BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781137|ref|YP_003065550.1| hypothetical protein
CLIBASIA_05195 [Candidatus Liberibacter asiaticus str. psy62]
(195 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781137|ref|YP_003065550.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040814|gb|ACT57610.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 195
Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats.
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID
Sbjct: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
Query: 61 HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120
HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN
Sbjct: 61 HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120
Query: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180
SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE
Sbjct: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180
Query: 181 FDLALIAEKILWLGG 195
FDLALIAEKILWLGG
Sbjct: 181 FDLALIAEKILWLGG 195
>gi|150397023|ref|YP_001327490.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
gi|150028538|gb|ABR60655.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
Length = 200
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
M +L +N VCD+V LS F+ VY + + + + +V+ Q+AG+EI + DW + L++ ++
Sbjct: 1 MTLLTAINQVCDVVSLSPFDNVYGSAEPNAMTMVALAQEAGDEIARRADWQKTLRQHRVA 60
Query: 61 HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLSI 119
+LP D+ R GG++ + + RPV N W ++ + S P+++I + S
Sbjct: 61 VASENLPDDFQRLTPGGSVRTAEKAFVRPVTNGGQWAVIAGMPSMQPYFFIRAGQVQFSP 120
Query: 120 ---NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
A Y SKNW++ + TADDD+TL P LL+K I+WRW+R +GL+++D
Sbjct: 121 ASAAQGAVIDYVSKNWVLHDPDGPQATFTADDDTTLFPERLLLKGIVWRWKRQKGLAYED 180
Query: 177 CLREFDLALIAE 188
L EF+ L E
Sbjct: 181 NLAEFEADLAQE 192
>gi|227822438|ref|YP_002826410.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
gi|227341439|gb|ACP25657.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
Length = 200
Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
M +L ++N V D+V L RF++VY D + +V+ ++AG EI + DW ++L+ +
Sbjct: 1 MTLLTLINDVADIVSLDRFDSVYGTTDPNAQTMVALAEEAGAEIARRADWKRMLKTHAVS 60
Query: 61 HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLSI 119
P LP DY R + GGA+ D RP+ N W ++ + S P+ + GR + +S
Sbjct: 61 ASPEILPADYQRLVPGGAVRAADGRFFRPITNGAQWAVIVGVASAEPYCHLSGREMLVSP 120
Query: 120 N---SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
+ AT Y S+NW++ E + ADDD+TL P LL K +IWRW+R +GL+F+D
Sbjct: 121 AASSAGATIDYLSRNWVLGDPYEERDTFRADDDTTLFPERLLKKGLIWRWKRQKGLAFED 180
Query: 177 CLREFDLALIAE 188
L EF+ L+ E
Sbjct: 181 NLAEFEADLLQE 192
>gi|218509117|ref|ZP_03506995.1| hypothetical protein RetlB5_17140 [Rhizobium etli Brasil 5]
Length = 232
Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----- 55
M++L I+ VC + L V + D L+ +AG ++ DW L
Sbjct: 1 MSLLTIIQNVCAEIDLDPPAAVMSSADPQVRQLLILTTRAGRDLLKDHDWSVLTTVRDFT 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
+ P P D+ R + V SL PV W + ++ P W
Sbjct: 61 ATGVIPEPAEPPSDFKRFVENSMIWNVSRLWSLNGPV-EPQAWDRLTILNSNPVPQVWRM 119
Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
+ G++ + T + Y S NWI I+ D D+ P LL +IWRW
Sbjct: 120 LGGKLAFFPNDVGETLRYEYVSSNWIAINGGTTYAADWANDTDTARFPEDLLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDLA 184
+RA+GL + + L ++ A
Sbjct: 180 KRAKGLDYGEELENYERA 197
>gi|116253671|ref|YP_769509.1| hypothetical protein RL3931 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258319|emb|CAK09421.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 232
Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 15/198 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
M++L I+ VC + L V + D L +AG ++ DW L
