDHRKSARIF---SKLLYSSLFLGFFSSSAMAANNSYEYYPPALNYQSSIPKWKGSYISV 62
Query: 61 DFSKI-----DHQSPVRLQNL--SLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDG 113
D + D +R +++ +LN + G D Q+GTLVYGAS+G E H ++
Sbjct: 63 DMANAALVGKDSVGIIRDRSVHAALNKFTFGFDSQEGTLVYGASIGYEN-HFTNGQIVNA 121
Query: 114 --DKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVES-ADTAKSTIRNIVA 170
A +L+ R+GFTFDN NSS+ QNT+IYG G R+R++ S++S AD K +
Sbjct: 122 AFQNSAISLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTK--- 178
Query: 171 NGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
LD+V VGIEKKLASMLS+ EYR V + +S + G G+ LRF
Sbjct: 179 ---LDQVYAVGIEKKLASMLSMHAEYRIVDSINSAMTLSNAKT-GRIVYGLSLRF 229
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 19 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 78
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + + ++ +A
Sbjct: 79 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 130
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 131 V--------LIGAGVEQALSGPLSVKAEYDF 153
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + + ++ +A
Sbjct: 116 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGWEGG 167
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + E+ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKENTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A S SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + ++ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+ +IG G+E+ L+ LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 69 SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
SP + +L G+ +G + Q+G +V+GA L E H GG G + G
Sbjct: 64 SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVG 123
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+ FD TL+YG G + + ++ +A + +IG G+E+
Sbjct: 124 YAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGGV--------LIGAGVEQA 167
Query: 186 LASMLSIRGEYRY 198
L+ LS++ EY +
Sbjct: 168 LSGPLSVKAEYDF 180
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 22/193 (11%)
Query: 12 RNTAKIILSGLFLGFFSSAAMADY-GYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSP 70
R+ + L + F SA AD G + + S + G Y+ A + P
Sbjct: 4 RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGPHDWSGNYIGAQIGASSSKVP 63
Query: 71 VRLQNLS--LNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
N + L GV +G + Q G +V+GA L E H GG G + G
Sbjct: 64 GPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQSWNGNAKGKVG 123
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+ FD TL+YG G + + ++ +A + IG G+E+
Sbjct: 124 YAFDK--------TLVYGTAGYGVTRFKAKDNTTSAPGWEGGAL--------IGAGVEQA 167
Query: 186 LASMLSIRGEYRY 198
L LS++ EY +
Sbjct: 168 LTGPLSVKAEYDF 180
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 136 LQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGE 195
L TL+YG GGA +++ + SA + T A G+ V+G G+E + L+ R E
Sbjct: 135 LDRTLVYGTGGAAFKDLTAKSSAGKDEKT-----AIGY---VVGAGVEHAVTDTLTARLE 186
Query: 196 YRYVACYDQPWDVSKWREKGDFT-----AGVVLRF 225
Y Y DQ +D EK AGV ++F
Sbjct: 187 YLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 39/205 (19%)
Query: 39 PQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVS----IGLDGQDGTLVY 94
P+ P + + + + G +V + S+ D+ +R ++S +GV+ G + QDG+LVY
Sbjct: 45 PESAPPVAIWS-GPYAGTFVGYNVSRFDN---LRGASISGDGVAGGAYAGFNLQDGSLVY 100
Query: 95 GAS--LGVEGFHLEPR---GGID---GDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
G +G GF R G +D V G+L R G D L+YG GG
Sbjct: 101 GVEGDVGGAGFDATRRNALGNLDLSGESNVFGSLRGRVGVDVDP--------FLVYGTGG 152
Query: 147 ARIRNI-MSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQP 205
I +S+ +++++ G+ IG G+E ++ + R EYRY
Sbjct: 153 LAIAETELSLGGVSDSEASV------GY---TIGAGVEAQVTDSIRTRLEYRYSDFGSSD 203
Query: 206 WD-----VSKWREKGDFTAGVVLRF 225
+D VS ++ AGV L F
Sbjct: 204 YDLGRTSVSSGFDEHSVRAGVSLNF 228
>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. BTAi1]
Length = 212
Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 23/169 (13%)
Query: 39 PQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASL 98
P + +++ + G Y+ A + + G ++G + Q G LV+G
Sbjct: 27 PTYTKAPVLAPVQTWTGFYIGAFGGYANEDASTAALKGGFAGGTVGYNWQQGPLVFGLEA 86
