RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254781139|ref|YP_003065552.1| hypothetical protein
CLIBASIA_05205 [Candidatus Liberibacter asiaticus str. psy62]
         (65 letters)



>gnl|CDD|37755 KOG2544, KOG2544, KOG2544, Dihydropteroate
           synthase/7,
           8-dihydro-6-hydroxymethylpterin-
           pyrophosphokinase/Dihydroneopterin aldolase [Coenzyme
           transport and metabolism].
          Length = 711

 Score = 24.2 bits (52), Expect = 7.5
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 14  KNRDWQRIASIPVSILKDSHLLQAH 38
           K+RD   +A +   IL  +++++ H
Sbjct: 667 KDRDAATVACVTAGILFGANIVRVH 691


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.316    0.127    0.409 

Gapped
Lambda     K      H
   0.267   0.0550    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 796,501
Number of extensions: 28022
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 3
Length of query: 65
Length of database: 6,263,737
Length adjustment: 37
Effective length of query: 28
Effective length of database: 5,464,204
Effective search space: 152997712
Effective search space used: 152997712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.4 bits)