Query gi|254781138|ref|YP_003065551.1| hypothetical protein CLIBASIA_05200 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 178
No_of_seqs 113 out of 799
Neff 7.3
Searched_HMMs 13730
Date Wed Jun 1 11:38:38 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781138.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pv0a_ a.2.12.1 (A:) Sporulat 39.2 7.6 0.00055 16.2 2.1 14 26-39 23-36 (46)
2 d1h6ga2 a.24.9.1 (A:508-631) a 17.3 26 0.0019 13.2 1.6 12 26-37 78-89 (124)
3 d2a0sa1 d.96.1.2 (A:18-180) 6- 7.1 59 0.0043 11.2 2.0 18 1-18 50-67 (163)
4 d2dkya1 a.60.1.3 (A:8-85) Dele 6.1 58 0.0042 11.2 0.1 21 144-165 17-37 (78)
5 d1xkia_ b.60.1.1 (A:) Von Ebne 5.7 71 0.0052 10.7 4.9 76 61-137 34-111 (139)
6 d2h80a1 a.60.1.3 (A:11-81) Del 5.1 51 0.0037 11.6 -0.7 21 144-165 12-32 (71)
7 d2ysca1 b.72.1.1 (A:8-33) Amyl 4.7 82 0.006 10.4 1.4 11 60-70 2-12 (26)
8 d3buxb3 d.93.1.1 (B:264-351) C 4.1 93 0.0068 10.1 1.8 15 4-18 10-24 (88)
9 d2g64a1 d.96.1.2 (A:1-139) 6-p 3.5 1.1E+02 0.0078 9.7 2.0 28 1-28 64-94 (139)
10 d1b66a_ d.96.1.2 (A:) 6-pyruvo 3.2 1.2E+02 0.0088 9.4 2.3 16 1-16 62-77 (138)
No 1
>d1pv0a_ a.2.12.1 (A:) Sporulation inhibitor Sda {Bacillus subtilis [TaxId: 1423]}
Probab=39.23 E-value=7.6 Score=16.20 Aligned_cols=14 Identities=36% Similarity=0.676 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 79999999999610
Q gi|254781138|r 26 KNFLHRIEVKINRA 39 (178)
Q Consensus 26 ~~FI~~aE~rI~R~ 39 (178)
|+||.+-|.+|.|+
T Consensus 23 ~dFI~Lie~Ei~RR 36 (46)
T d1pv0a_ 23 RDFIELIENEIKRR 36 (46)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999997
No 2
>d1h6ga2 a.24.9.1 (A:508-631) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.29 E-value=26 Score=13.15 Aligned_cols=12 Identities=17% Similarity=0.492 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHH
Q ss_conf 799999999996
Q gi|254781138|r 26 KNFLHRIEVKIN 37 (178)
Q Consensus 26 ~~FI~~aE~rI~ 37 (178)
|.|.+.++.-++
T Consensus 78 P~f~~~~~~a~~ 89 (124)
T d1h6ga2 78 PRFTEQVEAAVE 89 (124)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 989999999999
No 3
>d2a0sa1 d.96.1.2 (A:18-180) 6-pyruvoyl tetrahydropterin synthase {Plasmodium vivax [TaxId: 5855]}
Probab=7.13 E-value=59 Score=11.20 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=9.8
Q ss_pred CCCCHHHHHHHHHHHHCC
Q ss_conf 975789999999987426
Q gi|254781138|r 1 MAKDFASLLIDVSHYVEK 18 (178)
Q Consensus 1 Ma~~Y~~L~~~I~~~l~r 18 (178)
|..+|+.||..++.+.+.
T Consensus 50 mv~DF~~lK~~i~~i~d~ 67 (163)
T d2a0sa1 50 YVIDFSILKEKVRKVCKQ 67 (163)
T ss_dssp CSSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
T ss_conf 422689999999999986
No 4
>d2dkya1 a.60.1.3 (A:8-85) Deleted in liver cancer 1 protein, DLC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.13 E-value=58 Score=11.23 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=11.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999741498889999999999
Q gi|254781138|r 144 EEIALWEQKIDKATTASALFQE 165 (178)
Q Consensus 144 ~eA~~flk~~~~~~~~~~~y~~ 165 (178)
.||+.||+ ...-+.|.++|++
T Consensus 17 ~eAC~WLr-aaGFpqYAqlyEd 37 (78)
T d2dkya1 17 KEACDWLR-ATGFPQYAQLYED 37 (78)
T ss_dssp HHHHHHHH-HHTCTTHHHHHHT
T ss_pred HHHHHHHH-HCCCHHHHHHHHC
T ss_conf 99999999-8388489998651
No 5
>d1xkia_ b.60.1.1 (A:) Von Ebner's gland protein (VEGP, tear lipocalin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.67 E-value=71 Score=10.74 Aligned_cols=76 Identities=11% Similarity=0.042 Sum_probs=40.4
Q ss_pred CCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECC--EEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHCHHH
Q ss_conf 87732678776226774101012224776505899888--699950466415898763165433545444301112289