Query: 99 GVEGFHLEPRGGIDG-----DKV--AGTLLFRTGFTFDNNNSSILQNTLIYGFGG-ARIR 150
+ GI G D++ GT+ R G+ FD L+YG GG A
Sbjct: 87 DAAWADINATVGIPGVFGLTDRIESTGTVRGRIGYAFDT--------VLLYGTGGYAWGN 138
Query: 151 NIMSVESADTAKSTIRNIVANGFLDK-VIGVGIEKKLASMLSIRGEYRY 198
N +S A S + FL G G+E A S++GEY Y
Sbjct: 139 NKLSATVGGVAGSETK------FLSGWAAGAGVEWMFAPKWSLKGEYLY 181
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 74/193 (38%), Gaps = 22/193 (11%)
Query: 12 RNTAKIILSGLFLGFFSSAAMADY-GYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSP 70
R+ + L + F SA AD G + + + + G YV A + P
Sbjct: 4 RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGPHDWSGNYVGAQVGASSSRVP 63
Query: 71 VRLQNLS--LNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
N + L GV +G + Q G +V+G L E H GG G + G
Sbjct: 64 GPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQSWNGNAKGKVG 123
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+ FD TL+YG G + + ++ +A + +G G+E+
Sbjct: 124 YAFDK--------TLVYGTAGYGVTRFKAKDNTTSAPGWEGGAL--------VGAGVEQA 167
Query: 186 LASMLSIRGEYRY 198
L+ LS++ EY +
Sbjct: 168 LSGPLSVKAEYDF 180
>gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4]
gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4]
Length = 394
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 15 AKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQ 74
A + +S L LG+ S D + S F K GLY A I+ + Q
Sbjct: 22 AGVTISPLLLGYHYSEGADDEQVETTSPAGVGDSGFYKENGLYTGAALG-IELTPSTQFQ 80
Query: 75 NLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSS 134
V G+ DG V AS + F E + I G+ + GT F TG+T DN
Sbjct: 81 ------VEYGVSNTDG--VDPAS--TDSFDAE-QEMISGNFLIGTEQF-TGYT-DNK--- 124
Query: 135 ILQNTLIYGFGGARIR--NIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSI 192
L+ ++ G G ++I+ N E A+T K TI N+ G+G ++ LS+
Sbjct: 125 -LKPYVLVGAGQSKIKIENAAGTEVAET-KDTIGNL----------GLGAMYRINDALSL 172
Query: 193 RGEYRYVACYDQPW 206
RGE R + +D W
Sbjct: 173 RGEARAIHNFDNNW 186
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 29/194 (14%)
Query: 13 NTAKIIL--SGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSP 70
+ AKIIL S L + A AD SP + + G++ F+ + + P
Sbjct: 3 SQAKIILTASALAMCLLGPAMAADL--SPAYNDPPAFQWSGAYVGVHGGTAFTGMPN--P 58
Query: 71 VRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFRTG 125
+N G G + Q G V GA +EG +L + RGG +K G + G
Sbjct: 59 FAGRNGLSGGFQAGYNQQMGPAVLGAE--IEGSYLGGAEHDVRGGKIKEKWRGAAKAKAG 116
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+FD TL++G GG + K N + L ++G GIE+
Sbjct: 117 LSFDQ--------TLLFGTGGVAMTKF--------DKGDKVNGIDGWKLGYLVGGGIEQG 160
Query: 186 LASMLSIRGEYRYV 199
A LS + EY YV
Sbjct: 161 FAGGLSAKVEYDYV 174
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 17 IILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNL 76
+ +GL A AD SP + + G++ F+ + + P +N
Sbjct: 9 VTAAGLAFCLLGPAMAADL--SPTYNDPPAFQWSGAYVGVHGGTAFTGMPN--PFAGRNG 64
Query: 77 SLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFRTGFTFDNN 131
GV G + Q G V GA +EG +L + +GG +K G + G +FD
Sbjct: 65 FSGGVQAGYNQQMGPTVLGAE--IEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFDQ- 121
Query: 132 NSSILQNTLIYGFGGARIRNIM---SVESADTAKSTIRNIVANGFLDKVIGVGIEKKLAS 188
TL++G GG + +V SAD K + ++G GIE+ A
Sbjct: 122 -------TLLFGTGGVALTKFDKGDNVSSADGWK-----------VGYLLGAGIEQGFAG 163
Query: 189 MLSIRGEYRYV 199
LS + EY YV
Sbjct: 164 GLSAKVEYDYV 174
>gi|145595862|ref|YP_001160159.1| methyltransferase type 12 [Salinispora tropica CNB-440]
gi|145305199|gb|ABP55781.1| Methyltransferase type 12 [Salinispora tropica CNB-440]
Length = 201
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 15/84 (17%)
Query: 151 NIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLS----------IRGEYRYVA 200
N+M+ +A T +R I A+ D VI VG LS +R E+R+
Sbjct: 120 NVMTFVAAGTEAEVLRRIAAHLRPDGVIAVGFGTDRGYPLSAFDDDSAAAGLRREHRFAT 179
Query: 201 CYDQPWDVSKWREKGDFTAGVVLR 224
WD+ WRE+ DF ++ R
Sbjct: 180 -----WDLRPWREESDFAVTLLRR 198
>gi|157821815|ref|NP_001101313.1| low density lipoprotein-related protein 1B (deleted in tumors)
[Rattus norvegicus]
gi|149047875|gb|EDM00491.1| low density lipoprotein-related protein 1B (deleted in tumors)
