HHSEARCH alignment of GI: 254781130 and SCOP domain: d1nkpb_

Alignment

Probab=91.01  E-value=0.51  Score=24.48  Aligned_cols=60  Identities=10%  Similarity=0.089  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88876633441067660313677759999999999999999999999999999999999987555
Q gi|254781130|r  308 NNLKEINEVFVDTIGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQDMSNTPL  372 (378)
Q Consensus       308 qev~~v~p~~v~~~~~~~~~~~~~l~~~li~aiqel~~~i~~l~~~i~~~~~~~~~l~~~~~~~~  372 (378)
                      .++..++|..-.     ...+-..+.-..++=|++|.+++..|+++++++.++...|+..+..+.
T Consensus        22 ~~L~~llP~~~~-----~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~   81 (83)
T d1nkpb_          22 HSLRDSVPSLQG-----EKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG   81 (83)
T ss_dssp             HHHHTTSGGGTT-----SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999997577789-----988899999999999999999999999999999999999999998727

SCOP domain information

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Max protein
species: Human (Homo sapiens) [TaxId: 9606]