Query gi|254781135|ref|YP_003065548.1| hypothetical protein CLIBASIA_05185 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 83
No_of_seqs 19 out of 21
Neff 3.1
Searched_HMMs 13730
Date Wed Jun 1 11:32:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781135.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ppya_ b.52.2.1 (A:) Pyruvoyl 24.2 22 0.0016 15.0 2.4 33 2-34 51-83 (118)
2 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 14.6 38 0.0028 13.7 1.8 32 2-34 50-81 (121)
3 d1kfwa2 d.26.3.1 (A:328-388) P 11.2 40 0.0029 13.6 1.1 11 26-36 48-58 (61)
4 d2po6a2 d.19.1.1 (A:6-183) CD1 7.4 44 0.0032 13.4 0.1 26 14-40 105-130 (178)
5 d1ni5a4 d.229.1.1 (A:227-314) 7.2 72 0.0052 12.2 1.4 16 58-73 73-88 (88)
6 d1onca_ d.5.1.1 (A:) Amphibian 6.6 60 0.0043 12.6 0.4 19 15-34 83-101 (104)
7 d1qk1a2 d.128.1.2 (A:103-379) 6.0 84 0.0061 11.8 2.7 21 10-30 110-130 (277)
8 d1qh4a2 d.128.1.2 (A:103-381) 5.9 84 0.0061 11.8 2.6 21 11-31 116-136 (279)
9 d1m15a2 d.128.1.2 (A:96-357) A 5.8 86 0.0063 11.7 2.6 21 11-31 116-136 (262)
10 d2ad6b1 a.137.2.1 (B:1-69) Met 5.5 83 0.0061 11.8 0.6 9 31-39 1-9 (69)
No 1
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=24.21 E-value=22 Score=15.03 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=27.0
Q ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCEEECCC
Q ss_conf 777088999727996099995187852256486
Q gi|254781135|r 2 KSGEWVTFQYTTPDKTFLIALNGQDERQIYNGN 34 (83)
Q Consensus 2 s~g~W~~vq~tT~Gg~fL~~~NG~D~~~~ynGT 34 (83)
.|.||+..-+.-+-||=.+++||+-|++.--|-
T Consensus 51 NG~Rf~TYvI~g~~gSg~I~lNGaAAr~~~~GD 83 (118)
T d1ppya_ 51 NGKRFSTYAIAAERGSRIISVNGAAAHCASVGD 83 (118)
T ss_dssp TCCEEEEEEEEECTTCCCEECTTTTGGGCCTTC
T ss_pred CCCEEEEEEEECCCCCCEEEECCHHHEECCCCC
T ss_conf 993899899875789877996683431549999
No 2
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=14.60 E-value=38 Score=13.70 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=22.5
Q ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCEEECCC
Q ss_conf 777088999727996099995187852256486
Q gi|254781135|r 2 KSGEWVTFQYTTPDKTFLIALNGQDERQIYNGN 34 (83)
Q Consensus 2 s~g~W~~vq~tT~Gg~fL~~~NG~D~~~~ynGT 34 (83)
.|.||+..-+.-+++. .+++||+-|++.--|-
T Consensus 50 NG~Rf~TYvI~g~~sg-~I~lNGAAA~~~~~GD 81 (121)
T g1uhe.1 50 NGERFSTYVILGKKRG-EICVNGAAARKVAIGD 81 (121)
T ss_dssp TCCEEEEECEEECSTT-CEEEEGGGGGGCCTTC
T ss_pred CCEEEEEEEEECCCCC-EEEECCHHHEECCCCC
T ss_conf 9938876898438888-7985585642348999
No 3
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]}
Probab=11.20 E-value=40 Score=13.56 Aligned_cols=11 Identities=18% Similarity=0.347 Sum_probs=4.4
Q ss_pred CCCEEECCCCC
Q ss_conf 85225648642
Q gi|254781135|r 26 DERQIYNGNNC 36 (83)
Q Consensus 26 D~~~~ynGTtW 36 (83)
-+|.+|||++|
T Consensus 48 ~a~Y~y~g~~w 58 (61)
T d1kfwa2 48 GSAWRYDGTQW 58 (61)
T ss_dssp TEEEEECSSCE
T ss_pred CEEEEEECCEE
T ss_conf 57679869999
No 4
>d2po6a2 d.19.1.1 (A:6-183) CD1, alpha-1 and alpha-2 domains {Human (Homo sapiens), CD1d [TaxId: 9606]}
Probab=7.44 E-value=44 Score=13.36 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=20.1
Q ss_pred CCCEEEEEECCCCCCEEECCCCCCCCC
Q ss_conf 996099995187852256486424644
Q gi|254781135|r 14 PDKTFLIALNGQDERQIYNGNNCKSSL 40 (83)
Q Consensus 14 ~Gg~fL~~~NG~D~~~~ynGTtWt~~~ 40 (83)
..|.+-++.||.|-.. ||..+|+.++
T Consensus 105 ~~gf~q~ayDG~Dfls-fd~~tw~~~~ 130 (178)
T d2po6a2 105 SNNFFHVAFQGKDILS-FQGTSWEPTQ 130 (178)
T ss_dssp EEEEEEEEETTEEEEE-EETTEEEECT