(predicted) [Rattus norvegicus]
Length = 2922
Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 87 GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
G + L+Y G+ G LEPR +D F G F N +I +
Sbjct: 643 GVESFLMYSVHEGIRGISLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDM------ 696
Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK------------KLASMLSIRG 194
+ + A ++ +IV NG L +V G+ I+ L + + G
Sbjct: 697 ----GLNKISRAKRDQTWKEDIVTNG-LGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNG 751
Query: 195 EYRYVAC---YDQPWDVSKWREKG 215
+RYV DQP ++ EKG
Sbjct: 752 SFRYVIISQGLDQPRSIAVHPEKG 775
>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 225
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 123 RTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGI 182
R GF FD LIYG GG N ++ D + + NG+ IG G
Sbjct: 130 RAGFAFDR--------VLIYGTGGYAYLN-GKADTRDVGRQESHSASFNGW---TIGAGA 177
Query: 183 EKKLASMLSIRGEYRYV 199
E L +++RGEYRY
Sbjct: 178 EYALTDNITVRGEYRYA 194
>gi|159479912|ref|XP_001698030.1| hypothetical protein CHLREDRAFT_176872 [Chlamydomonas reinhardtii]
gi|158273829|gb|EDO99615.1| predicted protein [Chlamydomonas reinhardtii]
Length = 338
Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 138 NTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR 197
++Y GGA +++I + S A +T+ GF D ++GVG LA+ RGE+R
Sbjct: 61 KAVVYTTGGA-VQSISWLLSVPGASATVLEAAVPGFGDGIVGVGATCALATFPLKRGEHR 119
Query: 198 -YVACY 202
YVA +
Sbjct: 120 AYVAVH 125
>gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222]
gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222]
Length = 255
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 120 LLFRTGFTFDNNNSSILQNTLIYGFGG-ARIRNIMSVESADTAKSTI---RNIVANGFLD 175
L +TG+ ++ + L+YG G AR V D + ++ R+ +NG+
Sbjct: 148 LRLKTGY-------ALRPDLLLYGIAGIARADVEYKVAGTDGSGGSMSESRDFKSNGY-- 198
Query: 176 KVIGVGIEKKLASMLSIRGEYRYV 199
++G+G+E+KL+ +S+ GEY Y
Sbjct: 199 -IVGLGVERKLSDRMSVTGEYEYA 221
>gi|309365907|emb|CAP22695.2| hypothetical protein CBG_01421 [Caenorhabditis briggsae AF16]
Length = 356
Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 11 FRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMV 47
+++T +IIL G+ + FF SAA Y Y F PT+ V
Sbjct: 238 YKSTRQIILQGVVMCFFHSAAACIYEYMAYFTPTLYV 274
>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 226
Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 78 LNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVA------GTLLFRTGF 126
L GV IG + Q + V G V G + E G+ GD+ GTL R G+
Sbjct: 74 LGGVQIGYNYQINSAVLGVEADVSGADIKGHSDEITSGL-GDRYDTKVDWFGTLRARAGY 132
Query: 127 TFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKL 186
FD TLIYG GG ++ + D T N + IG G+E+ +
Sbjct: 133 AFDR--------TLIYGTGGLAFGSVEN-RYVDGPFDTFSE--KNTKVGWTIGAGLEQAI 181
Query: 187 ASMLSIRGEYRYVACYDQPWDVS 209
S + EY+YV DQ D +
Sbjct: 182 TDHWSAKFEYQYVDLRDQTIDYA 204
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 75 NLSLNGVSIGLDGQ-DGTLV---YGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDN 130
NL LN +GL+G DGT + Y + V GF + + G++ R G+ +D
Sbjct: 88 NLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHTSADIQGSIRGRVGYAWDR 147
Query: 131 NNSSILQNTLIYGFGG---ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLA 187
L+Y GG A ++ +S + + ST + + +G G+E +
Sbjct: 148 --------VLVYATGGVAFAGVKASLSTPFSYDSSSTTK-------VGWTVGGGLEYAVT 192
Query: 188 SMLSIRGEYRY 198
+ SIR EYRY
Sbjct: 193 NNWSIRAEYRY 203
>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 40/203 (19%)
Query: 34 DYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ-SPVRLQNLSLNGVSIGLDGQDGTL 92
DYG P F + G YV A + SP+ GV G + Q G+
Sbjct: 36 DYGNQPAFS----------WSGAYVGAHGGVASPKFSPLASGRGLTGGVQAGYNFQFGSG 85
Query: 93 VYGASLGVEGFHLE-----PRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGA 147
V GA VEG +L P G + ++ G + G D+ TL+YG G
Sbjct: 86 VVGAE--VEGSYLGNDARVPNGRLR-ERFRGAAKLKAGVALDH--------TLLYGTAG- 133
Query: 148 RIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWD 207
+ + + D T + G+L +G G+E+ LS + EY YV+ +
Sbjct: 134 ----LTTTKFKDGNGVTGPDGWKQGYL---VGAGVEQSFGGGLSAKFEYNYVSTGNVATT 186
Query: 208 VSKWREKGDFT-----AGVVLRF 225