Sbjct: 1 MSILTIIQNVCAEIDLDPPTAVVSSADPQIRQLQILSYRAGRDLLKDHDWSVLMTTRNFT 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
P P D+ R + L PV W ++ P +
Sbjct: 61 ATGAIPEPTEPPADFQRYVANSVIWNTSRLWQLNGPV-EPQTWERNTILNSNPVPQIYRM 119
Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
+ G++ + T + Y SK WI + + D D P LL +IWRW
Sbjct: 120 LGGKLAFFPNDVGETLRYEYVSKYWIAVMGGPTYAENWANDTDMARFPEDLLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDLA 184
+RA+GL + + L F+ A
Sbjct: 180 KRAKGLDYGEELENFERA 197
>gi|218678663|ref|ZP_03526560.1| hypothetical protein RetlC8_07169 [Rhizobium etli CIAT 894]
Length = 235
Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 15/198 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
M++L I+ VC + L V + D + L +AG ++ + DW L
Sbjct: 1 MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMREHDWSALLVDRQFT 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
++ P P D+ R L PV W ++ P W
Sbjct: 61 ATGVNPEPAEPPADWDRFAANAKIWNAARLWQLNGPV-EPQTWQRQTILNANPVPQIWRM 119
Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
G++ + T + Y S W+ ++ + D D+ P LL +IWRW
Sbjct: 120 AGGKLDIYPNAAGETIRYEYISGFWVAVNGGSSFAGNWANDTDTARFPEDLLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDLA 184
+RA+GL + + + F+ +
Sbjct: 180 KRAKGLDYGEEIASFERS 197
>gi|209548340|ref|YP_002280257.1| hypothetical protein Rleg2_0735 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534096|gb|ACI54031.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 235
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 73/198 (36%), Gaps = 15/198 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
M++L I+ VC + L V + D + L +AG ++ + DW L
Sbjct: 1 MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLVREHDWSALMVRRQFV 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
+ P P D+ R L PV W ++ P W
Sbjct: 61 ATGANPEPAEPPDDWNRFAANAKIWNASRLWQLNGPV-EPQTWQRQTILNSNPVPQIWRM 119
Query: 110 IDGRMIHLSINSPATFR--YFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
G++ S T Y S W+ ++ + D D+ P LL +IWRW
Sbjct: 120 AGGKLDIYPNVSGETMEYAYISGFWVAVNGGATTAANWANDTDTARFPEDLLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDLA 184
+RA+GL + + + F+ +
Sbjct: 180 KRAKGLDYGEEIASFERS 197
>gi|117925016|ref|YP_865633.1| hypothetical protein Mmc1_1719 [Magnetococcus sp. MC-1]
gi|117608772|gb|ABK44227.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
Length = 233
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 14/203 (6%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
M++L+++ DL+G+ R V + D + L++ Q G + + WP++ +E
Sbjct: 1 MSLLSMVQQAADLIGVQRPTQVVSSSDPTIRQLLAVAQMEGRTLAARGPWPEMTREASFT 60
Query: 61 HWPFHLPQDYYRPLL-------GGAMVMLDLSLARPVINAVDWGIVKRISHT---PWYWI 110
D + + ++A+DW + P + I
Sbjct: 61 TVAGQANYDLQSLVPDMDFLINNTMWNRTTGRVVGGPMSAMDWQANRAHGSATPFPTFRI 120
Query: 111 DGRMIHLSINSPAT----FRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
++ + + F Y SKNW S + + AD D +L +L+ ++WR+
Sbjct: 121 REGVLMFAPTPAQSESYSFEYHSKNWCKSSAGDGQQGWQADSDVGILSEHLMTLGLVWRF 180
Query: 167 RRAQGLSFDDCLREFDLALIAEK 189
++A+G + + + +K
Sbjct: 181 KKAKGFDYSQEYGAYQNEVSQKK 203
>gi|86356743|ref|YP_468635.1| hypothetical protein RHE_CH01100 [Rhizobium etli CFN 42]
gi|86280845|gb|ABC89908.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 235
Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 15/197 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
M++L I+ VC + L V + D + L +AG ++ DW L +
Sbjct: 1 MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFE 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
+ P P + R + V +L PV W ++ P W
Sbjct: 61 ATGANPEPDEPPGAWDRFVANARIWNVSRLWALNGPV-EPQSWQRQTILNANPVPQIWRM 119
Query: 110 IDGRMIHLSINSPATFR--YFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
