RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781139|ref|YP_003065552.1| hypothetical protein
CLIBASIA_05205 [Candidatus Liberibacter asiaticus str. psy62]
         (65 letters)



>d2incb1 a.25.1.2 (B:8-329) Toluene, o-xylene monooxygenase
           oxygenase subunit TouE {Pseudomonas stutzeri [TaxId:
           316]}
          Length = 322

 Score = 24.4 bits (53), Expect = 2.8
 Identities = 8/49 (16%), Positives = 10/49 (20%)

Query: 2   EINQACAMATRKKNRDWQRIASIPVSILKDSHLLQAHTEGDDVWVNKWL 50
            I       T    R     A     +      +       DVW N   
Sbjct: 143 TITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDVWENDPA 191


>d2enda_ a.18.1.1 (A:) T4 endonuclease V {Bacteriophage T4 [TaxId:
          10665]}
          Length = 137

 Score = 24.0 bits (52), Expect = 3.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 20 RIASIPVSILKDSHLLQAHTE 40
          RI    VS L D HL+  + E
Sbjct: 2  RINLTLVSELADQHLMAEYRE 22


>d1c3ha_ b.22.1.1 (A:) 30 kDa adipocyte complement-related protein
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 137

 Score = 23.4 bits (50), Expect = 5.3
 Identities = 5/26 (19%), Positives = 10/26 (38%)

Query: 39  TEGDDVWVNKWLNNRDNASWRTSEGY 64
             GD VW+  + +   N  +  +   
Sbjct: 99  EVGDQVWLQVYGDGDHNGLYADNVND 124


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.127    0.409 

Gapped
Lambda     K      H
   0.267   0.0618    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 247,460
Number of extensions: 7820
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 7
Length of query: 65
Length of database: 2,407,596
Length adjustment: 34
Effective length of query: 31
Effective length of database: 1,940,776
Effective search space: 60164056
Effective search space used: 60164056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.1 bits)