S R K D + AG+ RF
Sbjct: 187 TSSGRSKTDVSDHVIKAGLNYRF 209
>gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 230
Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 118 GTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKV 177
GTL R G+ +DN TL YG GG +I S D S + G+ V
Sbjct: 129 GTLRPRVGYAYDN--------TLFYGTGGLAYGHIDYKGSLDGVGSFSEDKTKAGW---V 177
Query: 178 IGVGIEKKLASMLSIRGEYRYV 199
+G G+E ++ + EY+YV
Sbjct: 178 LGAGVEHAFTDNVTAKLEYQYV 199
>gi|254511265|ref|ZP_05123332.1| pe-pgrs family protein [Rhodobacteraceae bacterium KLH11]
gi|221534976|gb|EEE37964.1| pe-pgrs family protein [Rhodobacteraceae bacterium KLH11]
Length = 816
Score = 34.7 bits (78), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 61 DFSKIDHQSPVRLQNLSLNGVSIGLDG----QDGTLVYGASLGVEGFHLEPRGGIDG 113
DFS I++Q+ N SL+GVS+ DG Q G G++ EG E GG G
Sbjct: 168 DFSSINNQAATLNDNDSLSGVSLSNDGGTFTQSGNATGGSAHAEEGIDAEADGGASG 224
>gi|153792247|ref|NP_443737.2| low-density lipoprotein receptor-related protein 1B precursor [Mus
musculus]
Length = 4599
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 87 GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
G + L+Y G+ G LEPR +D F G F N +I +
Sbjct: 1876 GIESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDM------ 1929
Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK------------KLASMLSIRG 194
+ + A ++ ++V NG L +V G+ ++ L + + G
Sbjct: 1930 ----GLNKISRAKRDQTWKEDVVTNG-LGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNG 1984
Query: 195 EYRYVAC---YDQPWDVSKWREKG 215
+RYV DQP ++ EKG
Sbjct: 1985 SFRYVIISQGLDQPRSIAVHPEKG 2008
>gi|122889566|emb|CAM14705.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|122889821|emb|CAM13911.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123123495|emb|CAM18781.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123229420|emb|CAM16974.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123230906|emb|CAM19295.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123231332|emb|CAM15516.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123232169|emb|CAM21046.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123232842|emb|CAM23456.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123233867|emb|CAM26000.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123234147|emb|CAM24764.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123286577|emb|CAM24097.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
gi|123858251|emb|CAM20080.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
Length = 4630
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 87 GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
G + L+Y G+ G LEPR +D F G F N +I +
Sbjct: 1907 GIESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDM------ 1960
Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK------------KLASMLSIRG 194
+ + A ++ ++V NG L +V G+ ++ L + + G
Sbjct: 1961 ----GLNKISRAKRDQTWKEDVVTNG-LGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNG 2015
Query: 195 EYRYVAC---YDQPWDVSKWREKG 215
+RYV DQP ++ EKG
Sbjct: 2016 SFRYVIISQGLDQPRSIAVHPEKG 2039
>gi|46577126|sp|Q9JI18|LRP1B_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 1B;
Short=LRP-1B; AltName: Full=Low-density lipoprotein
receptor-related protein-deleted in tumor; Short=LRP-DIT;
Flags: Precursor
gi|8926243|gb|AAF81758.1|AF270884_1 low density lipoprotein receptor related protein LRP1B/LRP-DIT [Mus
musculus]
Length = 4599
Score = 34.7 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 87 GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
G + L+Y G+ G LEPR +D F G F N +I +
Sbjct: 1876 GIESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDM------ 1929
Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK------------KLASMLSIRG 194
+ + A ++ ++V NG L +V G+ ++ L + + G
Sbjct: 1930 ----GLNKISRAKRDQTWKEDVVTNG-LGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNG 1984
Query: 195 EYRYVAC---YDQPWDVSKWREKG 215
+RYV DQP ++ EKG
Sbjct: 1985 SFRYVIISQGLDQPRSIAVHPEKG 2008
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 225
Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats.