GR+ + T Y S W+ ++ + D D+ P LL +IWRW
Sbjct: 120 AGGRLDIYPNVAGETMEYAYISGFWVALNGGPNTAGNWANDTDTAHFPEELLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDL 183
+RA+GL + + L F+
Sbjct: 180 KRAKGLDYGEELASFER 196
>gi|327191476|gb|EGE58496.1| hypothetical protein RHECNPAF_300006 [Rhizobium etli CNPAF512]
Length = 234
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 15/197 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
M++L I+ VC + L V + D + L +AG ++ DW L Q
Sbjct: 1 MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFQ 60
Query: 56 EIKIDHWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
+ P P D+ R V SL PV W ++ P W
Sbjct: 61 ATGANPEPDEPPGDWDRFAANARIWNVSRLWSLNGPV-EPQSWQRQTILAANPVPQIWRM 119
Query: 110 IDGRMIHLSINSPATFR--YFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
GR+ + T Y S W+ ++ A + D D+ P LL +IWRW
Sbjct: 120 AGGRLDIYPSVAGETMEYAYISGFWVAVNGGATAAGNWANDTDTARFPEELLELSLIWRW 179
Query: 167 RRAQGLSFDDCLREFDL 183
+RA+GL + + L F+
Sbjct: 180 KRAKGLDYGEELVSFER 196
>gi|152983270|ref|YP_001353889.1| hypothetical protein mma_2199 [Janthinobacterium sp. Marseille]
gi|151283347|gb|ABR91757.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 233
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 14/200 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQE--IK 58
M+ LAI+ TVC +G+ + D + L++ ++ G++ + +W L E
Sbjct: 1 MSCLAIIKTVCRRIGILAPNAAVGSTDPQIIQLLAISEEEGQDQADRYNWQSLQTEAIFT 60
Query: 59 IDHWPFHLPQDYYRPLLGGAMVMLDLS--LARPVINA---VDWGIVKRISHTP----WYW 109
P P + + L RPV DW V +
Sbjct: 61 TVATQVQGPLSTIAPNCDYIVNNTIWNRTLRRPVYGPKSEQDWQQVVAFQINGPFNAYRI 120
Query: 110 IDGRMIHLS---INSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
I+ ++ F Y S+NW+ S T D D+ + L+I +WRW
Sbjct: 121 INDQINFYPDPVAGQTCAFEYISRNWVNTSVAATSSVWTNDADTPKISDQLMILGTVWRW 180
Query: 167 RRAQGLSFDDCLREFDLALI 186
++A+GL + + +++ +
Sbjct: 181 KQAKGLDYAEDFAKYERRMA 200
>gi|110632594|ref|YP_672802.1| hypothetical protein Meso_0233 [Mesorhizobium sp. BNC1]
gi|110283578|gb|ABG61637.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 234
Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 16/203 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ--EIK 58
M +L+ + R V + DE V + + ++A EI DW +L + EI
Sbjct: 1 MTILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEIT 60
Query: 59 ID--HWPFHLPQDYYRPLLGGAM---VMLDLSLARPVINAVDW---GIVKRISHTPWYW- 109
D + P DY R + + V N +W I K TP W
Sbjct: 61 ADGEASAYPFPSDYDRMVQASEIFDPNNWCW-GYHHVPNYSEWILYEIRKIAMLTPGIWT 119
Query: 110 IDGRMIHLSINSPA----TFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
I H A F Y SKN + N+ K IT+D DS +L LL +IW+
Sbjct: 120 IRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSDSDSFVLDERLLTLSLIWK 179
Query: 166 WRRAQGLSFDDCLREFDLALIAE 188
++ +GL + + ++++AL E
Sbjct: 180 YKAMKGLDYQQEVDDYNIALSQE 202
>gi|13470678|ref|NP_102247.1| hypothetical protein mll0453 [Mesorhizobium loti MAFF303099]
gi|14021420|dbj|BAB48033.1| mll0453 [Mesorhizobium loti MAFF303099]
Length = 233
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKV-DWPQ--LLQEI 57
M +L+++ VC ++GL+ V+ D V L + + + I DW + L +
Sbjct: 1 MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTL 60
Query: 58 KIDHWP--FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHT-------PWY 108
D F+ P DY R L A V S P + D I+ W
Sbjct: 61 TGDGSTVGFNFPSDYKRML-KKARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWT 119
Query: 109 WIDGRMIH---LSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
I +++ ++ S A F Y + I D + K TADDD L +L +IW+
Sbjct: 120 MIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTADDDVFRLDERVLKLGMIWQ 179
Query: 166 WRRAQGLSFDDCLREFDLALI 186
W+ +G ++ + + ++ AL
