RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781136|ref|YP_003065549.1| hypothetical protein CLIBASIA_05190 [Candidatus Liberibacter asiaticus str. psy62] (114 letters) >gnl|CDD|30515 COG0166, Pgi, Glucose-6-phosphate isomerase [Carbohydrate transport and metabolism]. Length = 446 Score = 26.4 bits (58), Expect = 1.7 Identities = 10/38 (26%), Positives = 14/38 (36%) Query: 4 FLRNQYFDSNNLSGEYISSKDQNFLYFPTEKQQLQENA 41 + Y++ E I D YFP QQL + Sbjct: 249 LIGIWYYNFKGAEIEVILPYDPYLEYFPAWLQQLNMES 286 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.320 0.130 0.386 Gapped Lambda K H 0.267 0.0756 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 1,262,428 Number of extensions: 53057 Number of successful extensions: 89 Number of sequences better than 10.0: 1 Number of HSP's gapped: 89 Number of HSP's successfully gapped: 4 Length of query: 114 Length of database: 6,263,737 Length adjustment: 80 Effective length of query: 34 Effective length of database: 4,535,017 Effective search space: 154190578 Effective search space used: 154190578 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 51 (23.4 bits)