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60
MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA
Sbjct: 1 MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60
Query: 61 DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120
DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL
Sbjct: 61 DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120
Query: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180
LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV
Sbjct: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180
Query: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF
Sbjct: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 229
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 132/235 (56%), Gaps = 22/235 (9%)
Query: 2 RDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTI-MVSNFAKFKGLYVAA 60
+D RK F +K++ S LFLGFFSS+AMA + P + S+ K+KG Y++
Sbjct: 6 KDHRKSARIF---SKLLYSSLFLGFFSSSAMAANNSYEYYPPALNYQSSIPKWKGSYISV 62
Query: 61 DFSKI-----DHQSPVRLQNL--SLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDG 113
D + D +R +++ +LN + G D Q+GTLVYGAS+G E H ++
Sbjct: 63 DMANAALVGKDSVGIIRDRSVHAALNKFTFGFDSQEGTLVYGASIGYEN-HFTNGQIVNA 121
Query: 114 --DKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVES-ADTAKSTIRNIVA 170
A +L+ R+GFTFDN NSS+ QNT+IYG G R+R++ S++S AD K +
Sbjct: 122 AFQNSAISLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTK--- 178
Query: 171 NGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
LD+V VGIEKKLASMLS+ EYR V + +S + G G+ LRF
Sbjct: 179 ---LDQVYAVGIEKKLASMLSMHAEYRIVDSINSAMTLSNAKT-GRIVYGLSLRF 229
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 23 FLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ--SPVRLQNLSLNG 80
F G +A M + P + + G YV A + SP + +L G
Sbjct: 18 FAGSAFAADMMGGTDYTYYDPV--AAGPHDWSGNYVGAQVGGSSSKFPSPFASRTGALGG 75
Query: 81 VSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQ 137
+ +G + Q+G +V+GA L E H GG G + G+TFD
Sbjct: 76 IVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFD-------- 127
Query: 138 NTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR 197
TL+YG G + ++ D +T + G L IG G+E+ L+ LS++ EY
Sbjct: 128 KTLVYGTAGY---GVTRFKAKD--NTTSASGCEGGVL---IGAGVEQALSGPLSVKAEYD 179
Query: 198 Y 198
+
Sbjct: 180 F 180
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 44.2 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 19 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 78
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + ++ D +T +
Sbjct: 79 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGY---GVTRFKAKD--NTTSAS 125
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
G L IG G+E+ L+ LS++ EY +
Sbjct: 126 GCEGGVL---IGAGVEQALSGPLSVKAEYDF 153
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 43.9 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + ++ D +T +
Sbjct: 116 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGY---GVTRFKAKD--NTTSAS 162
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
G L IG G+E+ L+ LS++ EY +
Sbjct: 163 GWEGGVL---IGAGVEQALSGPLSVKAEYDF 190
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 43.5 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + ++ D +T +
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGY---GVTRFKAKD--NTTSAS 152
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
G L IG G+E+ L+ LS++ EY +
Sbjct: 153 GCEGGVL---IGAGVEQALSGPLSVKAEYDF 180
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 43.1 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+TFD TL+YG G + ++ D +T +
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGY---GVTRFKAKD--NTTSAS 152
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
G L IG G+E+ L+ LS++ EY +
Sbjct: 153 GWEGGVL---IGAGVEQALSGPLSVKAEYDF 180
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 22/193 (11%)
Query: 12 RNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFA-KFKGLYVAADFSKIDHQ-- 68
R+ + L + F SA AD + + V++ + G Y+ A +
Sbjct: 4 RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGPHDWSGNYIGAQIGASSSKVP 63
Query: 69 SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
P + +L GV +G + Q G +V+GA L E H GG G + G
Sbjct: 64 GPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQSWNGNAKGKVG 123
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+ FD TL+YG G + ++ D +IG G+E+
Sbjct: 124 YAFD--------KTLVYGTAGY---GVTRFKAKDN-----TTSAPGWEGGALIGAGVEQA 167
Query: 186 LASMLSIRGEYRY 198
L LS++ EY +
Sbjct: 168 LTGPLSVKAEYDF 180
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 42.3 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 23/181 (12%)
Query: 23 FLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ--SPVRLQNLSLNG 80
F G +A M P + + G YV A + SP + +L G
