BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781141|ref|YP_003065554.1| hypothetical protein
CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62]
(196 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|150397034|ref|YP_001327501.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
gi|150028549|gb|ABR60666.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
Length = 322
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++ +A +A A+A+ + +P + + L P Y R + + AL + ++
Sbjct: 126 LETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQRLIDVS 185
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
P + EL ++ L AEN +L FP+ RE FF F+ G GF ++EM
Sbjct: 186 AEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFSQDEM 245
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV-NITTNKAKNHRRITSQEKAIQ 179
TDHR + +YA +G ++++ A K+ + P + K + + + A++
Sbjct: 246 QGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMK 305
Query: 180 KLYQTGSLYDSLEIDF 195
+L +TGS+ D+L IDF
Sbjct: 306 RLAKTGSIKDALLIDF 321
>gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040818|gb|ACT57614.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 196
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG
Sbjct: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM
Sbjct: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK
Sbjct: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
Query: 181 LYQTGSLYDSLEIDFV 196
LYQTGSLYDSLEIDFV
Sbjct: 181 LYQTGSLYDSLEIDFV 196
>gi|227822442|ref|YP_002826414.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
gi|227341443|gb|ACP25661.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
Length = 317
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+++ + +A +A A+A+LI+ IP D L PETY R L Q L + + G
Sbjct: 121 LESMSSRVAVTANAVAELISAQIPPDPPEELRLHDPETYQRQWALHQAGLKQLLRVMALG 180
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
P IA L E++L+ EN +L FPQT R+ FF + F LGF EE+
Sbjct: 181 EEPAGIAGALQDAASEERLVGENAKLLEAFPQTGQDEGRQAFFADAFEAARELGFTDEEI 240
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQ 179
++ DHRL LA+YA++GL +++ A K+ P T K + R+ +A++
Sbjct: 241 REVVDHRLFKLAHYARLGLLAKRARAKALQKVAVAPAAAPRTKAKNQAQRQQRESREAMR 300
Query: 180 KLYQTGSLYDSLEIDF 195
+L ++GS+ D++ +DF
Sbjct: 301 RLARSGSIRDAMAVDF 316
>gi|315122534|ref|YP_004063023.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495936|gb|ADR52535.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 328
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 129/198 (65%), Positives = 158/198 (79%), Gaps = 2/198 (1%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q QAKILA SA++LAQLINHH+P D P+L +T P Y I LRQ+ALNIINHFVE G
Sbjct: 131 VQKQAKILAHSADSLAQLINHHMPADPHPSLAQTDPSAYQNIINLRQQALNIINHFVEEG 190
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
R PD IAKELD+E +E KL EN+QLE++FPQTKDPAQRE+FF+N+F+IG +GFQ+EEM
Sbjct: 191 RYPDKIAKELDAEHVEIKLKNENEQLENIFPQTKDPAQRESFFQNIFKIGKKIGFQEEEM 250
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKP--FVNITTNKAKNHRRITSQEKAI 178
+I DHRLL LA+YAQ+GLQSQK+SED Y KIRHKP K+ NH RITSQ++AI
Sbjct: 251 KNIIDHRLLVLAHYAQLGLQSQKISEDVYRKIRHKPSGSSVPNRKKSCNHHRITSQQRAI 310
Query: 179 QKLYQTGSLYDSLEIDFV 196
QKL ++GS YD+L+IDFV
Sbjct: 311 QKLQKSGSFYDALDIDFV 328
>gi|160897388|ref|YP_001562970.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1]
gi|160362972|gb|ABX34585.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1]
Length = 311
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 4/196 (2%)
Query: 2 QNQAKILAQSAEAL---AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE 58
Q + + AQ+ L A+ L P+ R ++L + +
Sbjct: 113 QYERQQYAQNLHNLRVQAEAALQSQSQIDWDRLIAENPQEALRQKHLMDQRQAQLQQVYA 172
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
+ + + ++ L ++QQL P+ KD A+ + + G+ +
Sbjct: 173 EQQRVAQAIQADQRQGYQRHLSEQHQQLVDKLPEWKDEARAKAESAAIRDYLLGQGYDTD 232
Query: 119 EMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
+ + D R + +A A + Q ++ A K+ + P + + + A
Sbjct: 233 AVNSVNDSRAVVIARKAMLYDQMISKTDAATKKVANLPTKVEQPGSG-ANPNLDRRTAAF 291
Query: 179 QKLYQTGSLYDSLEID 194
QKL +TG + D+ ++
Sbjct: 292 QKLSKTGRVEDAAQVF 307
>gi|307308933|ref|ZP_07588616.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti
BL225C]
gi|306900567|gb|EFN31180.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti
BL225C]
Length = 327
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Query: 21 HHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLI 80
P+ L P Y R + ++++ +I ET + ++++ +++L
Sbjct: 153 ATQPEIDWDYLLNENPGEYVRQKEMQERRDSIARQLYETEMAMAQQREAQEAQLHQERLT 212
Query: 81 AENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQ 140
+ +P+ +D A+ + + ++ F ++E+ +++D+R+L + Y
Sbjct: 213 ESKTKFFETYPELRDSARAKEAQVGMTQLLIDASFDQQELENLSDYRMLDILYRLWKAEN 272
Query: 141 SQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
+ K+ KP + + K + + +EK K Q+G+L D+ +
Sbjct: 273 TAKIVPQVVKNFEQKPNI---SAKEPSRKNFDHREKNWSKFKQSGNLDDAAAL 322
>gi|283856245|ref|YP_162118.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775240|gb|AAV89007.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4]
Length = 283
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 9/189 (4%)
Query: 12 AEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELD 71
A+ LA+ P P L + P +Y + + V+ + +
Sbjct: 89 ADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEMAE 148
Query: 72 SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSL 131
E+Q+L L P+ D QR G LG+ + ++ D +
Sbjct: 149 LAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGY-PDHVLAEADSNDIMA 207
Query: 132 AYYA-------QIGLQSQKLSEDAYHKIRHKPF-VNITTNKAKNHRRITSQEKAIQKLYQ 183
A + Q+ A + T++ + +++ +L +
Sbjct: 208 LKKAHEWRRKSEKWDALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQLRE 267
Query: 184 TGSLYDSLE 192
TG + +
Sbjct: 268 TGDVRSAAA 276
>gi|167583565|ref|YP_001671755.1| scaffolding protein [Enterobacteria phage phiEco32]
gi|164375403|gb|ABY52811.1| scaffolding protein [Enterobacteria phage phiEco32]
Length = 361
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 48/166 (28%), Gaps = 8/166 (4%)
Query: 27 SSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQL 86
L P+ Y + +K N + A + E + K + L
Sbjct: 196 DWDKLAVEDPQAYVENKRFLEKYTARRNQLEQAQVRIKQEAAAKEQEAFQAKSVECVNIL 255
Query: 87 EHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSE 146
+ P EN ++NL + LG +EE++ + + A + ++
Sbjct: 256 KREIPNWD-----ENLYQNLMQYAIDLGATEEEVLKENRPSIFLALHKAYQFDKGKQQVM 310
Query: 147 DAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSL--YDS 190
+ V + K + + G + D+
Sbjct: 311 AKIKRPGAPRKVVKSDAAKSRTSNKPDNAKVAKAFAE-GRVSHEDA 355
>gi|241760936|ref|ZP_04759025.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753096|ref|YP_003225989.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|241374555|gb|EER64016.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552459|gb|ACV75405.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 283
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 9/189 (4%)
Query: 12 AEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELD 71
A+ LA+ P P L + P +Y + + V+ + +
Sbjct: 89 ADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEMAE 148
Query: 72 SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSL 131
E+Q+L L P+ D QR G LG+ + ++ D +
Sbjct: 149 LAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGY-PDHVLAEADSNDIMA 207
Query: 132 AYYA-------QIGLQSQKLSEDAYHKIRHKPF-VNITTNKAKNHRRITSQEKAIQKLYQ 183
A + Q+ A + T++ + +++ +L +
Sbjct: 208 LKKAHEWRRKSEKWDALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQLRE 267
Query: 184 TGSLYDSLE 192
TG + +
Sbjct: 268 TGDVRSAAA 276
>gi|291334406|gb|ADD94062.1| hypothetical protein [uncultured phage MedDCM-OCT-S01-C1]
Length = 367
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 57/199 (28%), Gaps = 9/199 (4%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
Q + + E L + L T P + + + + +
Sbjct: 165 QLQQIRGLGEMLQNKLMQEFQGIDWDRLRVTDPGEWTAKQREFEIRNQELQQAGQMLGEQ 224
Query: 64 DNIAKELDSEILEK----KLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
E S+ + L +E +++ P +D + + + GF +E
Sbjct: 225 MKAQNEQQSQQHAQERSVILNSEREKMIENNPSWRDEEKMKGDLTKIVEYAKSNGFADDE 284
Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV-----NITTNKAKNHRRITSQ 174
+ D+ R + + A + Q + ++ + + + K ++ I
Sbjct: 285 LSDVIHSRHVEVLRKAYLYDQGKTVASKKVKQAPNMQRASNGRFVKGSKNGKVNKLIERA 344
Query: 175 EKAIQKLYQTGSLYDSLEI 193
+ A + +
Sbjct: 345 QNAKGANKRDAQADAVAAL 363
>gi|221199510|ref|ZP_03572554.1| putative response regulator receiver [Burkholderia multivorans
CGD2M]
gi|221205588|ref|ZP_03578603.1| putative response regulator receiver [Burkholderia multivorans
CGD2]
gi|221174426|gb|EEE06858.1| putative response regulator receiver [Burkholderia multivorans
CGD2]
gi|221180795|gb|EEE13198.1| putative response regulator receiver [Burkholderia multivorans
CGD2M]
Length = 325
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 45/166 (27%)
Query: 16 AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEIL 75
A + L P Y R R+ + + + E ++
Sbjct: 145 AHEALMAEQQPNWERLLAENPTEYVRARHAWEARQRQMLEARQVQEVLAQRNAEAEAVSK 204
Query: 76 EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYA 135
++L +L P DP + E + + + G +I +L +A A
Sbjct: 205 RRRLDEAQTKLIQANPTWADPKKAEEGARAIDQYLESQGIPANVRSNIDSAEVLLIAQKA 264
Query: 136 QIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKL 181
+ Q+ + A A+ + +K
Sbjct: 265 MLYDQAIARQKAAQQGGNQPVPRVARPGPARTTTKTQQARANAEKA 310
>gi|291334639|gb|ADD94287.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C64]
gi|291334837|gb|ADD94477.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041]
Length = 377
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 6/198 (3%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ A+ AQ + Q + + L+ T P+ + R + N I + +T
Sbjct: 169 EQSAQQNAQILNLVEQQLMTDFNNVPWDNLKTTDPQQWSIKRQEFTERQNAIQNIRQTAA 228
Query: 62 NPDNIA----KELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
K + ++ L E + L P KD R L G+
Sbjct: 229 QQYQQKLDAGKVEQQKQMQDLLQREQESLYRALPTFKDEETRNAEQVKLTNYLLTQGYSN 288
Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKL--SEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
+E+ + DHR L LA+ A ++ + K + ++K + I +
Sbjct: 289 DELQTVYDHRTLVLAHKAMQFDSMKEKGETAKKKVAKIGKKVLKPGAKQSKKQQTIDADA 348
Query: 176 KAIQKLYQTGSLYDSLEI 193
K +L +TG D+ +
Sbjct: 349 KLRARLKETGDHRDAAAL 366
>gi|167600436|ref|YP_001671936.1| scaffolding protein [Pseudomonas phage LUZ24]
gi|161168299|emb|CAP45464.1| scaffolding protein [Pseudomonas phage LUZ24]
Length = 330
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 9/200 (4%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDS---SPTLEKTYPETYHRIRYLRQKALNIINHFV 57
+ + L E A L+ PE Y +R +A + +
Sbjct: 128 LDAERSNLLAELEQYAVTAIAGANQYDNVNWEQLKAQDPEKYQTLRLEALEARDRAQALI 187
Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
+ + + ++ I + + + + L P+ ++ + G +G+ +
Sbjct: 188 KRRNDIKAMQEKRAEIIHSAYVKRQTELAKKLIPEMTTDE---SWGDKIVSYGKSIGYSE 244
Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH---KPFVNITTNKAKNHRRITSQ 174
+E+ I+D R L++ A+ +SQ + A K V +A+
Sbjct: 245 DEIRGISDARQLAVLDAARKWAESQVRRKAALEKKEETELPAAVKPAARRAEASEGSKRV 304
Query: 175 EKAIQKLYQTGSLYDSLEID 194
+ A L + S+ + +
Sbjct: 305 KAARANLRKDQSVEAAAALF 324
>gi|27476050|ref|NP_775252.1| putative scaffold protein [Pseudomonas phage PaP3]
gi|27414480|gb|AAL85566.1| ORF.06 [Pseudomonas phage PaP3]
Length = 334
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 12/203 (5%)
Query: 1 MQNQAKILAQSAEALAQLINH------HIPDDSSPTLEKTYPETYHRIRYLRQKALNIIN 54
+++ A L Q + L+ PE Y ++R +A +
Sbjct: 129 LESVDAERANLLAELEQYTVTAIAGANQYDSINWEQLKAQDPEKYQKLRLEALEARDQAQ 188
Query: 55 HFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILG 114
++ + + ++ I + + + + L P+ + + G +G
Sbjct: 189 ALIKRRNDIKAMQEKRAEIIHSSYIKRQTELAKKLIPEMTTDE---TWGDKIVAYGKSIG 245
Query: 115 FQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH---KPFVNITTNKAKNHRRI 171
+ ++E+ I D R L++ A+ +SQ + A K V +A+