T ss_pred CEEEEEEEECCEEEEE-ECCCCCEEEC
T ss_conf 0479999988889999-8188856615
No 5
>d1ni5a4 d.229.1.1 (A:227-314) tRNA-Ile-lysidine synthetase, TilS, substrate-binding domain {Escherichia coli [TaxId: 562]}
Probab=7.24 E-value=72 Score=12.18 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=12.0
Q ss_pred EEEEEEEEEEEEECCC
Q ss_conf 1014311568662487
Q gi|254781135|r 58 YGWFFKNRQWYIASDS 73 (83)
Q Consensus 58 ~~w~fkNRlwFiq~~T 73 (83)
.+--|++|+||++.=|
T Consensus 73 ~irry~~~Ly~~~~~t 88 (88)
T d1ni5a4 73 EIRRYQSQLWWIKSVT 88 (88)
T ss_dssp EEEESSSEEEEEECCC
T ss_pred EEEEECCEEEEEECCC
T ss_conf 9999899999973479
No 6
>d1onca_ d.5.1.1 (A:) Amphibian cytotoxic ribonuclease {Frog (Rana pipiens), P-30 [TaxId: 8404]}
Probab=6.57 E-value=60 Score=12.62 Aligned_cols=19 Identities=11% Similarity=0.239 Sum_probs=10.7
Q ss_pred CCEEEEEECCCCCCEEECCC
Q ss_conf 96099995187852256486
Q gi|254781135|r 15 DKTFLIALNGQDERQIYNGN 34 (83)
Q Consensus 15 Gg~fL~~~NG~D~~~~ynGT 34 (83)
-..+.++|+| ..|-.|||+
T Consensus 83 ~k~I~VaCe~-~~PVHf~g~ 101 (104)
T d1onca_ 83 TNKFCVTCEN-QAPVHFVGV 101 (104)
T ss_dssp EECEEEEEET-TEEEEEEEE
T ss_pred CEEEEEECCC-CCCEEEEEE
T ss_conf 2039998339-957766200
No 7
>d1qk1a2 d.128.1.2 (A:103-379) Creatine kinase, C-terminal domain {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=5.97 E-value=84 Score=11.79 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=17.1
Q ss_pred EEECCCCEEEEEECCCCCCEE
Q ss_conf 972799609999518785225
Q gi|254781135|r 10 QYTTPDKTFLIALNGQDERQI 30 (83)
Q Consensus 10 q~tT~Gg~fL~~~NG~D~~~~ 30 (83)
-+-++.++|++++|..|--|+
T Consensus 110 v~~n~d~~~~i~VNEEDHLRI 130 (277)
T d1qk1a2 110 IWHNNEKSFLIWVNEEDHTRV 130 (277)
T ss_dssp EEEETTSCEEEEESSSSSEEE
T ss_pred EEECCCCCEEEEECCCCEEEE
T ss_conf 477688828999756544899
No 8
>d1qh4a2 d.128.1.2 (A:103-381) Creatine kinase, C-terminal domain {Chicken (Gallus gallus), brain-type [TaxId: 9031]}
Probab=5.94 E-value=84 Score=11.78 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=17.2
Q ss_pred EECCCCEEEEEECCCCCCEEE
Q ss_conf 727996099995187852256
Q gi|254781135|r 11 YTTPDKTFLIALNGQDERQIY 31 (83)
Q Consensus 11 ~tT~Gg~fL~~~NG~D~~~~y 31 (83)
|-++.++|++++|..|--|+=
T Consensus 116 ~~n~d~~~~i~VNeEDHLRI~ 136 (279)
T d1qh4a2 116 WHNDNKTFLVWINEEDHLRVI 136 (279)
T ss_dssp EEETTSSEEEEESSSSSEEEE
T ss_pred EECCCCEEEEEECCCCEEEEE
T ss_conf 986997189998564258999
No 9
>d1m15a2 d.128.1.2 (A:96-357) Arginine kinase, C-terminal domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]}
Probab=5.78 E-value=86 Score=11.73 Aligned_cols=21 Identities=33% Similarity=0.551 Sum_probs=16.8
Q ss_pred EECCCCEEEEEECCCCCCEEE
Q ss_conf 727996099995187852256
Q gi|254781135|r 11 YTTPDKTFLIALNGQDERQIY 31 (83)
Q Consensus 11 ~tT~Gg~fL~~~NG~D~~~~y 31 (83)
+-+..++|++++|..|--|+-
T Consensus 116 ~~~~~~~~~i~iNeEDHlRI~ 136 (262)
T d1m15a2 116 FHNDAKTFLVWVNEEDHLRII 136 (262)
T ss_dssp EEETTSSEEEEESSSSSEEEE
T ss_pred EECCCCEEEEEECCCCEEEEE
T ss_conf 873887089998775669999
No 10
>d2ad6b1 a.137.2.1 (B:1-69) Methanol dehydrogenase, light chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=5.45 E-value=83 Score=11.82 Aligned_cols=9 Identities=56% Similarity=1.346 Sum_probs=0.0
Q ss_pred ECCCCCCCC
Q ss_conf 648642464
Q gi|254781135|r 31 YNGNNCKSS 39 (83)
Q Consensus 31 ynGTtWt~~ 39 (83)
||||.+.++
T Consensus 1 YDGt~Ckap 9 (69)
T d2ad6b1 1 YDGQNCKEP 9 (69)
T ss_dssp CCSCCCSBT
T ss_pred CCCCCCCCC
T ss_conf 997646888
Done!