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPV--AAGLHDWSGNYVGAQVGGSSSKFPSPFASRTGALGG 75
Query: 81 VSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQ 137
+ +G + Q+G +V+GA L E H GG G + G+ FD
Sbjct: 76 IVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFD-------- 127
Query: 138 NTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR 197
TL+YG G + ++ D +IG G+E+ L+ LS++ EY
Sbjct: 128 KTLVYGTAGY---GVTRFKAKDN-----TTSAPGWEGGVLIGAGVEQALSGPLSVKAEYD 179
Query: 198 Y 198
+
Sbjct: 180 F 180
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 41.2 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 159
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 160 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 190
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 41.2 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + + E+ +A
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKENTTSAP----- 152
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
G L IG G+E+ L+ LS++ EY +
Sbjct: 153 GWEGGVL---IGAGVEQALSGPLSVKAEYDF 180
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 41.2 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 159
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 160 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 190
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 41.2 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 56 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 159
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 160 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 190
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 41.2 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 41.2 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 81/226 (35%), Gaps = 36/226 (15%)
Query: 13 NTAKIILSGLFLGF-FSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKI--DHQS 69
+ AKIIL+ L AMA P + G YV +
Sbjct: 3 SQAKIILTASALAMCLLGPAMAADLSPAYNDPPAFQ-----WSGAYVGVHGGTAFTGMPN 57
Query: 70 PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFRT 124
P +N G G + Q G V GA + EG +L + RGG +K G +
Sbjct: 58 PFAGRNGLSGGFQAGYNQQMGPAVLGAEI--EGSYLGGAEHDVRGGKIKEKWRGAAKAKA 115
Query: 125 GFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK 184
G +FD TL++G GG + K N + L ++G GIE+
Sbjct: 116 GLSFDQ--------TLLFGTGGVAMTKFD--------KGDKVNGIDGWKLGYLVGGGIEQ 159
Query: 185 KLASMLSIRGEYRYVACYDQPWDVSKWREKG-----DFTAGVVLRF 225
A LS + EY YV + + K + AG+ RF
Sbjct: 160 GFAGGLSAKVEYDYVRTPGVETTSALGKSKATIGSHELKAGINYRF 205
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 53 FKGLYVAADFSKIDHQ--SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
+ G YV A + SP + +L G+ +G + Q+G +V+GA L E H
Sbjct: 46 WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105
Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
GG G + G+ FD TL+YG G + ++ D
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGY---GVTRFKAKDN-----TT 149
Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
+IG G+E+ L+ LS++ EY +
Sbjct: 150 SAPGWEGGVLIGAGVEQALSGPLSVKAEYDF 180
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 23/181 (12%)
Query: 23 FLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ--SPVRLQNLSLNG 80
F G +A M P + + G YV + SP + +L G
Sbjct: 18 FAGSAFAADMMGRTDYTYNDPV--AAGPHDWSGNYVGTQVGGSSSKFPSPFASRTGALGG 75
Query: 81 VSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQ 137
+ +G + Q+G +V+GA L E H GG G + G+ FD
Sbjct: 76 IVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFD-------- 127
Query: 138 NTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR 197
TL+YG G + ++ D +IG G+E+ L+ LS++ EY
Sbjct: 128 KTLVYGTAGY---GVTRFKAKDN-----TTSAPGWEGGVLIGAGVEQALSGPLSVKAEYD 179
Query: 198 Y 198
+
Sbjct: 180 F 180
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 22/193 (11%)
Query: 12 RNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFA-KFKGLYVAADFSKIDHQ-- 68
R+ + L + F SA AD + + V+ + G YV A +
Sbjct: 4 RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGPHDWSGNYVGAQVGASSSRVP 63
Query: 69 SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
P + +L GV +G + Q G +V+G L E H GG G + G
Sbjct: 64 GPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQSWNGNAKGKVG 123
Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
+ FD TL+YG G + ++ D ++G G+E+
Sbjct: 124 YAFD--------KTLVYGTAGY---GVTRFKAKDN-----TTSAPGWEGGALVGAGVEQA 167
Query: 186 LASMLSIRGEYRY 198
L+ LS++ EY +
Sbjct: 168 LSGPLSVKAEYDF 180
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 38/215 (17%)
Query: 28 SSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVS----I 83
S A D P + S + G +V + S+ D+ +R ++S +GV+
Sbjct: 35 SETAFPDSRIPESAPPVAIWSG--PYAGTFVGYNVSRFDN---LRGASISGDGVAGGAYA 89