Sbjct: 246 YSEDEIRGIADARQLAVLDAARKWAESQVRRKAALEKKEETELPAAVKPVARRAEASEGS 305
Query: 172 TSQEKAIQKLYQTGSLYDSLEID 194
+ A L + S+ + +
Sbjct: 306 KRVKAARANLRKDQSVEAAAALF 328
>gi|316934286|ref|YP_004109268.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1]
gi|315602000|gb|ADU44535.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1]
Length = 350
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 73/200 (36%), Gaps = 7/200 (3%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT-YP-ETYHRIRYLRQKALNIINHFVET 59
+ + +LAQS L + + P + L P + + +R A
Sbjct: 140 EQNSVLLAQSKALLDRAKERYAPYANIDLLAAAKNPDISAEELVAVRNAAKAAYEDVQYL 199
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEHLF-PQTKDPAQRENFFKNLFRIGNILGFQKE 118
IA+ L S+ ++ + L L P+ + + ++ G +
Sbjct: 200 ETETSRIAEALRSQARQELMERAKDCLVTLTDPEKGIEGFDQKMYGDICSFAVEQGLPAD 259
Query: 119 EMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR----RITSQ 174
+ D+ D + L A++ L+ Q++ + A + P + + + + +
Sbjct: 260 LVNDLVDPTAIKLINMARLYLKGQQVVQTAKSDKKKAPKRIVKSTASPDQTRKVIKTAKA 319
Query: 175 EKAIQKLYQTGSLYDSLEID 194
+ +++L +GS+ D+ +
Sbjct: 320 AEPMKRLKTSGSVDDASDAF 339
>gi|291334596|gb|ADD94246.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C136]
Length = 90
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 107 FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK 166
N GF +++ I D R + ++ K++ V K
Sbjct: 1 MGYLNSKGFTNDDVSRIYDSRYFDVIMDGMKANATKPN--LVSKKVKPTTVVKSGVKTTK 58
Query: 167 NHRRITSQEKAIQKLYQTGSLYDSLEI 193
S+ K I L ++G+ D+ ++
Sbjct: 59 EDLNSQSRLKKINALKKSGNAKDATDL 85
>gi|294083944|ref|YP_003550701.1| hypothetical protein SAR116_0374 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663516|gb|ADE38617.1| hypothetical protein SAR116_0374 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 337
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 53/157 (33%), Gaps = 5/157 (3%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
E + ++R +A + E ++ + + + L+ P +
Sbjct: 178 EDFAQLRKEATEAFQDLQFLNEEADTYFGELQKQQQAAVNEAAKECVKVLQDQIPDWSNE 237
Query: 97 AQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKP 156
+ ++ + G ++ + I D ++ + +++ Q +K++ + K
Sbjct: 238 -----MYSDIRQYAISQGLPEDNVNQIVDPNVIMILNKSRLFDQGKKVATVKKKTAQKKV 292
Query: 157 FVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
+ + + RR + K + L + D +
Sbjct: 293 LRSKKSPPNEAIRRKANLAKQQEALRSSRDTDDIANV 329
>gi|221271430|dbj|BAH15183.1| scaffolding protein [Serratia phage KSP100]
Length = 330
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/167 (9%), Positives = 49/167 (29%), Gaps = 11/167 (6%)
Query: 2 QNQAKILAQSAEAL------AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINH 55
A A ++ L A + L + PE + + + ++
Sbjct: 136 DEYASQYADLSDKLKLAKLEADDVLEKFEGFDWNALLQESPEEFGKTKMFVERYQKRSQE 195
Query: 56 FVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + + + ++K + + L+ + N + + G
Sbjct: 196 IQKAMNDLNAKEAKKVEAENQEKALNCVRSLQKNIAGWNN-----NLYHEILEYAVNSGV 250
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT 162
++ + TD ++ Y + + + + + K P ++
Sbjct: 251 DEKYITTCTDASVIKAFYDSMRLAKGENVVKAKVKKAVRSPSRVLSA 297
>gi|123480039|ref|XP_001323175.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121906034|gb|EAY10952.1| hypothetical protein TVAG_260380 [Trichomonas vaginalis G3]
Length = 1859
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/156 (10%), Positives = 49/156 (31%), Gaps = 11/156 (7%)
Query: 24 PDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAEN 83
+ +++ + + R++ L + E + +E ++K ++
Sbjct: 707 QQQDADRIKEEDQKRKIEKQKEREEKLRQMQKEKEERQRQLQKEREEKQRQIQK---EKD 763
Query: 84 QQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQK 143
++L+ L + K+ QR++F + E + L + +I +
Sbjct: 764 EKLKQLLKE-KEEKQRQSFDSEV-------DIPDLETSSPLEEESLHSSPKEKIKRSEKS 815
Query: 144 LSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
+ + + S+++A
Sbjct: 816 QKPSKLKRSMSFSSSEDEEERKPQKSKSKSEKEAKS 851
>gi|291231503|ref|XP_002735704.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 3906
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 49/156 (31%), Gaps = 9/156 (5%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
R + + + E + + +L +QL+ ++ ++
Sbjct: 2686 LRKKLRAASSDAERERILLEYAQQMQRLSEKQEQEKQTQLEKLQKQLKDR----RNRQKK 2741
Query: 100 ENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVN 159
+ K + G + E++ D+TD L Q+ A + + +
Sbjct: 2742 DLHRKQVSE-AKSEGLKDEDVPDMTDPSDAQQ-DKEFRLLALQQEKLLAELQKAYAEEME 2799
Query: 160 ITTNKAKNHRRITSQEKAIQK---LYQTGSLYDSLE 192
N + ++ +A + L + ++L+
Sbjct: 2800 KAANNEARKSEMDAEMEARMRALNLANKQKVDEALD 2835
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 45/171 (26%), Gaps = 26/171 (15%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLE------------ 87
+ + + E E + L+ + + + L
Sbjct: 2697 AERERILLEYAQQMQRLSEKQEQEKQTQLEKLQKQLKDRRNRQKKDLHRKQVSEAKSEGL 2756
Query: 88 --HLFPQTKDPAQRENFFK----NLFR---IGNILGFQKEEMVDITDHRLLSLAYYAQIG 138
P DP+ + + L + + + EEM ++ A++
Sbjct: 2757 KDEDVPDMTDPSDAQQDKEFRLLALQQEKLLAELQKAYAEEMEKAANNEARKSEMDAEME 2816
Query: 139 LQSQKLSEDAYHKIRHK-----PFVNITTNKAKNHRRITSQEKAIQKLYQT 184
+ + L+ K+ + KN + K ++ ++
Sbjct: 2817 ARMRALNLANKQKVDEALDSLNKKNAQNKDMRKNMKDRMKARKDRKRDKKS 2867
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 45/159 (28%), Gaps = 39/159 (24%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ + K L + + + R R ++++ NI + F +
Sbjct: 3318 ETKMKTLKEQMDQIK----AEKKKQDDE-----------RRRKMQEQLKNIEDEFEKQRL 3362
Query: 62 NPDNIAKE---LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
+ KE ++ +++ ++L D E+ K +
Sbjct: 3363 RDEQRIKERDLEREQLRQQQREEREKRLRSDL----DKETDESKKKKI------------ 3406
Query: 119 EMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
+ DH A+ A + Q+ A K
Sbjct: 3407 ----LADHEAAMKAWDANQ-KKEQEKQSRATRKKLEARR 3440
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 39/152 (25%), Gaps = 14/152 (9%)
Query: 43 RYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF---------PQT 93
QK L +E + KE + L+++ +++ +
Sbjct: 3063 DDEYQKLLEKHRQEMERLAAAMDQEKERQKKSLQERFAERKKKMAEHLRKKHQAEMEKEL 3122
Query: 94 KDP--AQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHK 151
+ + K + G E+ D ++ Y ++
Sbjct: 3123 GQQHMEREKKIEKEMR--GKERPAIDSELQGE-DVSAENVIYRVLRQRHIKETVNQNEKM 3179
Query: 152 IRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ R + +++ ++ Q
Sbjct: 3180 KHERNAAIADARNKMEEARQSERDELLEAQRQ 3211
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 45/148 (30%), Gaps = 11/148 (7%)
Query: 45 LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP------AQ 98
A + ++ + KE++++ + E+Q+ E + + D +
Sbjct: 2987 ELNNASKQVEKQMQKQVELEVQQKEVENKAQKDLDDEESQETEKINREIVDEKNRIIAKK 3046
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITD-HR-LLSLAYYAQIGLQSQKLSEDAYHKIRHKP 156
F K + +E + + HR + A + ++ K
Sbjct: 3047 DAAFEKEML--LKRKQLSDDEYQKLLEKHRQEMERLAAAMDQEKERQKKSLQERFAERKK 3104
Query: 157 FVNIT-TNKAKNHRRITSQEKAIQKLYQ 183
+ K + ++ +++ +
Sbjct: 3105 KMAEHLRKKHQAEMEKELGQQHMEREKK 3132
>gi|326433435|gb|EGD79005.1| hypothetical protein PTSG_01976 [Salpingoeca sp. ATCC 50818]
Length = 6230
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 47/148 (31%), Gaps = 18/148 (12%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETY-HRIRYLRQKALNII------- 53
Q Q K L+Q +A + + + R+R +++A +
Sbjct: 5468 QAQMKELSQKVDA-EITEAQQKAEADLQKRREESMQAAEQRMREEQERAKAQLSPEEFEK 5526
Query: 54 -----NHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFR 108
+ ++ + ++ + L+++L + ++ + E F + +
Sbjct: 5527 FMNKHRQQLSEVQSRLDKTQQAQRQALQERLKKQRERRRKA----NESKLEEQFTTEMSK 5582
Query: 109 IGNILGFQKEEMVDITDHRLLSLAYYAQ 136
+ +M + ++L A
Sbjct: 5583 QSEEREQLQSDMERANEEKVLRAAVKDM 5610
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 18/86 (20%), Gaps = 9/86 (10%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQ-----KALNIINH 55
++ + + + EA PD + + + +
Sbjct: 5749 LELKQRQYNEMVEAFKNF----SPDSEVHAQYEEAANQAKEAAEEYKKRLGAERQEQMKK 5804
Query: 56 FVETGRNPDNIAKELDSEILEKKLIA 81
E E ++ L
Sbjct: 5805 LKEEQERLRKERHEKMEAERKRVLQE 5830
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 7 ILAQSAEAL-AQLINHHIPDDSSPTLEK-TYPETYHRIRYLRQKALNIINHFVETGRNPD 64
LA++ + L + + ++++ L + R + + ++ R
Sbjct: 5323 ELARTQQQLVKEFVAEDKQEEAAQMLREHQERMQQVRDKVHSDQRDKVMARIAAQKRLAA 5382
Query: 65 NIAKELDSEILEKKLIA 81
+E + ++KL A
Sbjct: 5383 QRRRERMQKQQQEKLAA 5399
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 58/219 (26%), Gaps = 46/219 (21%)
Query: 9 AQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQK-ALNIINHFVETGRNPDNIA 67
AQ EA Q ++ L E +++ +++ +
Sbjct: 5774 AQYEEAANQ--AKEAAEEYKKRLGAERQEQMKKLKEEQERLRKERHEKMEAERKRVLQEL 5831
Query: 68 KELDS------------------EILEKKLIAENQQLEHL------------FPQTKD-- 95
+ E + ++ E ++L+ +D
Sbjct: 5832 EAERQKQEQLMQQKQQRNKKKMMEQMRQQQAHELEKLDEAQRQEVMERHRRGLKNLEDAL 5891
Query: 96 PAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLS----------LAYYAQIGLQSQKLS 145
++++ + N L +K+E +A ++ Q
Sbjct: 5892 ESEQDRQRQKFRERLNALKARKQEARLRELEEKEEEEQARAEEEFMAKELELQQQLHSQV 5951
Query: 146 EDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQT 184
+ K +P K K ++ +K Q+ ++
Sbjct: 5952 QATVRKRDLRPTTPFVAGKGKKAKQPGGAKKQGQR-RKS 5989
>gi|159491050|ref|XP_001703486.1| centriole proteome protein [Chlamydomonas reinhardtii]
gi|158280410|gb|EDP06168.1| centriole proteome protein [Chlamydomonas reinhardtii]
Length = 3124
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/92 (8%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++++ + Q AEA Q + + R + + + + +
Sbjct: 1838 LEDEQQRQKQEAEAKMQQLEDEQQRQKDEQQRQKD--ELQRQKQEAEAKMQQLEDEQQRQ 1895
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQ 92
++ K+ ++ + P
Sbjct: 1896 KDEQQRQKDELQRQKQEAEAKMQKFRAERSPD 1927
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 9/107 (8%), Positives = 31/107 (28%), Gaps = 9/107 (8%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q Q + + L + + + R + +Q+ + + +
Sbjct: 1824 LQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLED--EQQRQKDEQQRQKDELQRQKQEA 1881
Query: 61 RNPDNI--AKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKN 105
++ + +++ E Q+ + A+ + F
Sbjct: 1882 EAKMQQLEDEQQRQKDEQQRQKDELQRQKQEA-----EAKMQKFRAE 1923
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 35/117 (29%), Gaps = 13/117 (11%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ Q + Q + D + ++ +Q+A + + +
Sbjct: 1784 EQQRQKDEQQRQKQEVWAKMQQLQDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQ 1843
Query: 62 NPDNIAKELDSEILEKK-------------LIAENQQLEHLFPQTKDPAQRENFFKN 105
A+ ++ +++ L + Q+ E Q +D QR+ +
Sbjct: 1844 RQKQEAEAKMQQLEDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKDEQQ 1900
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 48/152 (31%), Gaps = 7/152 (4%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
Q + + + +++ + R + +Q+ + + + ++
Sbjct: 1782 QDEQQRQKDEQQRQKQEVWAKMQQLQ-DEQQRQKDEQQRQKDELQRQKQEAEAKMQQLED 1840
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
++ A+ QQLE + KD QR+ + +M + D +
Sbjct: 1841 EQQRQKQE-AEAKMQQLEDEQQRQKDEQQRQKDELQ-----RQKQEAEAKMQQLEDEQQR 1894
Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNIT 161
+ + Q+ ++A K++
Sbjct: 1895 QKDEQQRQKDELQRQKQEAEAKMQKFRAERSP 1926
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+++ + + Q + R + + + + + +
Sbjct: 1814 KDEQQRQKDELQRQKQEAEAKMQQLEDEQ---------QRQKQEAEAKMQQLED-EQQRQ 1863
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
+ ++ + + +++ A+ QQLE + KD QR+
Sbjct: 1864 KDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKDEQQRQK 1903
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 52/173 (30%), Gaps = 38/173 (21%)
Query: 36 PETYHRIRYLRQKALNIINHFVETGRNPDNIAKEL--------------------DSEIL 75
P + +R L + + + + + + + + +
Sbjct: 1761 PPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQEVWAKMQQLQDEQQRQKDEQQRQ 1820
Query: 76 EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYA 135
+ +L + Q+ E Q +D QR+ + + E+ + +
Sbjct: 1821 KDELQRQKQEAEAKMQQLEDEQQRQKQEAE----AKMQQLEDEQQRQKDEQQ-------- 1868