Sbjct: 180 WKANKGQAYAEDMTNYEDALA 200
>gi|316933869|ref|YP_004108851.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
gi|315601583|gb|ADU44118.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
Length = 233
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 69/198 (34%), Gaps = 13/198 (6%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL--LQEIK 58
M VLA + + +++ D+ L +I DW L L E+
Sbjct: 1 MTVLAAAQAAGLRLLGVKPISLFSAPDQVAQELADLAGDVAADIVGAHDWQALKELAELA 60
Query: 59 IDHW--PFHLPQDYYRPLLGGAMVMLDLSL--ARPVINAVDWGIVK--RISHTP--WYWI 110
D LP D+ R + + L + DW + + TP W +
Sbjct: 61 GDGATIALDLPADFGRMVKDPKIHSKRYPLTDFCAAADEDDWLRLADLGFAATPGTWIML 120
Query: 111 DGRMIHLSI---NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
G++ A F Y + + E K T D D L LL +IWRWR
Sbjct: 121 GGKLNVYPAMPVGEAARFYYIRSRPVRSAAGERKASFTEDTDEFFLAQRLLELGLIWRWR 180
Query: 168 RAQGLSFDDCLREFDLAL 185
+ + + + L ++ AL
Sbjct: 181 AQKRMEYAEDLANYEKAL 198
>gi|315122529|ref|YP_004063018.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495931|gb|ADR52530.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 150
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 103/149 (69%), Positives = 124/149 (83%)
Query: 47 KVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTP 106
++DWP+LL+ + I+ PFHLPQD++RPL GA++M D SLARPVI++VDW IVK+ S P
Sbjct: 2 RIDWPELLRTVTINSLPFHLPQDFHRPLPSGAVIMPDHSLARPVIHSVDWEIVKKTSQDP 61
Query: 107 WYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
WYWID R++HLS + PATFRYFSKNW+I S + K ITADDDST+ P YLLIKDIIWRW
Sbjct: 62 WYWIDNRILHLSPSPPATFRYFSKNWVIGSQQNPKQIITADDDSTIFPRYLLIKDIIWRW 121
Query: 167 RRAQGLSFDDCLREFDLALIAEKILWLGG 195
RRAQGLSFDD LREFD A+IAEKIL+LGG
Sbjct: 122 RRAQGLSFDDYLREFDSAVIAEKILFLGG 150
>gi|15320621|ref|NP_203465.1| hypothetical protein Mx8p51 [Myxococcus phage Mx8]
gi|15281731|gb|AAK94386.1|AF396866_51 p51 [Myxococcus phage Mx8]
Length = 242
Score = 158 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 2 NVLAILNTVCDLVGLSRFETV--YQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKI 59
+I+N +GL + Y + D + V L L+ G+++ W L Q+
Sbjct: 5 TAASIINDAAVELGLLATDVADPYASADVNLVQLCRLLKSLGQDMVRDYQWTHLQQQWTF 64
Query: 60 DH----WPFHLPQDYYRPL-LGGAMVMLDLSLARPVINAVDWGIVKRISHTP-----WYW 109
+ +P DY R + G + L P+ +A W +++ ++ +
Sbjct: 65 ATQVGLANYEMPPDYNRFVDQTGWNRTQRMPLLGPL-SAQGWQLLQVLTSAGTVDVMYRL 123
Query: 110 IDGRMIHLSINSPAT---FRYFSKNWI-IDSNKEAKHHI-TADDDSTLLPTYLLIKDIIW 164
+ G + + Y S +W+ ++ + D+ LL+ +
Sbjct: 124 VGGEFVLHPTPESVADIAYEYVSSHWVGTGGSETPNADAPESGGDTLFFDRRLLVCGLKL 183
Query: 165 RWRRAQGLSFDDCLREFDLAL 185
RW+RA+G C ++D AL
Sbjct: 184 RWQRAKGFDSTACQDDYDKAL 204
>gi|254720057|ref|ZP_05181868.1| hypothetical protein Bru83_11051 [Brucella sp. 83/13]
gi|265985064|ref|ZP_06097799.1| predicted protein [Brucella sp. 83/13]
gi|306839391|ref|ZP_07472205.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
gi|264663656|gb|EEZ33917.1| predicted protein [Brucella sp. 83/13]
gi|306405514|gb|EFM61779.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
Length = 239
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 21/201 (10%)
Query: 6 ILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----EIKIDH 61
++N L D S + + +L EE+ ++DWP + I
Sbjct: 7 LMNRAARECKLKAPGAWVPATDLSYMDMKDYLSDTVEELLQRLDWPNPVTIDLPVIGTGA 66
Query: 62 WPFHLPQDYYRPLLGGAMVMLDLSLAR----PVINAVDWGIVKRISH---TPWYWIDGRM 114
++LP D+ R + + + + + R P+ + W +K++ +Y I G
Sbjct: 67 EDYNLPPDFLR-VTRDELAVYEPTTTRRACIPITSNGAWSHLKQLGSAGGNRYYRIQGSD 125
Query: 115 IHLSIN--------SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
I Y SKNW + + K ++ L P L+ ++WR+
Sbjct: 126 GAYKIGFYRPLETNQRVIVSYVSKNWNVAA-GAYKSEWVVEEAECLFPADLVRLGVVWRF 184
Query: 167 RRAQGLSFDDCLREFDLALIA 187
RRA+G+ + D L E++ L