Query: 84 GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDG------DKVAGTLLFRTGFTFDNNNSSI 135
G + QDG+LVYG +G GF R + V G+L R G D
Sbjct: 90 GFNLQDGSLVYGVEGDVGGAGFDATRRNALGNLDLSGESNVFGSLRGRVGVDVD------ 143
Query: 136 LQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGE 195
L+YG GG I A+T S + + IG G+E ++ + R E
Sbjct: 144 --PFLVYGTGGLAI--------AETELSLGGVSDSEASVGYTIGAGVEAQVTDSIRTRLE 193
Query: 196 YRYVACYDQPWDVSKWREKGDF-----TAGVVLRF 225
YRY +D+ + F AGV L F
Sbjct: 194 YRYSDFGSSDYDLGRTSVSSGFDEHSVRAGVSLNF 228
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 37.3 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 23/203 (11%)
Query: 17 IILSGLFLGFFSSAAMADY-GYSPQFQPTI-MVSNFAKFKGLYV--AADFSKIDHQSPVR 72
++ S L + A AD P+ + M + + + G YV A ++
Sbjct: 8 LLASSAGLSLVTGAHAADAVMSVPEAPAAVDMPAPVSNWAGAYVGGAGTYTMGRSHGSKF 67
Query: 73 LQNLSLNGVSIGLDGQDGTLVYG--ASLGVEGFHLEPRGGIDG-DKVAGTLLFRTGFTFD 129
V G + Q+ +VYG A +G +G G++G V G++ R G+
Sbjct: 68 SARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQGVNGSIRGRVGYD-- 125
Query: 130 NNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASM 189
L ++YG G V +ADT S + L +G G+E + +
Sbjct: 126 ------LNPFMVYGTAG--------VAAADTKISGAGGSDSKAALGYTVGAGVEAMVTNN 171
Query: 190 LSIRGEYRYVACYDQPWDVSKWR 212
++ R EYRY ++ +++ +
Sbjct: 172 ITTRVEYRYTDYQNKDYNIGGSK 194
>gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 220
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 79/221 (35%), Gaps = 34/221 (15%)
Query: 24 LGFF--SSAAMADYGYSPQFQPTIMVSNFA--KFKGLYVAADFSKIDHQSPVRLQNLSLN 79
LG F S A A S + ++ + G Y + + ++L ++
Sbjct: 15 LGLFALSGTAYAADVVSEEPPAPAPIAELPVASWAGPYAGLNVGYGFS-GHTKEKDLGVD 73
Query: 80 GVSIGLDG-----------QDGTLVYGAS--LGVEGFHLEPRGGIDGDKVAGTLLFRTGF 126
V +G G Q VYGA LG G + G G+L R G+
Sbjct: 74 NVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYNGVKGDDSGVNSKAGFEGSLRARLGY 133
Query: 127 TFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKL 186
++ L+YG GG R S++ D + L G+G + KL
Sbjct: 134 -------AVTPEILLYGTGGLAGR---SLKVED----DVYGSDRATLLGWTAGLGTDIKL 179
Query: 187 ASMLSIRGEYRYVACYDQPWD-VSKWR-EKGDFTAGVVLRF 225
+ R EYRY + +D + K + T GV ++F
Sbjct: 180 TDNVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 220
>gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 218
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 17/146 (11%)
Query: 84 GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLI 141
G Q VYG A LG G + G G+L R G+ ++ L+
Sbjct: 86 GYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGFEGSLRARLGY-------AVTPEILL 138
Query: 142 YGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVAC 201
YG GG R S++ DT + L GVG + KL + R EYRY
Sbjct: 139 YGTGGLAGR---SLKVEDTV---LGVSDRATMLGWTAGVGTDIKLTDNVFGRVEYRYTDF 192
Query: 202 YDQPWD-VSKWR-EKGDFTAGVVLRF 225
+ +D + K + T GV ++F
Sbjct: 193 GSKSFDGIGKVKATDNRVTFGVGMKF 218
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 57 YVAADFSKIDHQSPVRLQNLSLNGVSIGLDGQDG-TLVYGASLGVEGFHLEPRG-GIDGD 114
+++AD + QN GV G + ++V GA ++ LE + G++
Sbjct: 61 FLSADGKSGASGALDDDQNGVTAGVHAGYNFMVAPSVVLGAEADIQYNDLEEKSAGVELQ 120
Query: 115 KV-AGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGF 173
T+ R G+ D TL+YG GGA +++ + SA + T
Sbjct: 121 SDWNATVRARAGYALDR--------TLVYGTGGAAFKDLTAKSSAGKDEKT--------A 164
Query: 174 LDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDF-----TAGVVLRF 225
+ V+G G+E + L+ R EY Y DQ +D EK AGV ++F
Sbjct: 165 IGYVVGAGVEHAVTDTLTARLEYLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 36.1 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 37/195 (18%)
Query: 16 KIILSGLFLGF-FSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKI--DHQSPVR 72
KI+++ L F AMA P + G YV +P
Sbjct: 6 KIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQ-----WSGAYVGVHGGTAFTGMPNPFA 60
Query: 73 LQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFRTGFT 127
+N GV G + Q G V GA + EG +L + +GG +K G + G +
Sbjct: 61 GRNGFSGGVQAGYNQQMGPTVLGAEI--EGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLS 118
Query: 128 FDNNNSSILQNTLIYGFGGARIRNIM---SVESADTAKSTIRNIVANGFLDKVIGVGIEK 184
FD TL++G GG + +V SAD K + ++G GIE+
Sbjct: 119 FDQ--------TLLFGTGGVALTKFDKGDNVSSADGWK-----------VGYLLGAGIEQ 159
Query: 185 KLASMLSIRGEYRYV 199
A LS + EY YV
Sbjct: 160 GFAGGLSAKVEYDYV 174
>gi|167753671|ref|ZP_02425798.1| hypothetical protein ALIPUT_01952 [Alistipes putredinis DSM 17216]
gi|167658296|gb|EDS02426.1| hypothetical protein ALIPUT_01952 [Alistipes putredinis DSM 17216]
Length = 323
Score = 36.1 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 11/157 (7%)
Query: 50 FAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLE--- 106
F+ L V+AD + + L L+ + + G L +LG +
Sbjct: 131 IEAFRPLSVSADLAYSYRIG----RYLGLSVTARYIRSSYGELFTNNALGFDVAAYARIP 186