Q gi|254781138|r 61 PDDYIEIRFLEDNKGNKLDHLPLSISLQKNKGYIITAD--SICVLPISSEDVVLYYYACIPPLTENNPVNWLLHRAPDL 137 (178)
Q Consensus 61 P~d~l~~~~~~~~~~~~~~~~~~~~~~g~P~~ya~~~~--~l~~~P~~~~~~~l~Yy~~~~~Ls~~n~tn~l~~~~pd~ 137 (178)
|.+-+.+......++.-.+..-....++.|.+|+...+ .+.+.++.--.+-+.|...... ......-||+.+-|++
T Consensus 34 ~~g~l~v~~~~~~~g~C~~~~~~~~~t~~~g~~~~~~g~~~~~v~~tdy~~y~i~y~~~~~~-~~~~~~~~l~~R~~~~ 111 (139)
T d1xkia_ 34 EGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYSEGELH-GKPVRGVKLVGRDPKN 111 (139)
T ss_dssp TTSCEEEEEEC--CCSCCEEEEEEEECSSTTEEEEGGGTEEEEEEECSSTTEEEEEEEEC---CCCEEEEEEEESSSSC
T ss_pred CCCCEEEEEEEEECCEEEEEEEEEEECCCCCEEEECCCCEEEEEEECCCCEEEEEEEEEECC-CCEEEEEEEECCCCCC
T ss_conf 99929999999928926899999996069975760389459999975751179999996048-9428999997289989
No 6
>d2h80a1 a.60.1.3 (A:11-81) Deleted in Liver Cancer 2, DLC2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.06 E-value=51 Score=11.56 Aligned_cols=21 Identities=14% Similarity=0.338 Sum_probs=10.0
Q ss_pred HHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999741498889999999999
Q gi|254781138|r 144 EEIALWEQKIDKATTASALFQE 165 (178)
Q Consensus 144 ~eA~~flk~~~~~~~~~~~y~~ 165 (178)
.||+.||+ ...-+.|.++|++
T Consensus 12 ~eAC~WLr-aaGFpqYAqlyEd 32 (71)
T d2h80a1 12 KEACDWLR-AAGFPQYAQLYED 32 (71)
T ss_dssp HHHHHHHH-HTTCHHHHHTTTT
T ss_pred HHHHHHHH-HCCCHHHHHHHHH
T ss_conf 99999999-8388489998660
No 7
>d2ysca1 b.72.1.1 (A:8-33) Amyloid beta A4 precursor protein-binding family B member 3, APBB3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.72 E-value=82 Score=10.38 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=7.9
Q ss_pred CCCCCEEEEEE
Q ss_conf 58773267877
Q gi|254781138|r 60 LPDDYIEIRFL 70 (178)
Q Consensus 60 lP~d~l~~~~~ 70 (178)
||++|..+.+.
T Consensus 2 LPpGW~~i~D~ 12 (26)
T d2ysca1 2 LPPGWRKIHDA 12 (26)
T ss_dssp CCTTEEEEEET
T ss_pred CCCCCEEEECC
T ss_conf 69630132105
No 8
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.06 E-value=93 Score=10.08 Aligned_cols=15 Identities=7% Similarity=0.401 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHHHCC
Q ss_conf 789999999987426
Q gi|254781138|r 4 DFASLLIDVSHYVEK 18 (178)
Q Consensus 4 ~Y~~L~~~I~~~l~r 18 (178)
+|.|.|+..+.|+++
T Consensus 10 TYDevk~rL~~~~~k 24 (88)
T d3buxb3 10 TYDEVKARLQKFIHK 24 (88)
T ss_dssp CHHHHHHHHGGGTTS
T ss_pred EHHHHHHHHHHHHCC
T ss_conf 599999999998459
No 9
>d2g64a1 d.96.1.2 (A:1-139) 6-pyruvoyl tetrahydropterin synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=3.54 E-value=1.1e+02 Score=9.72 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHHCCCC---CHHHHHHH
Q ss_conf 97578999999998742650---03457799
Q gi|254781138|r 1 MAKDFASLLIDVSHYVEKGG---FTYLFKNF 28 (178)
Q Consensus 1 Ma~~Y~~L~~~I~~~l~r~d---lt~~I~~F 28 (178)
|..++++||..++...++=| |...+|-|
T Consensus 64 ~viDF~~lk~~~~~i~~~lDH~~Ln~~~~~f 94 (139)
T d2g64a1 64 MVYDLAKLKKEMSLVLDTVDHRNLDKDVEFF 94 (139)
T ss_dssp CSSCHHHHHHHHHHHHHTTTTEEHHHHCGGG
T ss_pred EEEEHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 7977999886899998774145442435545
No 10
>d1b66a_ d.96.1.2 (A:) 6-pyruvoyl tetrahydropterin synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.24 E-value=1.2e+02 Score=9.45 Aligned_cols=16 Identities=13% Similarity=0.164 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 9757899999999874
Q gi|254781138|r 1 MAKDFASLLIDVSHYV 16 (178)
Q Consensus 1 Ma~~Y~~L~~~I~~~l 16 (178)
|..++++||..+.+++
T Consensus 62 ~v~Df~~lk~~~~~~I 77 (138)
T d1b66a_ 62 MVMNLTDLKEYMEEAI 77 (138)
T ss_dssp CSSCHHHHHHHHHHHT
T ss_pred EEEEHHHHHHHHHHHH
T ss_conf 4877799999999835
Done!