Sbjct: 185 RRAKGMPYADRLNEYEGRLSR 205
>gi|319783506|ref|YP_004142982.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169394|gb|ADV12932.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 234
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 70/196 (35%), Gaps = 14/196 (7%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
M++L ++ ++G+ VY + V + EI DW +LL
Sbjct: 1 MSILDVVKGAATVLGMDVPTLVYGATNREMVEMQELANVMASEIVDAYDWQKLLVLKTFT 60
Query: 61 ----HWPFHLPQDYYRPLLGG--AMVMLDLSLARPVINAVDW---GIVKRISHTPWYWID 111
F+LP DY R + + + W + + ++ I
Sbjct: 61 GDGIAADFNLPDDYERMQQTSSLWSSRWLWATN-HLTSPDQWIELQVTPIATVNGYWIIF 119
Query: 112 GRMIHLSI----NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
G H + F Y S + SN K T D D+ L LL II+RW+
Sbjct: 120 GDQFHQWPVMANSETVKFFYVSNQIVQASNSSLKPAFTEDADTFRLSERLLKLAIIYRWK 179
Query: 168 RAQGLSFDDCLREFDL 183
+ +GL++ +F+
Sbjct: 180 QNKGLAYQQAQDDFET 195
>gi|126442517|ref|YP_001063339.1| hypothetical protein BURPS668_A2345 [Burkholderia pseudomallei 668]
gi|126222008|gb|ABN85513.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 294
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 10/140 (7%)
Query: 57 IKIDHWPFHLPQDYYRPLL-GGAMVMLDLSLARPVINAVDWGIVK-RISHTPWY---WID 111
+ +P D + G L P+ + +W ++K IS T I
Sbjct: 121 FSFGQESYPIPSDADHFIQHTGWDRSFRWQLVGPL-SPQEWQVLKSGISPTGPRLRFRIM 179
Query: 112 GRMIHLSINSPA----TFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
G I+++ + Y+S W + ++ AD D+ +L L I +I RW
Sbjct: 180 GGQIYVNPVPASLDNLVLEYYSTGWCQSATGASQTAWAADTDTPVLQDRLFILGMIARWL 239
Query: 168 RAQGLSFDDCLREFDLALIA 187
+G +++ A+ A
Sbjct: 240 NRKGFDSSVAQDDYEKAVDA 259
>gi|167907342|ref|ZP_02494547.1| hypothetical protein BpseN_34250 [Burkholderia pseudomallei NCTC
13177]
Length = 143
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 87 ARPVINAVDWGIVK-RISHTPWY---WIDGRMIHLSINSPA----TFRYFSKNWIIDSNK 138
P+ + +W ++K IS T I G I+++ + Y+S W +
Sbjct: 1 MGPL-SPQEWQVLKSGISPTGPRLRFRIMGGQIYVNPVPASLDNLVLEYYSTGWCQSATG 59
Query: 139 EAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLREFDLALIA 187
++ AD D+ +L L I +I RW +G +++ A+ A
Sbjct: 60 ASQTAWAADTDTPVLQDRLFILGMIARWLNRKGFDSSVAQDDYEKAVDA 108
>gi|315122530|ref|YP_004063019.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495932|gb|ADR52531.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 37
Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFL 37
M+VL +LNT+CDLVGLSRFE +Y+NQDE+ VLL+S L
Sbjct: 1 MSVLTLLNTICDLVGLSRFEKIYENQDENAVLLISLL 37
>gi|150007584|ref|YP_001302327.1| putative TonB-dependent receptor [Parabacteroides distasonis ATCC
8503]
gi|149936008|gb|ABR42705.1| putative TonB-dependent receptor [Parabacteroides distasonis ATCC
8503]
Length = 739
Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 16/131 (12%)
Query: 39 QAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGI 98
+ G ++ + E+K LP D + + + + A W +
Sbjct: 371 EGGLKLIRRSSTSHATSEVKELGEGVWLPADLQPLVEYRHVQNICSAYAGYGFKYGKWSL 430
Query: 99 VKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTY-L 157
I + + + F Y +W+ T+ + L L
Sbjct: 431 NPGIRMEHTW----QDVTYKQGEGKDFNYRVTDWVPS--------WTS---AFRLDDRSL 475
Query: 158 LIKDIIWRWRR 168
R RR
Sbjct: 476 FRLAYNLRLRR 486
>gi|255013890|ref|ZP_05286016.1| putative TonB-dependent receptor [Bacteroides sp. 2_1_7]
Length = 734
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 16/131 (12%)
Query: 39 QAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGI 98
+ G ++ + E+K LP D + + + + A W +
Sbjct: 366 EGGLKLIRRNSTSHATSEVKELGEGVWLPADLQPLVEYRHVQNICSAYAGYGFKYGKWSL 425
Query: 99 VKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTY-L 157
I + + + F Y +W+ T+ + L L
Sbjct: 426 NPGIRMEHTW----QDVTYKQGEGKDFNYRVTDWVPS--------WTS---AFRLDDRSL 470