Query: 136 QIGLQSQKLSEDAYHKI------RHKPFVNITTNKAKNHRRITSQEKAIQKLY 182
+ + Q+ ++A K+ + + K + R+ E +QK
Sbjct: 1869 RQKDELQRQKQEAEAKMQQLEDEQQRQKDEQQRQKDELQRQKQEAEAKMQKFR 1921
>gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
Length = 7662
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 54/154 (35%), Gaps = 7/154 (4%)
Query: 40 HRIRYLRQKALNIIN-HFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
++ + + E + A+E ++ LE+ + +LE + + A
Sbjct: 6930 AELKEKHLEDQIKLRLEHREEMAEIERQAQEEQNKALEEIVEGMAAKLEEEDVEFQKKAA 6989
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA-YYAQIGLQSQKLSEDAYHKIRHKPF 157
+ +L ++E+ + ++ + +A + Q+ + ++ ++ K
Sbjct: 6990 EAKEKLSAEEFQKMLDDHEKELESMQQNQEIEIAKHRDQLNSKLEERRRRKQQQLARKQE 7049
Query: 158 VNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSL 191
+ + K + + A ++ + D+
Sbjct: 7050 IEMQ-KKLLQQQAEADRLNAEREAKK----EDAA 7078
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/188 (10%), Positives = 52/188 (27%), Gaps = 23/188 (12%)
Query: 1 MQNQAKILAQSAEALAQLIN-----HHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINH 55
+ + + LA E +A+ + + K +I+ ++KA
Sbjct: 7226 LSSSMQELAGQRELIAEYTDRTNEATRTAQQDREKIMKEMEAKLEKIKAEKRKAQEKQRA 7285
Query: 56 FVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ +L+ E+ L + + + + + E +
Sbjct: 7286 ELAQQLEALQDELQLEQSKDEQYLEEQIAE-REKVHEEQRKKKDELMKSKI----EKEDL 7340
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
++E + + + E A R + + RR +
Sbjct: 7341 NEDEKQKLIE-----------QHQRDLAELEIAQQ--REREKSRGALKRKLEERRKKKYQ 7387
Query: 176 KAIQKLYQ 183
A+ +L +
Sbjct: 7388 AAVNQLEK 7395
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 13/181 (7%), Positives = 40/181 (22%), Gaps = 30/181 (16%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
A+ + + + + + + R L +
Sbjct: 6996 SAEEFQKMLDDHEKELESMQQNQE---------IEIAKHRDQLNSKLEERRRRKQQQLAR 7046
Query: 64 DNIAKEL----DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
+ + +L AE + + L L E
Sbjct: 7047 KQEIEMQKKLLQQQAEADRLNAERE--------------AKKEDAALAETIKELKNSDNE 7092
Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
R +L Y+ +++ + + + +++K ++
Sbjct: 7093 NES---KRAENLIYHVMQQRHAKETLQHEEQLKKELATALAEAQNNVATKCQDNRDKLVE 7149
Query: 180 K 180
+
Sbjct: 7150 Q 7150
>gi|299473300|emb|CBN77699.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 6779
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 67/213 (31%), Gaps = 23/213 (10%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLR-----QKALNIINH 55
++ Q ++ + + +A P+ + L++ + ++ +
Sbjct: 6150 LEQQLELRQRQLQEIAGTFRAIAPESALERLQEINATRHEEELENFHAAMEREKEERLKR 6209
Query: 56 FVETG-----------RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFK 104
E + + ++L+ + A+ +L+ + QRE +
Sbjct: 6210 LQEERSKFEEQLRQRHDAEMQRLQAEEQKVLDVEREAQEARLKEKQAEL--ERQREEEKR 6267
Query: 105 NLFRIGNILGFQKEEMV----DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNI 160
+ + L ++E + + L + +S+ + A + + +
Sbjct: 6268 KMEERSDQLNASQKEALLEQFKLDQAAELGALKAEEQSSKSKLEQKLAARRQKKTEEMRK 6327
Query: 161 TTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
+ + ++ + QT L D+ E+
Sbjct: 6328 REERQLKEKETRDAQRLQEIERQT-QLEDAAEV 6359
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 8/146 (5%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
+ +K + + + A+ + +E + E LE + K A+R
Sbjct: 5448 AKRLAELKKVKAKDDEVQDELARLEQEAEREQ-KQVEADIEQEAAILEQA--EAKMLAKR 5504
Query: 100 ENFFKNLFRIGNILGFQKE-EMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ E E+ I +I ++Q+ + +
Sbjct: 5505 AAEARATRLTAESSRRAGELELQKIRQAHE----ENQRILEEAQESKRKLRQRTLAERLE 5560
Query: 159 NITTNKAKNHRRITSQEKAIQKLYQT 184
K +A QKL +
Sbjct: 5561 RRRQEKMNASIAALESAEAQQKLAAS 5586
>gi|190341571|gb|ACE74862.1| RecN [Enterobacter sp. OD1121_04]
Length = 553
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q+ + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQRMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQT + + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLEYQLKELNEFSPQTGEFELIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|190341507|gb|ACE74830.1| RecN [Enterobacter cancerogenus]
Length = 553
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAQHQQQSQERTARAELLEYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSISQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|190341545|gb|ACE74849.1| RecN [Enterobacter ludwigii]
Length = 553
Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q+ + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQRMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLEYQLKELNEFSPQAGEFELIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|326433499|gb|EGD79069.1| hypothetical protein PTSG_02037 [Salpingoeca sp. ATCC 50818]
Length = 5390
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/175 (9%), Positives = 43/175 (24%), Gaps = 27/175 (15%)
Query: 6 KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDN 65
+ + + + Q +N + + + E + +
Sbjct: 4708 QEMNRLMKQHEQQLNTLSARMDVERNRQQELI-----KAKLAERKQKRKKLQEQRQEVEL 4762
Query: 66 IAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITD 125
+ + L E RE + + G E +V
Sbjct: 4763 QREIATQRQETEALKHEQ--------------VREAEREAMVTSLQQTGKDAETVVA--- 4805
Query: 126 HRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
+ +A + Q++ E + T + ++ R+ + +K
Sbjct: 4806 --SVLQRRHA---QELQQIREQVEAEQDVALKELKATIQERHEARLDERATRYEK 4855
>gi|190341541|gb|ACE74847.1| RecN [Enterobacter hormaechei ATCC 49162]
Length = 553
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAQHQQQSQERTARAELLEYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|295097183|emb|CBK86273.1| DNA replication and repair protein RecN [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 553
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAQHQQQSQERTARAELLEYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQTALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|190341501|gb|ACE74827.1| RecN [Enterobacter asburiae]
Length = 553
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLVKPEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLAYQLKELNEFNPQPGEFEQIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|296813795|ref|XP_002847235.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842491|gb|EEQ32153.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 795
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Query: 9 AQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK 68
A EA+ Q + + + E R R Q+ E A+
Sbjct: 3 ASELEAIRQELE---NEKRLRQQAEQDRERAERDREQAQQDREKAEQDRERAERDREQAQ 59
Query: 69 ELDSEILEKKLIAENQQLEHLFPQTKD 95
+ E + + IAE + + P+ +
Sbjct: 60 QDKEEAEQGRKIAERRIQQTTLPEFLN 86
>gi|160897767|ref|YP_001563349.1| mechanosensitive ion channel protein MscS [Delftia acidovorans
SPH-1]
gi|160363351|gb|ABX34964.1| MscS Mechanosensitive ion channel [Delftia acidovorans SPH-1]
Length = 1127
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 6 KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDN 65
IL Q A+ A+ + + T + R ++AL + E
Sbjct: 157 SILQQRAQENAEPVTAEPGEAPDLTQARQ-----ARRSAEHRRALLELALRQEEQSTI-- 209
Query: 66 IAKELDSEILEKKLIAENQQLEHLFP--QTKDPAQRENFFKNLFRIGNILGFQKEEMVDI 123
E +L +L A+ ++L P E + L + + +
Sbjct: 210 ---EARQRLLAAQLQAQRRELLERMPRAAWLTQRIAERSRQQLEQQVQEMELAAQHASAA 266
Query: 124 TDH-RLLSLAYYAQIGLQSQKLSEDAYHKIR 153
R L+ A + +E A +
Sbjct: 267 DPAIRDLAQRNAALAAQILKNSNELAQERKT 297
>gi|242813572|ref|XP_002486193.1| transcription initiation factor tfiid, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714532|gb|EED13955.1| transcription initiation factor tfiid, putative [Talaromyces
stipitatus ATCC 10500]
Length = 714
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 60/194 (30%), Gaps = 24/194 (12%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYH-RIRYLRQKALNIINHFVET 59
++ K + + ++ +P + + Y ++ + L +N
Sbjct: 254 VEQIMKNNGVILQIQEETVDQQLPLGETSAGKVI--LDYVNKLSKKWDQELAQLN----E 307
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
+ +++++++ L E ++L+ NL + + L + +
Sbjct: 308 DLRQAREKADQEAKLMQELLQEEKKKLQEEI------ELASQDRANLQKTLSDLAQENKR 361
Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
M D+ + L G + +K + P N + + + Q
Sbjct: 362 MADLLNLLKLDN----AEGDRREKERDKNKADKNAAPV---GPNIGQKTPTTSFAHELYQ 414
Query: 180 KLYQ----TGSLYD 189
L + TG D
Sbjct: 415 TLDRENYNTGRFSD 428
>gi|261342046|ref|ZP_05969904.1| DNA repair protein RecN [Enterobacter cancerogenus ATCC 35316]
gi|190341505|gb|ACE74829.1| RecN [Enterobacter cancerogenus]
gi|288315702|gb|EFC54640.1| DNA repair protein RecN [Enterobacter cancerogenus ATCC 35316]
Length = 553
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKALLD--GYAGEYALTQLMADHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLEYQLKELNEFNPQPGEFEQIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|190341503|gb|ACE74828.1| RecN [Enterobacter asburiae]
Length = 553
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLVKPEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLAYQLKELNEFNPQPGEFEQIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|37523542|ref|NP_926919.1| hypothetical protein gll3973 [Gloeobacter violaceus PCC 7421]
gi|35214546|dbj|BAC91914.1| gll3973 [Gloeobacter violaceus PCC 7421]
Length = 247
Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Query: 27 SSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNI-AKELDSEILEKKLIAENQQ 85
T ++Y E R R +A + + + + ++ + +
Sbjct: 174 PDGTPFESYVEMAARAEQERLRAEQERQRAEQERQRAEQERQRAEQERQRAEQAEQQALR 233
Query: 86 LEHLFPQTKDPAQR 99
L + Q
Sbjct: 234 LAQRLRELGIDPQA 247
>gi|28386250|gb|AAH46418.1| Cdc42bpg protein [Mus musculus]
Length = 853
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 45/178 (25%), Gaps = 21/178 (11%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSP---------------TLEKTYPETY-HRIRYLRQK 48
A +A+ E+L + +P LE R + Q+
Sbjct: 3 ATKMAEELESLRNVGTQTLPTRPLDHQWKARRLQKMEASARLELQSALEAEIRAKQSLQE 62
Query: 49 ALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR----ENFFK 104
L + A E S+ L++++ ++L+ P P+ +F+
Sbjct: 63 QLTQVQEAQRQAERRLQEA-EKQSQALQQEVAELREELQARGPGDARPSTSLIPLLSFWN 121
Query: 105 NLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT 162
G E + L + A P +
Sbjct: 122 TEKDSAKDPGNSGEGPRSGAEAELRPEGRRSLRMGSVFPRVPAATTTPAEGPPAKPGS 179
>gi|190341569|gb|ACE74861.1| RecN [Enterobacter sp. KM877_04]
Length = 553
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKTLLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLEYQLKELNEFSPQAGEFELIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|320590539|gb|EFX02982.1| elongation factor 2 [Grosmannia clavigera kw1407]
Length = 1775
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 33 KTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
+ E + R + QK + E L+ + E Q+L
Sbjct: 1386 EMDMEDFLRRQEEAQKRHEEREQLKQELER-KRQELEQRQRSLQARQREERQRLIAKM 1442
>gi|190341543|gb|ACE74848.1| RecN [Enterobacter kobei]
Length = 553
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLVKPEQQKALLD--GYAGEYALTQLMAEHYRLWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLAYQLKELNEFNPQAGEFEQIDEEYKRLANSGHLLSTSQNALN 232
Query: 122 DITD 125
+ D
Sbjct: 233 MLAD 236
>gi|197286358|ref|YP_002152230.1| autotransporter [Proteus mirabilis HI4320]
gi|194683845|emb|CAR44966.1| putative autotransporter [Proteus mirabilis HI4320]
Length = 988
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 14/160 (8%), Positives = 46/160 (28%), Gaps = 10/160 (6%)
Query: 16 AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVET-GRNPDNIAKELDSEI 74
+ N + + ++ E + + Q+ L + E + + +
Sbjct: 521 DKYFNTEQQEIADEKDKQAEQEKAEQEKAE-QERLARLQAEQEKTEQERLARLQAEQEKA 579
Query: 75 LEKKLIAEN-QQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAY 133
++K E +L+ + + E + ++E + + + +
Sbjct: 580 KQEKAEQERLARLQ------AEQEKAEQERLARLQ-AEQEKAEQEHLARLQAEQEKAEQE 632
Query: 134 YAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITS 173
++L +++ AK+ I+
Sbjct: 633 RLARLQADKELPPVEDEQVQQAKAKVKEKETAKSSTAISK 672
