RPS-BLAST 2.2.22 [Sep-27-2009]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= gi|254781132|ref|YP_003065545.1| hypothetical protein
CLIBASIA_05170 [Candidatus Liberibacter asiaticus str. psy62]
(31 letters)
***** No hits found ******
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.130 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 109,467
Number of extensions: 1940
Number of successful extensions: 5
Number of sequences better than 10.0: 0
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 0
Length of query: 31
Length of database: 2,407,596
Length adjustment: 5
Effective length of query: 26
Effective length of database: 2,338,946
Effective search space: 60812596
Effective search space used: 60812596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)