Query: 158 LIKDIIWRWRR 168
R RR
Sbjct: 471 FRLAYNLRLRR 481
>gi|302413513|ref|XP_003004589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261357165|gb|EEY19593.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 438
Score = 39.4 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 37/155 (23%), Gaps = 26/155 (16%)
Query: 1 MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
M+ ++++ L+ ++Y E L + + W
Sbjct: 270 MDPISVVRAALPLLAGGAPISIYSPTIEPLTQLADCFSK-----ARRAGW---------- 314
Query: 61 HWPFHLPQDYYRPLLGGAMVML--DLSLARP---VINAVDWGIVKRISHTPWY-----WI 110
D R D P + V KR P
Sbjct: 315 -SSNPPTDDSGRARCRTWRNWPGSDDFPVNPSLLIGPNVQTSRAKRWQVLPGRTHPLMMA 373
Query: 111 DGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHIT 145
G L S A R SK+ S ++H
Sbjct: 374 RGFPGFLFTGSKARGRQRSKHAARPSGARSRHSWE 408
>gi|145345498|ref|XP_001417245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577472|gb|ABO95538.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 20/58 (34%)
Query: 38 QQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVD 95
+A + C W +P+D+ R +L +V + A P A D
Sbjct: 15 TRAALDACRDARWRATFAAHGFRAVALEVPEDFIRYVLADGVVARETDAAMPRRVAQD 72
>gi|256839769|ref|ZP_05545278.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298375528|ref|ZP_06985485.1| TonB-dependent receptor exported protein [Bacteroides sp. 3_1_19]
gi|256738699|gb|EEU52024.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298268028|gb|EFI09684.1| TonB-dependent receptor exported protein [Bacteroides sp. 3_1_19]
Length = 739
Score = 39.0 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 16/131 (12%)
Query: 39 QAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGI 98
+ G ++ + E+K LP D + + + + A W +
Sbjct: 371 EGGLKLIRRSSTSHATSEVKELDEGVWLPADLQPLVEYRHVQNICSAYAGYGFKYGKWSL 430
Query: 99 VKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTY-L 157
I + + + F Y +W+ T+ + L L
Sbjct: 431 NPGIRMEHTW----QDVTYKQGEGKDFNYRVTDWVPS--------WTS---AFRLDDRSL 475
Query: 158 LIKDIIWRWRR 168
R RR
Sbjct: 476 FRLAYNLRLRR 486
>gi|262381919|ref|ZP_06075057.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|301310452|ref|ZP_07216391.1| putative TonB-dependent receptor exported protein [Bacteroides sp.
20_3]
gi|262297096|gb|EEY85026.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|300832026|gb|EFK62657.1| putative TonB-dependent receptor exported protein [Bacteroides sp.
20_3]
Length = 737
Score = 38.2 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 16/131 (12%)
Query: 39 QAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGI 98
+ G ++ + E+K LP D + + + + A W +
Sbjct: 371 EGGLKLIRRNSTSHATSEVKELGEGVWLPADLQPLVEYRHVQNIGSAYAGYGFKYGKWSL 430
Query: 99 VKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTY-L 157
I + + + F Y +W+ T+ + L L
Sbjct: 431 NPGIRMEHTW----QDVTYKQGEGKDFNYRVTDWVPS--------WTS---AFRLDDRNL 475
Query: 158 LIKDIIWRWRR 168
R RR
Sbjct: 476 FRLAYNLRLRR 486
>gi|108756955|ref|YP_631380.1| ATP-dependent helicase HrpA [Myxococcus xanthus DK 1622]
gi|108460835|gb|ABF86020.1| ATP-dependent helicase HrpA [Myxococcus xanthus DK 1622]
Length = 1242
Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 14/93 (15%)
Query: 5 AILNTVCDLVGLS------RFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIK 58
A+ V L G+ R + V L + L + G+E+ D LL++
Sbjct: 884 ALARAVSRLCGMDVTEESLRADAVV----PYLRLTLRVLDERGKELARSRDADALLKQHG 939
Query: 59 IDH----WPFHLPQDYYRPLLGGAMVMLDLSLA 87
P D+ R L +
Sbjct: 940 GHARAALRSAAPPSDWERKGLTAWTFGELPPVV 972
>gi|291542993|emb|CBL16103.1| CHAP domain./Ricin-type beta-trefoil lectin domain [Ruminococcus
bromii L2-63]
Length = 719
Score = 37.8 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 25/133 (18%)