Query: 107 -PRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTI 165
R AG + GFTFD++N + + G A IR+ S+E++
Sbjct: 187 LNRMLEGAWVSAGAKISDFGFTFDDSNYDLPTKFSVGGSLFAPIRDSHSLEASVDLGYRY 246
Query: 166 RNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACY 202
+ F +G+G+E L M+++RG Y +
Sbjct: 247 SSSENKSF---GMGIGVEYVLMQMIAVRGGYHVADSH 280
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 84 GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLI 141
G + Q G +VYG + LG G + G + G++ R G+ + L+
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNP--------FLL 130
Query: 142 YGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVAC 201
YG G I D S + + +G G+E + + ++ R EYRY
Sbjct: 131 YGTAGLAI--------GDVKVSDDTSDESKTNFGYTVGAGVEAFVTNNITTRLEYRYTDY 182
Query: 202 YDQPWDV 208
+ +D+
Sbjct: 183 QSKDYDL 189
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 84 GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLI 141
G + Q G +VYG + LG G + G + G++ R G+ + L+
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNP--------FLL 130
Query: 142 YGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVAC 201
YG G I D S + + +G G+E + + ++ R EYRY
Sbjct: 131 YGTAGLAI--------GDVKVSDDTSDESKTNFGYTVGAGVEAFVTNNITTRLEYRYTDY 182
Query: 202 YDQPWDV 208
+ +D+
Sbjct: 183 QSKDYDL 189
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 35.4 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 84 GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLI 141
G + Q G +VYG + LG G + G + G++ R G+ + L+
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNP--------FLL 130
Query: 142 YGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVAC 201
YG G I D S + + +G G+E + + ++ R EYRY
Sbjct: 131 YGTAGLAI--------GDVKVSDDTSDESKTNFGYTVGAGVEAFVTNNITTRLEYRYTDY 182
Query: 202 YDQPWDV 208
+ +D+
Sbjct: 183 QSKDYDL 189
>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
magnetotacticum MS-1]
Length = 693
Score = 35.0 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 72 RLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-------EPRGGIDGDKVAGTLLFRT 124
R +L G+ G Q G VYG V+ +L P G +G A ++
Sbjct: 77 RNATTALGGLFGGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPAFPVIRAK 136
Query: 125 GFTFDNNNSSI---LQNTLIY---GFGGARIRNIMSV-ESADTAKSTIRNIVANGFLDKV 177
F + + + L+Y G GA++R + + + A T+ +R A FL
Sbjct: 137 ADVFGTARARVGYAFERYLVYASFGLAGAQVRFLTNFPDPATTSAPALRRGRA--FLGFS 194
Query: 178 IGVGIEKKLASMLSIRGEYRYVA 200
+G GIE + L++ EYRY+
Sbjct: 195 LGAGIEYAITEHLALGLEYRYLD 217
>gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
Length = 217
Score = 35.0 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 68/199 (34%), Gaps = 27/199 (13%)
Query: 39 PQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVSIGLDG--------QDG 90
P + A + G Y + + ++L + G G Q
Sbjct: 34 PPAPAPVAELPVASWAGPYAGINLGYGFS-GRTKEKDLGFETDTKGFVGSVFGGYQWQQE 92
Query: 91 TLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGAR 148
VYG A LG G + G G+L R G+ ++ L+YG GG
Sbjct: 93 NFVYGGEAELGYNGVKGDDNGVHSKGGFEGSLRARLGY-------AVTPEILLYGTGGLA 145
Query: 149 IRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWD- 207
R S++ D L G+G + KL + R EYRY + +D
Sbjct: 146 GR---SLKVED----DTFGSDTATMLGWTAGLGTDIKLTDNVFGRVEYRYTDFGSKSFDN 198
Query: 208 VSKWR-EKGDFTAGVVLRF 225
+ K + T G+ ++F
Sbjct: 199 IGKVKATDNRVTFGLGMKF 217
>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
Length = 353
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 12/206 (5%)
Query: 31 AMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVSIG-LDGQD 89
A+A + T V A + + + +K ++P N V+ G G
Sbjct: 14 AVASVAQAAPQPNTFYVGAKAGWASFHDGLNQAKY-LEAPEATFGFKRNSVTYGVFGGYQ 72
Query: 90 GTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFD---NNNSSILQNTLIYGFGG 146
T + LG + F + D+ A + T + +L +Y G
Sbjct: 73 ITDDFAVELGYDDFGRAKLRIAETDQKARDVAKHTNHGAHLSLKASYPVLDGLDVYARVG 132
Query: 147 ARI--RNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQ 204
A + + + +D AK + + V G+E L++R EY++V +
Sbjct: 133 AALIRSDYKVYDHSDPAKLPQLKRTHSTQVSPVFAGGLEYAFMPELALRVEYQWVNNVGK 192
Query: 205 PWDVSKWR-----EKGDFTAGVVLRF 225
DV R + G TAG+ RF
Sbjct: 193 LKDVDGNRVDYRPDIGSVTAGLSYRF 218
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.322 0.138 0.366
Lambda K H
0.267 0.0426 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,959,519,521
Number of Sequences: 14124377
Number of extensions: 156261151
Number of successful extensions: 362504
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 362421
Number of HSP's gapped (non-prelim): 202
length of query: 225
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 91
effective length of database: 2,950,127,112
effective search space: 268461567192
effective search space used: 268461567192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)