Score = 41.9 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 10/150 (6%), Positives = 37/150 (24%), Gaps = 22/150 (14%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKA-LNIINHFVETG 60
+ + ++ + + L + + + ++KA +
Sbjct: 540 EQEKAEQEKAEQERLARLQAEQEKTEQERLAR---LQAEQEKAKQEKAEQERLARLQAEQ 596
Query: 61 RNPDNIA----KELDSEILEKKLIA--------ENQQLEHL-----FPQTKDPAQRE-NF 102
+ + + ++ L E ++L L P +D ++
Sbjct: 597 EKAEQERLARLQAEQEKAEQEHLARLQAEQEKAEQERLARLQADKELPPVEDEQVQQAKA 656
Query: 103 FKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + ++ + L
Sbjct: 657 KVKEKETAKSSTAISKPIDVENSYKSMQLM 686
>gi|148701286|gb|EDL33233.1| mCG130283 [Mus musculus]
Length = 1550
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 47/182 (25%), Gaps = 21/182 (11%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSP---------------TLEKTYPETY-HRIRY 44
+Q A +A+ E+L + +P LE R +
Sbjct: 697 LQALATKMAEELESLRNVGTQTLPTRPLDHQWKARRLQKMEASARLELQSALEAEIRAKQ 756
Query: 45 LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR----E 100
Q+ L + A E S+ L++++ ++L+ P P+
Sbjct: 757 SLQEQLTQVQEAQRQAERRLQEA-EKQSQALQQEVAELREELQARGPGDARPSTSLIPLL 815
Query: 101 NFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNI 160
+F+ G E + L + A P
Sbjct: 816 SFWNTEKDSAKDPGNSGEGPRSGAEAELRPEGRRSLRMGSVFPRVPAATTTPAEGPPAKP 875
Query: 161 TT 162
+
Sbjct: 876 GS 877
>gi|254675191|ref|NP_001028514.1| serine/threonine-protein kinase MRCK gamma [Mus musculus]
gi|81174937|sp|Q80UW5|MRCKG_MOUSE RecName: Full=Serine/threonine-protein kinase MRCK gamma; AltName:
Full=CDC42-binding protein kinase gamma; AltName:
Full=DMPK-like gamma; AltName: Full=Myotonic dystrophy
kinase-related CDC42-binding kinase gamma; Short=MRCK
gamma; Short=Myotonic dystrophy protein kinase-like
gamma; AltName: Full=Myotonic dystrophy protein
kinase-like alpha
Length = 1551
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 47/182 (25%), Gaps = 21/182 (11%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSP---------------TLEKTYPETY-HRIRY 44
+Q A +A+ E+L + +P LE R +
Sbjct: 697 LQALATKMAEELESLRNVGTQTLPTRPLDHQWKARRLQKMEASARLELQSALEAEIRAKQ 756
Query: 45 LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR----E 100
Q+ L + A E S+ L++++ ++L+ P P+
Sbjct: 757 SLQEQLTQVQEAQRQAERRLQEA-EKQSQALQQEVAELREELQARGPGDARPSTSLIPLL 815
Query: 101 NFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNI 160
+F+ G E + L + A P
Sbjct: 816 SFWNTEKDSAKDPGNSGEGPRSGAEAELRPEGRRSLRMGSVFPRVPAATTTPAEGPPAKP 875
Query: 161 TT 162
+
Sbjct: 876 GS 877
>gi|23100278|ref|NP_693745.1| two-component sensor histidine kinase [Oceanobacillus iheyensis
HTE831]
gi|22778510|dbj|BAC14779.1| two-component sensor histidine kinase [Oceanobacillus iheyensis
HTE831]
Length = 350
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 35/108 (32%), Gaps = 4/108 (3%)
Query: 12 AEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELD 71
+ + +++ I D P ++ P+ I + + E +
Sbjct: 78 LKQIEKMLTGIIQGDRHPE-KEEIPKEMDAISNRMNQLQEKLRAQTEHAQRIATERANER 136
Query: 72 SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
+ L++ ++ E +L + D ++ F ++ E+
Sbjct: 137 EQSLQEVVVQERNRLAR---ELHDSVSQQLFAASMMMSAINEAETAED 181
>gi|328873686|gb|EGG22053.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 696
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 21/76 (27%), Gaps = 11/76 (14%)
Query: 21 HHIPDDSS--------PTLEKTYPETYHRI-RYLRQKALNIINHFVETGRNPDNIAKEL- 70
P ++ Y R R RQ+ N + ++ + +
Sbjct: 498 PQQPSPPLMSFNNNKQERNQQQDRPPYQRQDRQDRQERQGQFNQDRQERQDRNQERNQER 557
Query: 71 -DSEILEKKLIAENQQ 85
+++ + ++
Sbjct: 558 HQERNHQERNQGQQER 573
>gi|146312737|ref|YP_001177811.1| recombination and repair protein [Enterobacter sp. 638]
gi|145319613|gb|ABP61760.1| DNA replication and repair protein RecN [Enterobacter sp. 638]
gi|190341567|gb|ACE74860.1| RecN [Enterobacter sp. 638]
Length = 553
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPEQQKSLLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++ PQ + Q + +K L G+++ ++ +
Sbjct: 173 LAQHQQQSQERLARAELLEYQLKEFNEFQPQLGEFEQIDEEYKRLANSGHLISTSQQALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|190341583|gb|ACE74868.1| RecN [Escherichia vulneris]
Length = 553
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H S Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKSEQQKALLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K+L G +L + +
Sbjct: 173 LAQHQQQSQERTARAELLEYQLKELNEFNPQAGEFEQIDEEYKHLANSGQLLSTSQTALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 MLADGEDVNL 242
>gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253]
gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253]
Length = 1255
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 11/110 (10%), Positives = 33/110 (30%), Gaps = 2/110 (1%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+ + + A+ AQL N + + + + + E
Sbjct: 336 LDSLREEQAELKADQAQLANESAALQQDRQELEVDAQQLEQRAAELESDKAELEQQSEQL 395
Query: 61 RNPDNIAKELDSEILE--KKLIAENQQLEHLFPQTKDPAQRENFFKNLFR 108
+ + +E+ + +L E ++L+ F + + + +
Sbjct: 396 QESAGQLQAERAELEQRSAELQQEGKELQQAFSELQQDKKELQEKQAALE 445
>gi|296104286|ref|YP_003614432.1| DNA recombination and repair protein RecN [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|190341509|gb|ACE74831.1| RecN [Enterobacter cloacae]
gi|295058745|gb|ADF63483.1| DNA recombination and repair protein RecN [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 553
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLVKPEQQKSLLD--GYAGEYALTQLMAEHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + + +K L G++L + +
Sbjct: 173 LAQHQQQSQERAARAELLEYQLKELNEFNPQAGEFELIDEEYKRLANSGHLLSTSQNALT 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|291616894|ref|YP_003519636.1| FtsK [Pantoea ananatis LMG 20103]
gi|291151924|gb|ADD76508.1| FtsK [Pantoea ananatis LMG 20103]
Length = 1148
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 49/186 (26%), Gaps = 7/186 (3%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNII--NHFVET 59
Q A+ A+ +EA A P + + E+ +R Q + +
Sbjct: 452 QRMAEEKARLSEAPAAPQVSDQPHNPDWSAEEQDALQQAELRQAFQSEQQQRYGESWQQD 511
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEH----LFPQTKDPAQRENFFKNLFRIGNILGF 115
++ D+ + + + + Q+ E P F + G
Sbjct: 512 EQSEDDEQALEQASLARQFAEQQQQRYETEPANNAPVFNLDTSAAFDFSPMKD-LVDDGP 570
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
+ +A + Q Q A + + A + E
Sbjct: 571 VEPLFTIAATPETDEVAAKHEPWQQVQAAPTHAAAQRSMPTQNVASDTFAAPVEQPEPVE 630
Query: 176 KAIQKL 181
+A L
Sbjct: 631 EAKPSL 636
>gi|325114202|emb|CBZ49759.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1337
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/185 (9%), Positives = 63/185 (34%), Gaps = 12/185 (6%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++ + + L + L Q + P+ S + ++++ +K +E
Sbjct: 280 LEKRERDLCGRVQELEQRLAQTQPNGFSEAF---DTQELQQLQHEHRKLQQREQDLLEKE 336
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
R ++ ++ ++L E ++L + + ++ + + ++ +++
Sbjct: 337 RELQRQLEQHQKQL--EELHREVKELHRS--EAQTNGVDKHHEADAEQRAHVERLERKVK 392
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK---NHRRITSQEKA 177
HR + A ++ + + + ++ ++ S ++
Sbjct: 393 DVEKLHRE-AAERDAMRIRALEEENNL-LKRATAASASHPGGGRSPVLDAPFQLRSLQQL 450
Query: 178 IQKLY 182
+KL
Sbjct: 451 QEKLQ 455
>gi|297691552|ref|XP_002823147.1| PREDICTED: kinesin family member 21A isoform 4 [Pongo abelii]
Length = 1621
Score = 42.3 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 53/205 (25%), Gaps = 30/205 (14%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPE--------TYHRIRYL--RQKAL 50
++N K L + + + L + +Y + R +
Sbjct: 651 LENSQKRLQTLKKQYEEKLMMLQHKIRDTQL-ERDQVLQNLGSVESYSEEKAKKVRSEYE 709
Query: 51 NIINHFVETGRNPDNIAKELDSEIL-EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
+ + + KE + + + + ++L+ + K R K +
Sbjct: 710 KKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVR--LMKQMKEE 767
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
+ R ++ Q ++ ++R K
Sbjct: 768 QEKARLTESRRN-----REIAQLKK----DQRKRDVTALRRQVRPMSDKVAGKVTRKLSS 818
Query: 170 RITSQEKAIQKLYQTGSLYDSLEID 194
+ + TGS ++E D
Sbjct: 819 SDAAAQD-------TGSSAAAVETD 836
>gi|325119819|emb|CBZ55372.1| unnamed protein product [Neospora caninum Liverpool]
Length = 945
Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 36/134 (26%), Gaps = 6/134 (4%)
Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
+ + E R +E + ++K E +L + +D +
Sbjct: 816 MARLQEEQEAERQRVAEDEERKKKEAQRKAEEEAAKLREEEARKRDEEAAK--LAEQRES 873
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
+ ++ +L A AQ + Q +++ P +
Sbjct: 874 LRRAEQKDQQAKQ----KLTESAEKAQNQKKIQAVAQKEGKSQMSAPGIESAQGGVPLRA 929
Query: 170 RITSQEKAIQKLYQ 183
+ KL Q
Sbjct: 930 AALFTRQKRAKLNQ 943
>gi|321470448|gb|EFX81424.1| hypothetical protein DAPPUDRAFT_317679 [Daphnia pulex]
Length = 1734
Score = 42.3 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 55/187 (29%), Gaps = 18/187 (9%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++ + + A+ + LA+ + + R +K +
Sbjct: 540 LEQERRQQAELEKKLAKQREIEMEKEEQRR-------KMLEQREAARKEMERQRQLEWQK 592
Query: 61 RNPD---NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
+ ++ ++ L A +Q+L+ D + + + K
Sbjct: 593 QRLQELLQQRQKEQEKV--ALLRANHQRLQTELSVLDD--RVMELSSKIIETRTGVAETK 648
Query: 118 EEMVDITDHRLLSLAY----YAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITS 173
+ + R +A Q+ Q+Q+L + K+R + + N +
Sbjct: 649 NTIDGMRTTRDTQMAQLSTLKTQLREQNQRLLTVSQEKVRLEAKNRMNAATTPNANEAET 708
Query: 174 QEKAIQK 180
+ +
Sbjct: 709 IQNTTAR 715
>gi|291167764|ref|NP_001166936.1| kinesin-like protein KIF21A isoform 4 [Homo sapiens]
Length = 1621
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 52/205 (25%), Gaps = 30/205 (14%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPE--------TYHRIRYL--RQKAL 50
++N K L + + + L + +Y + R +
Sbjct: 651 LENSQKRLQTLKKQYEEKLMMLQHKIRDTQL-ERDQVLQNLGSVESYSEEKAKKVRSEYE 709
Query: 51 NIINHFVETGRNPDNIAKELDSEIL-EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
+ + + KE + + + + ++L+ + K R K +
Sbjct: 710 KKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVR--LMKQMKEE 767
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
+ R ++ Q ++ ++R K
Sbjct: 768 QEKARLTESRRN-----REIAQLKK----DQRKRDVTALRRQVRPMSDKVAGKVTRKLSS 818
Query: 170 RITSQEKAIQKLYQTGSLYDSLEID 194
+ TGS ++E D
Sbjct: 819 SDAPAQD-------TGSSAAAVETD 836
>gi|254416928|ref|ZP_05030676.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196176292|gb|EDX71308.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 283
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 17/72 (23%), Gaps = 3/72 (4%)
Query: 27 SSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQL 86
S L T E ++ + R + L + QQL
Sbjct: 212 PSGELIPTDNEQATV--AQQRAIAAQEQAILAQQRAIAAEERAQQEAQLAQLAQERAQQL 269
Query: 87 EHLFPQTK-DPA 97
+ DP
Sbjct: 270 AQRLRELGIDPD 281
>gi|332206545|ref|XP_003252354.1| PREDICTED: kinesin-like protein KIF21A isoform 2 [Nomascus
leucogenys]
Length = 1621
Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 52/205 (25%), Gaps = 30/205 (14%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPE--------TYHRIRYL--RQKAL 50
++N K L + + + L + +Y + R +
Sbjct: 651 LENSQKRLQTLKKQYEEKLMMLQHKIRDTQL-ERDQVLQNLGSVESYSEEKAKKVRSEYE 709
Query: 51 NIINHFVETGRNPDNIAKELDSEIL-EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
+ + + KE + + + + ++L+ + K R K +
Sbjct: 710 KKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVR--LMKQMKEE 767
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
+ R ++ Q ++ ++R K
Sbjct: 768 QEKARLTESRRN-----REIAQLKK----DQRKRDVTALRRQVRPMSDKVAGKVTRKLSS 818
Query: 170 RITSQEKAIQKLYQTGSLYDSLEID 194
+ TGS ++E D
Sbjct: 819 SDAPAQD-------TGSSAAAVETD 836
>gi|260598994|ref|YP_003211565.1| recombination and repair protein [Cronobacter turicensis z3032]
gi|260218171|emb|CBA33014.1| DNA repair protein recN [Cronobacter turicensis z3032]
Length = 573
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 9/148 (6%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 135 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGDLMAQMAQSYRQWHQSCRD 192