Query: 29 STVLLVSFLQQAGEE--ICLKVDW-----------PQLLQEIKIDHWPFHLPQD-----Y 70
S + + Q G + + W + D++ P + Y
Sbjct: 25 SCIQASAMTNQEGADWALARIGQWIDTDGYYGAQCKDFVNAFTQDNFGVTFPGNACDLIY 84
Query: 71 YRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSK 130
G + + + V D I + P+ G + + TF +
Sbjct: 85 DSL-PAGWQRIQNYAEF--VPEPGDIAIWGGWNGNPY----GHTAIIVSANLYTFDSVDQ 137
Query: 131 NWIIDSNKEAKHH 143
NW+ S+ +K
Sbjct: 138 NWVNSSSNGSKAA 150
>gi|134094232|ref|YP_001099307.1| putative RNA-directed DNA polymerase [Herminiimonas arsenicoxydans]
gi|133738135|emb|CAL61180.1| RNA-directed DNA polymerase [Herminiimonas arsenicoxydans]
Length = 567
Score = 37.8 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 29/141 (20%)
Query: 53 LLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDG 112
+L+ H P + + R ++ + R DW + W I
Sbjct: 378 MLRGWSQYHSPVVAKETFSRIDHLLFWRLMRWAKRRHPKKNADWIRQRY-----WRSIGE 432
Query: 113 RMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGL 172
+NW+ ++ +T D D ++ Y L I R ++ +G
Sbjct: 433 -----------------RNWVFAAD-----TLTKDGDKGVMQMYSLPGTPIVRHKKIKGA 470
Query: 173 --SFDDCLREFDLALIAEKIL 191
+D + L E++L
Sbjct: 471 YNPYDPEDEMYGETLRQERML 491
>gi|268324850|emb|CBH38438.1| hypothetical protein, calcineurin-like phosphoesterase family
[uncultured archaeon]
Length = 642
Score = 37.8 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 4/116 (3%)
Query: 46 LKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHT 105
W + Q K+ F +Y R + + A W I+ +
Sbjct: 531 RDELWEAISQNGKVVAVFFGDEHNYNRMCVDSETPVHLDGSANANFTNSVWQIISGGAGA 590
Query: 106 PWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKD 161
P+Y + F Y SK++ + S K + DS + ++
Sbjct: 591 PFY---AQEDTPWSGDVEVF-YPSKHYCMVSVDGDKVSLKVISDSGEIVDECVLCG 642
>gi|317508934|ref|ZP_07966570.1| universal stress protein family [Segniliparus rugosus ATCC BAA-974]
gi|316252775|gb|EFV12209.1| universal stress protein family [Segniliparus rugosus ATCC BAA-974]
Length = 191
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 5/113 (4%)
Query: 4 LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQA----GEEICLKVDWPQLLQEIKI 59
+A++ +S V + S+ L V G E+ W + +
Sbjct: 32 VAVIRGSGQPSTVSAPVLVGVDASPSSDLAVELAFDEAAWRGAELIAAHAWTE-HVAVSA 90
Query: 60 DHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDG 112
+ + LP D+ R V+ + P W+
Sbjct: 91 SIYAYPLPMDWDRMGEAEEKVLAEKIGFWHEKYPEVRVRKVVSCARPTRWLLE 143
>gi|170093227|ref|XP_001877835.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647694|gb|EDR11938.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1176
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 29/110 (26%), Gaps = 12/110 (10%)
Query: 8 NTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLP 67
TV ++ T + +E + + + + G+E
Sbjct: 159 TTVPSSTAIAAPSTTASSANEKVLQYLEGMSREGDE------------PDTTAPRSIADT 206
Query: 68 QDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHL 117
DY R L + P + + + +P +G H
Sbjct: 207 DDYQRMLENQNSPHSPQRIYSPAPRSQANHTLPELPSSPTRHTNGNNAHH 256
>gi|260579494|ref|ZP_05847368.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258602380|gb|EEW15683.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 605
Score = 36.3 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 34 VSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQD--YYRPLLGGAMVMLDLSLARPVI 91
V+F ++ + L+ + P +P Y L + + L P
Sbjct: 160 VAFFWDKVSDVAEDLRLNSPLETVIAVTLPDEMPASLRYALKLPIPKIKAMKDKLTGPAP 219
Query: 92 NAVDWGIVKRISHTPWYWIDGRMI--HLSINSPATFRYFSK 130
AV W R W+ G + + PA Y S
Sbjct: 220 AAVSWKSFMRTGGNGEKWLRGGVNNKKIDPTDPALILYTSG 260
>gi|238752899|ref|ZP_04614363.1| Holo-ACP synthase [Yersinia rohdei ATCC 43380]
gi|238708884|gb|EEQ01138.1| Holo-ACP synthase [Yersinia rohdei ATCC 43380]
Length = 182
