HHsearch results for GI: 254781133 and protein with PDBid: 3g8w_A
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, structural genomics, PSI-2, protein structure initiative; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=99.46 E-value=1.7e-12 Score=90.49 Aligned_cols=117 Identities=13% Similarity=0.174 Sum_probs=87.6
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCC--CCE-EEEC-CCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99999972001148785499998257607679999998346783--113-6863-7766035999999999862486507
Q gi|254781133|r 22 ADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPISRV--IEL-SGAS-DCKSWLSRSVLKEIYSYPWNQLCCQ 97 (159)
Q Consensus 22 ~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~~~--~ei-g~~~-~~~~~~~~ea~~~l~~~aF~~l~l~ 97 (159)
..++...+... ......+++..+|++||.+++...+..... +++ ++.. .++.|+|+.++..+++++++ .+++
T Consensus 41 ~~~~~~~~~~~---~~~~~~~~~~~~~~lVG~~~~~~~~~~~~~~~~~i~~v~~~~rg~Gig~~l~~~~~~~~~~-~~~~ 116 (169)
T 3g8w_A 41 IDRLKTILSNH---TDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKE-QNIE 116 (169)
T ss_dssp HHHHHHHHSTT---CTTEEEEEEESSSCEEEEEEEEECCSTTTTTEEEEEEEEEGGGCHHHHHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHHCC---CCCEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCC
T ss_conf 99999997378---8833999999999999999975147766564899999998446797749999999999875-1534
Q ss_pred EEEEEEECCCCHHHHHHHHCCCEEEEEECC----CCCEEEEEEEEECHH
Q ss_conf 999998264215899998749589667612----894100799986288
Q gi|254781133|r 98 AVIHRIPDEDYPQHRMLTSLGGIRYRIPRL----RGRNAAENIYVITHE 142 (159)
Q Consensus 98 Ri~~~~~~~N~~S~rv~eklGF~~egv~R~----~G~~~d~~v~~l~~~ 142 (159)
+|.+.|.+.|.+|+++++|+||+.+|+.+. .|++.|++.|....+
T Consensus 117 ~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~g~~~D~~~m~~~~~ 165 (169)
T 3g8w_A 117 TLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTT 165 (169)
T ss_dssp EEEEEEETTCHHHHHHHHTTTCEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEEEEECC
T ss_conf 6898852287999999998899999998236999999998328168845