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 193 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 252
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAY 149
+ D A + Q
Sbjct: 253 LLADAE------DANLQSQLYSARNLVT 274
>gi|83582518|emb|CAJ45483.1| kinesin-like protein KIF21A variant [Homo sapiens]
Length = 1621
Score = 41.9 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 52/205 (25%), Gaps = 30/205 (14%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPE--------TYHRIRYL--RQKAL 50
++N K L + + + L + +Y + R +
Sbjct: 651 LENSQKRLQTLKKQYEEKLMMLQHKIRDTQL-ERDQVLQNLGSVESYSEEKAKKVRSEYE 709
Query: 51 NIINHFVETGRNPDNIAKELDSEIL-EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
+ + + KE + + + + ++L+ + K R K +
Sbjct: 710 KKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVR--LMKQMKEE 767
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
+ R ++ Q ++ ++R K
Sbjct: 768 QEKARLTESRRN-----REIAQLKKG----QRKRDVTALRRQVRPMSDKVAGKVTRKLSS 818
Query: 170 RITSQEKAIQKLYQTGSLYDSLEID 194
+ TGS ++E D
Sbjct: 819 SDAPAQD-------TGSSAAAVETD 836
>gi|29350088|ref|NP_813591.1| DNA mismatch repair protein MutS [Bacteroides thetaiotaomicron
VPI-5482]
gi|29342000|gb|AAO79785.1| DNA mismatch repair protein MutS [Bacteroides thetaiotaomicron
VPI-5482]
Length = 833
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 8/130 (6%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R + + +E + E E+ L N ++E+ K AQ
Sbjct: 553 IRQREKHMEDTIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIK-EAQ 611
Query: 99 RENFFKNL-FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
E L + N E M + A+ + ++ E +K
Sbjct: 612 AEKEKTRLVRQELNDFRTSLETMTSKEQEEKI-----ARKMEKLKEKQERKKNKKNEPKT 666
Query: 158 VNITTNKAKN 167
T
Sbjct: 667 AASQTAATPK 676
>gi|190341695|gb|ACE74924.1| RecN [Cronobacter turicensis]
gi|190341697|gb|ACE74925.1| RecN [Cronobacter turicensis]
gi|190341699|gb|ACE74926.1| RecN [Cronobacter turicensis]
Length = 553
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|72000923|ref|NP_001024204.1| TiTiN family member (ttn-1) [Caenorhabditis elegans]
Length = 18562
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 47/171 (27%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7091 DKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7150
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7151 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLKKENDDKLKQEADAKL---- 7197
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K K + +++A KL +
Sbjct: 7198 -KKEKHDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQK 7247
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7075 DKLKQEADAKLKKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7134
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7135 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKL---- 7181
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K +H K + +++A KL +
Sbjct: 7182 -KKENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAKLQK 7231
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 48/177 (27%), Gaps = 18/177 (10%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNI---INHFVETGRNPDNIAKE 69
+ L Q + + ++ L++ +++ L E A
Sbjct: 7043 DKLKQEADAKLKKENDDKLKQE---AAAKLKKENDDKLKQEADAKLKKENDDKLKQEADA 7099
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
+ + KL E ++ + + + +++ D +L
Sbjct: 7100 KLQKENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQ 7150
Query: 130 SLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K +++ KL Q
Sbjct: 7151 KENDDKLKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7207
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 50/185 (27%), Gaps = 18/185 (9%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNPDNIAKEL 70
+ L Q + + ++ L++ + K + ++ A
Sbjct: 7171 DKLKQEADAKLKKENDDKLKQE--ADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAK 7228
Query: 71 DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI---------GNILGFQKEEMV 121
+ + KL E + D ++E K + + +++
Sbjct: 7229 LQKENDDKLKQEADAKLQK--EKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLK 7286
Query: 122 DITDHRLLSLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
D +L + QK +D + ++ K Q++
Sbjct: 7287 QEADAKLKKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKD 7346
Query: 179 QKLYQ 183
KL Q
Sbjct: 7347 DKLKQ 7351
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 12/174 (6%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7011 DKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLK 7070
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7071 KENDDKLKQEADAKLKK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQKEN 7121
Query: 133 YYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K Q++ KL Q
Sbjct: 7122 DDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQ 7175
>gi|72000921|ref|NP_001024203.1| TiTiN family member (ttn-1) [Caenorhabditis elegans]
gi|24620454|gb|AAN61518.1| 2MDa_2 protein [Caenorhabditis elegans]
Length = 18519
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 47/171 (27%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7091 DKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7150
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7151 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLKKENDDKLKQEADAKL---- 7197
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K K + +++A KL +
Sbjct: 7198 -KKEKHDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQK 7247
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7075 DKLKQEADAKLKKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7134
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7135 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKL---- 7181
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K +H K + +++A KL +
Sbjct: 7182 -KKENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAKLQK 7231
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 48/177 (27%), Gaps = 18/177 (10%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNI---INHFVETGRNPDNIAKE 69
+ L Q + + ++ L++ +++ L E A
Sbjct: 7043 DKLKQEADAKLKKENDDKLKQE---AAAKLKKENDDKLKQEADAKLKKENDDKLKQEADA 7099
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
+ + KL E ++ + + + +++ D +L
Sbjct: 7100 KLQKENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQ 7150
Query: 130 SLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K +++ KL Q
Sbjct: 7151 KENDDKLKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7207
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 50/185 (27%), Gaps = 18/185 (9%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNPDNIAKEL 70
+ L Q + + ++ L++ + K + ++ A
Sbjct: 7171 DKLKQEADAKLKKENDDKLKQE--ADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAK 7228
Query: 71 DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI---------GNILGFQKEEMV 121
+ + KL E + D ++E K + + +++
Sbjct: 7229 LQKENDDKLKQEADAKLQK--EKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLK 7286
Query: 122 DITDHRLLSLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
D +L + QK +D + ++ K Q++
Sbjct: 7287 QEADAKLKKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKD 7346
Query: 179 QKLYQ 183
KL Q
Sbjct: 7347 DKLKQ 7351
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 12/174 (6%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7011 DKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLK 7070
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7071 KENDDKLKQEADAKLKK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQKEN 7121
Query: 133 YYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K Q++ KL Q
Sbjct: 7122 DDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQ 7175
>gi|72000919|ref|NP_001024202.1| TiTiN family member (ttn-1) [Caenorhabditis elegans]
gi|24620453|gb|AAN61517.1| 2MDa_1 protein [Caenorhabditis elegans]
Length = 18534
Score = 41.6 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 47/171 (27%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7091 DKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7150
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7151 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLKKENDDKLKQEADAKL---- 7197
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K K + +++A KL +
Sbjct: 7198 -KKEKHDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQK 7247
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7075 DKLKQEADAKLKKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7134
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7135 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKL---- 7181
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K +H K + +++A KL +
Sbjct: 7182 -KKENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAKLQK 7231
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 48/177 (27%), Gaps = 18/177 (10%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNI---INHFVETGRNPDNIAKE 69
+ L Q + + ++ L++ +++ L E A
Sbjct: 7043 DKLKQEADAKLKKENDDKLKQE---AAAKLKKENDDKLKQEADAKLKKENDDKLKQEADA 7099
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
+ + KL E ++ + + + +++ D +L
Sbjct: 7100 KLQKENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQ 7150
Query: 130 SLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K +++ KL Q
Sbjct: 7151 KENDDKLKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7207
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 50/185 (27%), Gaps = 18/185 (9%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNPDNIAKEL 70
+ L Q + + ++ L++ + K + ++ A
Sbjct: 7171 DKLKQEADAKLKKENDDKLKQE--ADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAK 7228
Query: 71 DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI---------GNILGFQKEEMV 121
+ + KL E + D ++E K + + +++
Sbjct: 7229 LQKENDDKLKQEADAKLQK--EKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLK 7286
Query: 122 DITDHRLLSLAYYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
D +L + QK +D + ++ K Q++
Sbjct: 7287 QEADAKLKKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKD 7346
Query: 179 QKLYQ 183
KL Q
Sbjct: 7347 DKLKQ 7351
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 12/174 (6%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7011 DKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLK 7070
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7071 KENDDKLKQEADAKLKK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQKEN 7121
Query: 133 YYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K Q++ KL Q
Sbjct: 7122 DDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQ 7175
>gi|50539754|ref|NP_001002343.1| guanylate binding protein 1 [Danio rerio]
gi|49900390|gb|AAH75920.1| Zgc:92185 [Danio rerio]
Length = 621
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 12/146 (8%), Positives = 41/146 (28%), Gaps = 17/146 (11%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDD---SSPTLEKTYPETYHRIRYLRQKALNIINHFV 57
+Q + + A + + I + ++ + + + ++ +++
Sbjct: 488 IQEEKERNALMQQKCEEEQEKRIESERMMAAEKVRQDDQIKQMQEKFEKER-----EQMQ 542
Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNIL-GFQ 116
+ + + E+L K L K + + + G
Sbjct: 543 QETEKAIDSKLKEQEEMLNKGFKERADLLSEEINDLKKEKKGF-----MEEYIMPIVGAA 597
Query: 117 KEEMVDITDHRLLSLAYYAQIGLQSQ 142
+ + I D+R + + +
Sbjct: 598 AQILPTILDYR---VMMKGMKYGKVK 620
>gi|298483381|ref|ZP_07001559.1| MutS2 family protein [Bacteroides sp. D22]
gi|298270510|gb|EFI12093.1| MutS2 family protein [Bacteroides sp. D22]
Length = 833
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + AQ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AQKMKKLKEKQERKKNKKNEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|190341605|gb|ACE74879.1| RecN [Cronobacter genomosp. 1]
Length = 553
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|237722537|ref|ZP_04553018.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_2_4]