Score = 36.3 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 4 LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
LA + L V N T L + QA E+CL+ WP L QE
Sbjct: 34 LARHQVTLISLTLVTPGAVKDN--PLTRKLFALAWQAIAELCLQHHWPVLQQEAFPLPTG 91
Query: 64 FHLPQDYYRPLLGGAMVMLDLSLARP 89
RP L L L P
Sbjct: 92 CEGLIALDRPAEQVKDAALLLELKHP 117
>gi|167760340|ref|ZP_02432467.1| hypothetical protein CLOSCI_02714 [Clostridium scindens ATCC 35704]
gi|167662013|gb|EDS06143.1| hypothetical protein CLOSCI_02714 [Clostridium scindens ATCC 35704]
Length = 1852
Score = 35.9 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 33/118 (27%), Gaps = 7/118 (5%)
Query: 71 YRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDG-----RMIHLSINSPATF 125
L + S + PV + + ++ T G R + + +
Sbjct: 666 DDILNDENGRTITWSTSTPVT-PQEPSVANGLAPTQIAMTQGESADSRYLRWYTGAGVSG 724
Query: 126 RYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLREFDL 183
++ + TA+ + P LL ++ + + + + +
Sbjct: 725 TAVAQ-ISESGDFADAATFTAETQEVVKPKTLLNLGLMATYTTQKARKYTAKITGLET 781
>gi|159898381|ref|YP_001544628.1| amino acid adenylation domain-containing protein [Herpetosiphon
aurantiacus ATCC 23779]
gi|159891420|gb|ABX04500.1| amino acid adenylation domain [Herpetosiphon aurantiacus ATCC 23779]
Length = 3099
Score = 35.5 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 36 FLQQAGEEICLKVD-WPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAV 94
+AG ++ + + W L E+ P LP DY RP L + + V+
Sbjct: 1776 LAWKAGRDLTTQANFWQALFAEL---PAPLALPTDYPRPALKSYVGQRVMQ----VLEPA 1828
Query: 95 DWGIVKRISHT 105
+ +K++S
Sbjct: 1829 SYQALKQLSRQ 1839
>gi|284029708|ref|YP_003379639.1| hypothetical protein Kfla_1745 [Kribbella flavida DSM 17836]
gi|283809001|gb|ADB30840.1| hypothetical protein Kfla_1745 [Kribbella flavida DSM 17836]
Length = 439
Score = 35.5 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 56/195 (28%), Gaps = 17/195 (8%)
Query: 2 NVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKI-- 59
+A+ L+G S + + + V V ++V W +
Sbjct: 4 TSIALTGAAALLIGTSAPPAAAEISNPAAVGDVRVAWATPAHEGVRVTWTESASAANTLT 63
Query: 60 --DHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMI 115
P P + G A V+ R AV W IV + +
Sbjct: 64 LYSSDPGAGPTELGTTPAGAANELVVTPARFRRSSDPAVKWWIVVSAADGGSARSVDFDM 123
Query: 116 HLSINSPATFRYFSKNWIIDSNKEAKHHIT--ADDDSTLLPTYLLIKDIIWRWRRAQGLS 173
F Y + + + T AD + P L +R+R Q +
Sbjct: 124 ---------FTYRPSAVDLSFTADGQVRWTVPADTSTDGTPNDPLDLPTAYRYRVQQSVD 174
Query: 174 FDDCLREFDLALIAE 188
D ++ A++ +
Sbjct: 175 TDPDYGNWECAVVRD 189
>gi|254381513|ref|ZP_04996877.1| hypothetical protein SSAG_01178 [Streptomyces sp. Mg1]
gi|194340422|gb|EDX21388.1| hypothetical protein SSAG_01178 [Streptomyces sp. Mg1]
Length = 196
Score = 35.5 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 13/91 (14%)
Query: 7 LNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHL 66
L V + G+ V D + + E+ + DWP +L+
Sbjct: 28 LTGVGAVGGVDHPHQVLGPGDPPVLRERGPRRGLVREVQRRADWPDMLRIAG-------- 79
Query: 67 PQDYYRPLLGGAMVMLDLSLARPVINAVDWG 97
+ + + W
Sbjct: 80 -----SLVTNQVRAYDLPRMFGREGHPTQWS 105
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.306 0.126 0.341
Lambda K H
0.267 0.0392 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,415,044,431
Number of Sequences: 14124377
Number of extensions: 38670129
Number of successful extensions: 188189
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 188096
Number of HSP's gapped (non-prelim): 50
length of query: 195
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 64
effective length of database: 2,992,500,243
effective search space: 191520015552
effective search space used: 191520015552
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.6 bits)
S2: 77 (34.3 bits)