RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781139|ref|YP_003065552.1| hypothetical protein
CLIBASIA_05205 [Candidatus Liberibacter asiaticus str. psy62]
         (65 letters)



>2end_A Endonuclease V; 1.45A {Enterobacteria phage T4} (A:1-94)
          Length = 94

 Score = 24.0 bits (52), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 20 RIASIPVSILKDSHLLQAHTE 40
          RI    VS L D HL+  + E
Sbjct: 3  RINLTLVSELADQHLMAEYRE 23


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.316    0.127    0.409 

Gapped
Lambda     K      H
   0.267   0.0669    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 501,084
Number of extensions: 14929
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 3
Length of query: 65
Length of database: 4,956,049
Length adjustment: 33
Effective length of query: 32
Effective length of database: 3,840,484
Effective search space: 122895488
Effective search space used: 122895488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.2 bits)