gi|229448347|gb|EEO54138.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_2_4]
Length = 833
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + AQ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AQKMKKLKEKQERKKNKKNEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|294645981|ref|ZP_06723647.1| MutS2 family protein [Bacteroides ovatus SD CC 2a]
gi|294809358|ref|ZP_06768068.1| MutS2 family protein [Bacteroides xylanisolvens SD CC 1b]
gi|292638664|gb|EFF57016.1| MutS2 family protein [Bacteroides ovatus SD CC 2a]
gi|294443450|gb|EFG12207.1| MutS2 family protein [Bacteroides xylanisolvens SD CC 1b]
gi|295087237|emb|CBK68760.1| Mismatch repair ATPase (MutS family) [Bacteroides xylanisolvens
XB1A]
Length = 833
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + AQ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AQKMKKLKEKQERKKNKKNEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|237713050|ref|ZP_04543531.1| DNA mismatch repair protein MutS [Bacteroides sp. D1]
gi|262407354|ref|ZP_06083902.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_22]
gi|229446867|gb|EEO52658.1| DNA mismatch repair protein MutS [Bacteroides sp. D1]
gi|262354162|gb|EEZ03254.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_22]
Length = 833
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + AQ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AQKMKKLKEKQERKKNKKNEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|190341703|gb|ACE74928.1| RecN [Cronobacter turicensis]
Length = 553
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341701|gb|ACE74927.1| RecN [Cronobacter turicensis]
Length = 553
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|289548575|ref|YP_003473563.1| MutS2 family protein [Thermocrinis albus DSM 14484]
gi|289182192|gb|ADC89436.1| MutS2 family protein [Thermocrinis albus DSM 14484]
Length = 751
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 8/85 (9%), Positives = 21/85 (24%), Gaps = 4/85 (4%)
Query: 34 TYPETYHRIRY----LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHL 89
E Y R + + + + EI K + + L+ L
Sbjct: 517 ENLEEYVREYEKRLKELEDTKMELERLRAQQEVLLSQLEREKEEIQRKAMQEAMEYLKKL 576
Query: 90 FPQTKDPAQRENFFKNLFRIGNILG 114
+ ++ + + +
Sbjct: 577 EAEYRELIKTAKERQRVREFLKEKS 601
>gi|265762715|ref|ZP_06091283.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_16]
gi|263255323|gb|EEZ26669.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_16]
Length = 832
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 552 IRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQ 610
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
E L R L +E + ++T A+ + ++ K ++
Sbjct: 611 AEKEKTRLVR--QELADFRESIDNLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNGTKE 666
Query: 159 NITTNKAKNHRRITS 173
+ IT
Sbjct: 667 QPAVQQTPKATPITE 681
>gi|301162286|emb|CBW21831.1| putative DNA mismatch repair MutS protein [Bacteroides fragilis
638R]
Length = 832
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 552 IRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQ 610
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
E L R L +E + ++T A+ + ++ K ++
Sbjct: 611 AEKEKTRLVR--QELADFRESIDNLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNGTKE 666
Query: 159 NITTNKAKNHRRITS 173
+ IT
Sbjct: 667 QPAVQQTPKATPITE 681
>gi|190341665|gb|ACE74909.1| RecN [Cronobacter sakazakii]
gi|190341669|gb|ACE74911.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 9/151 (5%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKI 152
+ D A + Q +
Sbjct: 233 LLADAE------DANLQSQLYSARNLVTELV 257
>gi|253563410|ref|ZP_04840867.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_2_5]
gi|251947186|gb|EES87468.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_2_5]
Length = 832
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 552 IRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQ 610
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
E L R L +E + ++T A+ + ++ K ++
Sbjct: 611 AEKEKTRLVR--QELADFRESIDNLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNGTKE 666
Query: 159 NITTNKAKNHRRITS 173
+ IT
Sbjct: 667 QPAVQQTPKATPITE 681
>gi|260171222|ref|ZP_05757634.1| DNA mismatch repair protein MutS [Bacteroides sp. D2]
gi|315919537|ref|ZP_07915777.1| DNA mismatch repair protein MutS [Bacteroides sp. D2]
gi|313693412|gb|EFS30247.1| DNA mismatch repair protein MutS [Bacteroides sp. D2]
Length = 833
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + A+ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AKKMEKLKEKQERKKNKKSEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|190341649|gb|ACE74901.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341627|gb|ACE74890.1| RecN [Cronobacter malonaticus]
Length = 553
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|53712559|ref|YP_098551.1| DNA mismatch repair protein MutS [Bacteroides fragilis YCH46]
gi|52215424|dbj|BAD48017.1| DNA mismatch repair protein MutS [Bacteroides fragilis YCH46]
Length = 832
Score = 41.2 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 552 IRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQ 610
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
E L R L +E + ++T A+ + ++ K ++
Sbjct: 611 AEKEKTRLVR--QELADFRESIDNLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNGTKE 666
Query: 159 NITTNKAKNHRRITS 173
+ IT
Sbjct: 667 QPAVQQTPKATPITE 681
>gi|293370963|ref|ZP_06617505.1| MutS2 family protein [Bacteroides ovatus SD CMC 3f]
gi|292633893|gb|EFF52440.1| MutS2 family protein [Bacteroides ovatus SD CMC 3f]
Length = 833
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + A+ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AKKMEKLKEKQERKKNKKSEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|190341691|gb|ACE74922.1| RecN [Cronobacter turicensis]
Length = 553
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGDLMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|293341590|ref|XP_002724987.1| PREDICTED: CDNA sequence BC057170-like [Rattus norvegicus]
Length = 598
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
E +++A + + E + ++ L ++L Q +
Sbjct: 476 EKAIAEERTQREAAEKEQELLRQKQREQQQLMEAQEKSNKENLEQLREKLVQERKQLIEE 535
Query: 97 -----AQRENFFKNLFRIGNILGFQKEEMVDITDH 126
++ K + + + K+ I DH
Sbjct: 536 HNMMLEKQLKDQKAYLEVSYHIKYMKQNSGSIVDH 570
>gi|190341657|gb|ACE74905.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341651|gb|ACE74902.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341641|gb|ACE74897.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341607|gb|ACE74880.1| RecN [Cronobacter malonaticus]
gi|190341609|gb|ACE74881.1| RecN [Cronobacter malonaticus]
gi|190341613|gb|ACE74883.1| RecN [Cronobacter malonaticus]
gi|190341615|gb|ACE74884.1| RecN [Cronobacter malonaticus]
gi|190341617|gb|ACE74885.1| RecN [Cronobacter malonaticus]
gi|190341619|gb|ACE74886.1| RecN [Cronobacter malonaticus]
gi|190341623|gb|ACE74888.1| RecN [Cronobacter malonaticus]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341597|gb|ACE74875.1| RecN [Cronobacter dublinensis]
gi|190341599|gb|ACE74876.1| RecN [Cronobacter dublinensis]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGSLMTQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERVARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341585|gb|ACE74869.1| RecN [Leclercia adecarboxylata ATCC 23216]
gi|190341587|gb|ACE74870.1| RecN [Leclercia adecarboxylata]
Length = 553
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H Y L Q + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLIKPDQQKSLLD--GYAGESDLMQLMAAHYRQWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLAYQLKELNEFSPQPGEFEQIDEEYKRLANSGQLLSTGQQALT 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEEVNL 242
>gi|307129652|ref|YP_003881668.1| recombination and repair protein [Dickeya dadantii 3937]
gi|306527181|gb|ADM97111.1| recombination and repair protein [Dickeya dadantii 3937]
Length = 553
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 6/138 (4%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q L H + Y L I + ++ R
Sbjct: 115 SQLRELGQHLIQLHGQHAHQLLLKPEHQRHLLD--AYADESQLLSAMRQIWQQWHQSCRE 172
Query: 63 PDNIAKEL-DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + E + L + ++L PQ+ + Q + +K L G ++ ++ +
Sbjct: 173 LAQLQQATIEREARRELLQYQLKELNEFAPQSGEYEQIDVEYKRLANSGQLMSLSQQTLQ 232
Query: 122 DIT---DHRLLSLAYYAQ 136
++ D LLS+ + A+
Sbjct: 233 ILSESEDQNLLSMLHSAR 250
>gi|190341655|gb|ACE74904.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341611|gb|ACE74882.1| RecN [Cronobacter malonaticus]
gi|190341621|gb|ACE74887.1| RecN [Cronobacter malonaticus]
gi|190341625|gb|ACE74889.1| RecN [Cronobacter malonaticus]
gi|190341639|gb|ACE74896.1| RecN [Cronobacter sakazakii]
gi|190341643|gb|ACE74898.1| RecN [Cronobacter sakazakii]
gi|190341645|gb|ACE74899.1| RecN [Cronobacter sakazakii]
gi|190341647|gb|ACE74900.1| RecN [Cronobacter sakazakii]
gi|190341653|gb|ACE74903.1| RecN [Cronobacter sakazakii]
gi|190341659|gb|ACE74906.1| RecN [Cronobacter sakazakii]
gi|190341661|gb|ACE74907.1| RecN [Cronobacter sakazakii]
gi|190341663|gb|ACE74908.1| RecN [Cronobacter sakazakii]
gi|190341667|gb|ACE74910.1| RecN [Cronobacter sakazakii]
gi|190341671|gb|ACE74912.1| RecN [Cronobacter sakazakii]
gi|190341673|gb|ACE74913.1| RecN [Cronobacter sakazakii]
gi|190341675|gb|ACE74914.1| RecN [Cronobacter sakazakii]
gi|190341677|gb|ACE74915.1| RecN [Cronobacter sakazakii]
gi|190341679|gb|ACE74916.1| RecN [Cronobacter sakazakii]
gi|190341681|gb|ACE74917.1| RecN [Cronobacter sakazakii]
gi|190341683|gb|ACE74918.1| RecN [Cronobacter sakazakii]
gi|190341685|gb|ACE74919.1| RecN [Cronobacter sakazakii]
gi|190341687|gb|ACE74920.1| RecN [Cronobacter sakazakii]
gi|190341689|gb|ACE74921.1| RecN [Cronobacter sakazakii]
Length = 553
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|190341563|gb|ACE74858.1| RecN [Enterobacter turicensis]
Length = 553
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPDHQKALLD--GYAGEHTLTQQMAAAYREWHQSCRA 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 173 LAQHQQLSQERAARAELLAYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITD 125
+ D
Sbjct: 233 ALAD 236
>gi|326680136|ref|XP_684554.5| PREDICTED: a-kinase anchor protein 13 [Danio rerio]
Length = 2550
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 24/131 (18%)
Query: 1 MQNQAKI-LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVET 59
++ + + L + + +A L H R++ T
Sbjct: 2296 IEQEKQRSLEKQRQEVASLQKQQ---------------AAHAEERRRREKQWETREKELT 2340
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEHLFPQT-------KDPAQR-ENFFKNLFRIGN 111
R ++E +++ ++L E Q+L+ + +D +R E + + R +
Sbjct: 2341 QREMQIQSQEEEAQRRARQLEEEKQELQSKKEEYQRDLARLRDSQKRLEREREQVQREAD 2400
Query: 112 ILGFQKEEMVD 122
L +E +
Sbjct: 2401 ELKLTEEVTKN 2411
>gi|190341601|gb|ACE74877.1| RecN [Cronobacter dublinensis]
Length = 553
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGSLMTQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERVARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
corporis]
gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
corporis]
Length = 1217
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 8/135 (5%)
Query: 37 ETYHRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKD 95
YH R R + + E R + + + + LE++ E +Q+ + K+
Sbjct: 829 AQYHVARARRVDEEEKQLRKKQEEEREAFRVRQMEEQKKLEERRRQEAEQMLIKRQEYKE 888
Query: 96 PAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHK 155
+ F L K + ITD + + +
Sbjct: 889 KTKNAILFTELPNEMKPKSRGKGKKDYITDS-------DGSDAENEKPKEPKERKRSEKR 941
Query: 156 PFVNITTNKAKNHRR 170
K + ++
Sbjct: 942 KEGRKGGTKRRKEKK 956
>gi|312131267|ref|YP_003998607.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
17132]
gi|311907813|gb|ADQ18254.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
17132]
Length = 1080
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 70/203 (34%), Gaps = 24/203 (11%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG- 60
+ Q+ L Q E + +++N + S LE+ + L +K+L+ + F +
Sbjct: 577 EQQSPQLQQKMEMIQKMLNELMESKDSKVLEE---LKKMMEKSLDEKSLDQLEKFNKNQR 633
Query: 61 -------------RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLF 107
+ K ++ K+L E ++L +D + F+++
Sbjct: 634 NLDKELDRTLKLFQELQRKQKIEETSNELKELAEEQEKLSEADANPQDQEKINQKFEDIK 693
Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
+ + + E+ D + + + A ++ + + +
Sbjct: 694 KKLEDIENRSNELNKSFDP-----MDD--KQSEISEDQKQAKKELSQQNKDAASKAQKNA 746
Query: 168 HRRITSQEKAIQKLYQTGSLYDS 190
+++ + +++ Q+ + +
Sbjct: 747 AKKMKQMAEEMEQQMQSAEMQQA 769
>gi|148257040|ref|YP_001241625.1| hypothetical protein BBta_5771 [Bradyrhizobium sp. BTAi1]
gi|146409213|gb|ABQ37719.1| hypothetical protein BBta_5771 [Bradyrhizobium sp. BTAi1]
Length = 384
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 16/194 (8%)
Query: 9 AQSAEALAQLINHHIPDDS--SPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNI 66
A + + + P+ + RI Q A+ + + +
Sbjct: 189 ASFLSQFPEFAGMPAEQVPAVLERMSRDDPDRFGRI----QAAVAMSDQLLAQQAQEQRR 244
Query: 67 AKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDH 126
E+ + + ++ +LE + + + A R+ + G E+ + +
Sbjct: 245 QAEVAQQGFQSFAQEQDSRLESMLAR-EPKAVRQAVAAEIMAAARENGISAAELNRLFET 303
Query: 127 RLLS-------LAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
L + Y A + +DA K P V + R +
Sbjct: 304 EPLMRHATFQRMMYDAARYRLMMRAKDDAVTKA--VPPVMRPGVATSSRERGQDLRELNA 361
Query: 180 KLYQTGSLYDSLEI 193
+L +G L D++ +
Sbjct: 362 RLTSSGDLKDAVAL 375
>gi|190341565|gb|ACE74859.1| RecN [Enterobacter turicensis]
Length = 540
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R
Sbjct: 102 SQLRELGQLLIQIHGQHAHQLLLKPDHQKALLD--GYAGEHTLTQQMAAAYREWHQSCRA 159
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 160 LAQHQQLSQERAARAELLAYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTSQQALN 219
Query: 122 DITD 125
+ D
Sbjct: 220 ALAD 223
>gi|153807817|ref|ZP_01960485.1| hypothetical protein BACCAC_02100 [Bacteroides caccae ATCC 43185]
gi|149129426|gb|EDM20640.1| hypothetical protein BACCAC_02100 [Bacteroides caccae ATCC 43185]
Length = 834
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 8/130 (6%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 554 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIK-EAQ 612
Query: 99 RENFFKNL-FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
E + + + + A+ + ++ E +K +
Sbjct: 613 AEKEKTRMARQELTDFRTSLDALASKEQEE-----KMARKMEKLKEKQERKKNKKNEQKA 667
Query: 158 VNITTNKAKN 167
+ +T
Sbjct: 668 ASSSTTATPK 677
>gi|290476147|ref|YP_003469047.1| nucleoside triphosphate hydrolase domain-containing protein
[Xenorhabdus bovienii SS-2004]
gi|289175480|emb|CBJ82283.1| protein used in recombination and DNA repair with nucleoside
triphosphate hydrolase domain [Xenorhabdus bovienii
SS-2004]
Length = 557
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 39 YHRIRYLRQKALNIINHFVETGRNPDN-IAKELDSEILEKKLIAENQQLEHLFPQTKDPA 97
Y + + + ++ + + L+ ++ L ++L L PQ +
Sbjct: 153 YAGEFERQHEMKQAYQQWRQSCQALARFQQQALERRSRQQLLEYHLKELNELAPQVGEYQ 212
Query: 98 QRENFFKNLFRIGNILGFQKEEMVDITDH---RLLSLAYYAQ 136
++++ +K L G L + + + D+ ++SL YA+
Sbjct: 213 EQDSEYKRLANCGQFLSVSQNVLQILNDNDEQNIVSLLNYAR 254
>gi|154318880|ref|XP_001558758.1| hypothetical protein BC1G_02829 [Botryotinia fuckeliana B05.10]
gi|150857959|gb|EDN33151.1| hypothetical protein BC1G_02829 [Botryotinia fuckeliana B05.10]
Length = 2017
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 16/170 (9%), Positives = 47/170 (27%), Gaps = 8/170 (4%)
Query: 11 SAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKEL 70
L ++ S + P T R R + +++E
Sbjct: 1387 QRPTLQSNLSQQSQTASP----ISDPITLASQRSARVAEEAHRERQKALEHEVERMSQEQ 1442
Query: 71 DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLS 130
I L + ++ + ++ A RE + + ++++ +
Sbjct: 1443 QQAIKRLALQDQARREQQAI---REQAVREQAIREREQALREQTHREQQQQAYQRREQIR 1499
Query: 131 LAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
A Q ++ R+ ++ + R +++ ++
Sbjct: 1500 EM-EAIERQQQRERESKQEQLERNLKRKQERDHEQREQREQQDRKEKREQ 1548
>gi|299470937|emb|CBN79921.1| TTK-like [Ectocarpus siliculosus]
Length = 967
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 5/72 (6%), Positives = 20/72 (27%)
Query: 34 TYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQT 93
+ + R +++A + + + +++ E + E +
Sbjct: 34 ADQKRAEQERAEQERAEQERSEQERAEQERAEQERAEQERAEQERAEQERAEQERAEQER 93
Query: 94 KDPAQRENFFKN 105
+ + E
Sbjct: 94 AEQERAEQERAE 105
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 22/80 (27%)
Query: 6 KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDN 65
LA A + + E+ E + R +++A +
Sbjct: 31 SKLADQKRAEQERAEQERAEQERSEQERAEQERAEQERAEQERAEQERAEQERAEQERAE 90
Query: 66 IAKELDSEILEKKLIAENQQ 85
+ +++ E ++
Sbjct: 91 QERAEQERAEQERAEQELER 110
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 4/62 (6%), Positives = 18/62 (29%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
+ R ++++ + + +++ E + E + + + E
Sbjct: 46 QERAEQERSEQERAEQERAEQERAEQERAEQERAEQERAEQERAEQERAEQERAEQERAE 105
Query: 101 NF 102
Sbjct: 106 QE 107
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 6/70 (8%), Positives = 20/70 (28%)
Query: 36 PETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKD 95
P TY + + + + + + + +++ E + E + +
Sbjct: 16 PGTYESLEAWKTRLQSKLADQKRAEQERAEQERAEQERSEQERAEQERAEQERAEQERAE 75
Query: 96 PAQRENFFKN 105
+ E
Sbjct: 76 QERAEQERAE 85
>gi|190341575|gb|ACE74864.1| RecN [Enterobacter sp. E440]
Length = 553
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L QK + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPDHQKTLLD--GYAGEHALTQKMAATYREWHQSCRA 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 173 LAQHQQLSQERAARAELLAYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITD 125
+ D
Sbjct: 233 ALAD 236
>gi|60680741|ref|YP_210885.1| putative DNA mismatch repair MutS protein [Bacteroides fragilis
NCTC 9343]
gi|60492175|emb|CAH06938.1| putative DNA mismatch repair MutS protein [Bacteroides fragilis
NCTC 9343]
Length = 832
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K AQ
Sbjct: 552 IRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQ 610
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
E L R L +E + ++T A+ + ++ K ++
Sbjct: 611 AEKEKTRLVR--QELADFRESIDNLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNGTKE 666
Query: 159 NITTNKAKNHRRITS 173
T + IT
Sbjct: 667 QPTVQQTPKATPITE 681
>gi|196011501|ref|XP_002115614.1| predicted protein [Trichoplax adhaerens]
gi|190581902|gb|EDV21977.1| predicted protein [Trichoplax adhaerens]
Length = 767
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 26/85 (30%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q A Q E +A + I L + +H+ + +
Sbjct: 567 LQEAAISQQQQVEQVAIQQSAIIQQLRDQVLIQQDAIAHHQQQGEIALQTAAALKQQQEL 626
Query: 61 RNPDNIAKELDSEILEKKLIAENQQ 85
+ +E + +++ + E +
Sbjct: 627 QELILQQREQQEQSIQQAIATEKHK 651
>gi|190341603|gb|ACE74878.1| RecN [Cronobacter genomosp. 1]
Length = 553
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 9/148 (6%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPHAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAY 149
+ D A + Q
Sbjct: 233 LLADAE------DANLQSQLYSARNLVT 254
>gi|255008018|ref|ZP_05280144.1| DNA mismatch repair protein MutS [Bacteroides fragilis 3_1_12]
gi|313145734|ref|ZP_07807927.1| DNA mismatch repair protein MutS [Bacteroides fragilis 3_1_12]
gi|313134501|gb|EFR51861.1| DNA mismatch repair protein MutS [Bacteroides fragilis 3_1_12]
Length = 832
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 5/127 (3%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
+ ++ + +E + E E+ L N ++E+ K AQ E
Sbjct: 554 QREKQMEETIARYQSEMEELQKSRKEIIRQAKEEAERLLQESNARIENTIRTIK-EAQAE 612
Query: 101 NFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNI 160
L R L +E M +T A+ + ++ K ++ P
Sbjct: 613 KEKTRLVR--QELAEFRESMDSLTSKEQEDKI--ARKMEKLKEKQNRKKEKKQNVPKEQQ 668
Query: 161 TTNKAKN 167
+
Sbjct: 669 AAQQTPQ 675
>gi|253571551|ref|ZP_04848957.1| DNA mismatch repair protein MutS [Bacteroides sp. 1_1_6]
gi|251838759|gb|EES66844.1| DNA mismatch repair protein MutS [Bacteroides sp. 1_1_6]
Length = 712
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 8/130 (6%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R + + +E + E E+ L N ++E+ K AQ
Sbjct: 553 IRQREKHMEDTIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIK-EAQ 611
Query: 99 RENFFKNL-FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
E L + N E M + A+ + ++ E +K
Sbjct: 612 AEKEKTRLVRQELNDFRTSLETMTSKEQEEKI-----ARKMEKLKEKQERKKNKKNEPKT 666
Query: 158 VNITTNKAKN 167
T
Sbjct: 667 AASQTAATPK 676
>gi|156846258|ref|XP_001646017.1| hypothetical protein Kpol_1031p66 [Vanderwaltozyma polyspora DSM
70294]
gi|156116688|gb|EDO18159.1| hypothetical protein Kpol_1031p66 [Vanderwaltozyma polyspora DSM
70294]
Length = 1389
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 52 IINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGN 111
+ ++ ++E+++ + + L + D ++ K + +G
Sbjct: 698 QAEELQRKQQQFIEEQQKQQQALVEQQMRQQQELLRKKY----DEELKKLPKKYIRTVGT 753
Query: 112 IL 113
Sbjct: 754 NY 755
>gi|190341629|gb|ACE74891.1| RecN [Cronobacter muytjensii]
gi|190341631|gb|ACE74892.1| RecN [Cronobacter muytjensii]
gi|190341633|gb|ACE74893.1| RecN [Cronobacter muytjensii]
gi|190341635|gb|ACE74894.1| RecN [Cronobacter muytjensii]
gi|190341637|gb|ACE74895.1| RecN [Cronobacter muytjensii]
Length = 553
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGESTLMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|283786235|ref|YP_003366100.1| DNA repair protein [Citrobacter rodentium ICC168]
gi|282949689|emb|CBG89308.1| DNA repair protein [Citrobacter rodentium ICC168]
Length = 553
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLIKPEHQKSLLD--GYANEVLLVQEMASRYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|190341693|gb|ACE74923.1| RecN [Cronobacter turicensis]
Length = 553
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPEHQKHLLD--GYAGEGELMAQMAQSYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSQERAARAELLHYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQQALN 232
Query: 122 DITDHR 127
+ D
Sbjct: 233 LLADAE 238
>gi|320657044|gb|EFX24867.1| recombination and repair protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 553
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|331648358|ref|ZP_08349446.1| DNA repair protein RecN [Escherichia coli M605]
gi|330912377|gb|EGH40887.1| DNA repair protein RecN [Escherichia coli AA86]
gi|331042105|gb|EGI14247.1| DNA repair protein RecN [Escherichia coli M605]
Length = 553
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|296804276|ref|XP_002842990.1| SlaB [Arthroderma otae CBS 113480]
gi|238845592|gb|EEQ35254.1| SlaB [Arthroderma otae CBS 113480]
Length = 1055
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 15/54 (27%), Gaps = 2/54 (3%)
Query: 37 ETYHRIRYLRQKALNIINHF--VETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
R + + + + + +++L AE Q+L
Sbjct: 316 TEAKRQQEEYEAEQRRLQSQWEEQQRNQMLAQQQAQREFEEQQRLQAEQQRLAQ 369
>gi|189203901|ref|XP_001938286.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985385|gb|EDU50873.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1651
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/145 (12%), Positives = 37/145 (25%), Gaps = 10/145 (6%)
Query: 53 INHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNI 112
I E A + E++ A + P+ A N ++
Sbjct: 176 IKQQQEAAIKQQQEAALKQQQEEEQRAAANAASVPERSPRVPSEASSGNNRVSMRTPALH 235
Query: 113 LGFQKEEMVDITDHRLLSLAYYAQ--IGLQSQKLSEDAYHKIRHKPFVNIT------TNK 164
+ +D + G ++ + + +P V N
Sbjct: 236 --LSPQMSELESDDGYVYDLNEPWDPNGARAVAVQPIQAGTVHKRPPVPSGYDAFPHNNA 293
Query: 165 AKNHRRITSQEKAIQKLYQTGSLYD 189
A T ++ + +GS D
Sbjct: 294 ASPRSTSTKGKEPVGVARGSGSYSD 318
>gi|190341561|gb|ACE74857.1| RecN [Enterobacter radicincitans]
Length = 553
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + S Y L Q+ + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKSEHQKSLLD--GYAGEYALTQQMAEHYRTWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAQHQQQSQERAARAELLHYQLKELNEFHPQPGEFEQIDEEYKRLANSGQLLSTSQHALN 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 VLADGEEVNL 242
>gi|253988754|ref|YP_003040110.1| recombination and repair protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211637921|emb|CAR66549.1| dna repair protein recn (recombination protein n) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780204|emb|CAQ83365.1| dna repair protein recn (recombination protein n) [Photorhabdus
asymbiotica]
Length = 553
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 38 TYHRIRYLRQKALNIINHFVETGRNPDN-IAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
TY L+ + + ++ +N + L+ + ++ L ++L L PQ +
Sbjct: 148 TYANQFNLQHEMKQAYQKWHQSCQNLAQFQQQALERQSRQQLLEYHLKELNELAPQPGEY 207
Query: 97 AQRENFFKNLFRIGNILGFQKEEMVDITDH---RLLSLAYYA 135
+ +N +K L G +L + + ++D+ ++SL +A
Sbjct: 208 QEHDNEYKRLANRGQLLSVSQNALQLLSDNDEQNIISLLNHA 249
>gi|327279504|ref|XP_003224496.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Anolis
carolinensis]
Length = 2550
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/189 (6%), Positives = 46/189 (24%), Gaps = 12/189 (6%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETY-----HRIRYLRQKALNIINH 55
+Q Q ++ +Q + I ++ P + ++
Sbjct: 2050 LQPQVQVFSQLQSHVVAQIQAQQGGLP-QQIKLQLPIQIQQAGPMQAHQIQNVVTVQAAS 2108
Query: 56 FVETGRNPDNIAKELDSEILEKK-LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILG 114
E + + ++ + + + E+ + +
Sbjct: 2109 VQEQLQRVQQLREQQQKKKHQHIEIKREHSLQASNQSDIIQKQVVMKHNAVIEHLKQKKT 2168
Query: 115 FQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQ 174
E + + R++ + + + K + + ++ + T
Sbjct: 2169 LTPAEREE--NQRMI-VCNQVMKY--ILDKIDKEEKQAAKKRKREESVEQKRSKQNATKL 2223
Query: 175 EKAIQKLYQ 183
+ K +
Sbjct: 2224 SALLFKHKE 2232
>gi|168234207|ref|ZP_02659265.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472698|ref|ZP_03078682.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194459062|gb|EDX47901.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205331829|gb|EDZ18593.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 553
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|62181254|ref|YP_217671.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62128887|gb|AAX66590.1| recombination and DNA repair protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322715740|gb|EFZ07311.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 553
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|156401260|ref|XP_001639209.1| predicted protein [Nematostella vectensis]
gi|156226336|gb|EDO47146.1| predicted protein [Nematostella vectensis]
Length = 870
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHL---FPQT 93
R RQK + ++ R + KE +K ++ + Q L + P
Sbjct: 707 LEAMRQEQERQKKDQELRRRMQEAREAEARQKEQQLLNKDKIVVQQQQNLVNKQPNLPAW 766
Query: 94 KDPAQRENFFKNLFRIGN 111
+ + N+ ++
Sbjct: 767 RTEPEGGGGEANMGKVLK 784
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 6/77 (7%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 47 QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL 106
Q+ + + + + L ++++++L A+ + + + + +
Sbjct: 440 QRRQAELEKQRQQQMEMEREQEVLRKQMIQQRLQAQIEAERQRQKEWQ--------KRKV 491
Query: 107 FRIGNILGFQKEEMVDI 123
+ N G +++ + ++
Sbjct: 492 EELLNQKGLEQDIVNNL 508
>gi|325283697|ref|YP_004256238.1| hypothetical protein Deipr_1481 [Deinococcus proteolyticus MRP]
gi|324315506|gb|ADY26621.1| hypothetical protein Deipr_1481 [Deinococcus proteolyticus MRP]
Length = 802
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/152 (7%), Positives = 38/152 (25%), Gaps = 25/152 (16%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ + + + E Q + + Q+ + ++
Sbjct: 502 EQERRQYETALERYQQELKTYDQRRPL-----------LIAEAE-QRREEQLQQLIQERE 549
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ S L +Q++ + R + L + +++
Sbjct: 550 QRIAQMEQERSAKYAALLEDREKQIK-----LSEKKHRREYALLLRQALVEHEQTAQQLR 604
Query: 122 DITDHRLLSLAYY--------AQIGLQSQKLS 145
+ + L L A L+ ++
Sbjct: 605 EQINGLYLRLLADCAETGYEQAMDWLKEMRVK 636
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 13/90 (14%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
N + L + +++N TL + TY + R + AL ++T
Sbjct: 474 NSPQQLEMRRQQRQKVLN---------TLHEEAIRTYEQERRQYETALERYQQELKTYDQ 524
Query: 63 PD----NIAKELDSEILEKKLIAENQQLEH 88
A++ E L++ + Q++
Sbjct: 525 RRPLLIAEAEQRREEQLQQLIQEREQRIAQ 554
>gi|223453042|gb|ACM89785.1| RecN [Cronobacter sakazakii]
gi|223453044|gb|ACM89786.1| RecN [Cronobacter sakazakii]
Length = 310
Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 99 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 156
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 157 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 216
Query: 122 DITDHR 127
+ D
Sbjct: 217 LLADAE 222
>gi|242240622|ref|YP_002988803.1| recombination and repair protein [Dickeya dadantii Ech703]
gi|242132679|gb|ACS86981.1| DNA repair protein RecN [Dickeya dadantii Ech703]
Length = 553
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 14/141 (9%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPT-----LEKTYPETYHRIRYLRQKALNIINHFV 57
+Q + L Q + H P+ +R + Q+
Sbjct: 115 SQLRELGQHLIQVHGQHAHQQLLKPDHQRQLLDAYADDPQLLSAMRQIWQQWHQSCRELA 174
Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
+ ++ E + L + ++L PQ + Q + +K L G ++ +
Sbjct: 175 QHQQSMFER------EARRELLQYQLKELNEFAPQIGEYEQIDIEYKRLANSGQLMSLSQ 228
Query: 118 EEMVDIT---DHRLLSLAYYA 135
+ + ++ D +L + + A
Sbjct: 229 QALQILSGNEDQNILGMLHSA 249
>gi|16765999|ref|NP_461614.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56414649|ref|YP_151724.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161615614|ref|YP_001589579.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167992464|ref|ZP_02573562.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168239454|ref|ZP_02664512.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168244707|ref|ZP_02669639.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262143|ref|ZP_02684116.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168464143|ref|ZP_02698060.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168823039|ref|ZP_02835039.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194443554|ref|YP_002041945.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449811|ref|YP_002046687.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194737809|ref|YP_002115693.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197264124|ref|ZP_03164198.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363576|ref|YP_002143213.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|200386918|ref|ZP_03213530.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|207858031|ref|YP_002244682.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584535|ref|YP_002638333.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909526|ref|ZP_04653363.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16421231|gb|AAL21573.1| protein used in recombination and DNA repair [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|56128906|gb|AAV78412.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161364978|gb|ABX68746.1| hypothetical protein SPAB_03397 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402217|gb|ACF62439.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408115|gb|ACF68334.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194713311|gb|ACF92532.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633405|gb|EDX51819.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197095053|emb|CAR60599.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197242379|gb|EDY24999.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287860|gb|EDY27248.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199604016|gb|EDZ02561.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205329265|gb|EDZ16029.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205336458|gb|EDZ23222.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205340644|gb|EDZ27408.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349004|gb|EDZ35635.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709834|emb|CAR34186.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224469062|gb|ACN46892.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247874|emb|CBG25704.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994827|gb|ACY89712.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159243|emb|CBW18758.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913706|dbj|BAJ37680.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087161|emb|CBY96928.1| DNA repair protein recN Recombination protein N [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321223475|gb|EFX48540.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614469|gb|EFY11400.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621466|gb|EFY18319.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624327|gb|EFY21160.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629374|gb|EFY26152.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633614|gb|EFY30356.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638343|gb|EFY35041.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639781|gb|EFY36464.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647358|gb|EFY43854.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650473|gb|EFY46883.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656034|gb|EFY52334.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661428|gb|EFY57653.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662628|gb|EFY58836.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667001|gb|EFY63176.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671370|gb|EFY67493.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677623|gb|EFY73686.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681551|gb|EFY77581.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683951|gb|EFY79961.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131027|gb|ADX18457.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195520|gb|EFZ80698.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197893|gb|EFZ83016.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203071|gb|EFZ88103.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323205312|gb|EFZ90287.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210538|gb|EFZ95422.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218181|gb|EGA02893.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221553|gb|EGA05966.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223773|gb|EGA08078.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230944|gb|EGA15062.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234704|gb|EGA18790.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238743|gb|EGA22793.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241443|gb|EGA25474.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246860|gb|EGA30827.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253259|gb|EGA37089.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257055|gb|EGA40764.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260472|gb|EGA44083.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264471|gb|EGA47977.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269606|gb|EGA53059.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332989608|gb|AEF08591.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 553
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|197249669|ref|YP_002147619.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197213372|gb|ACH50769.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 553
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|126695347|ref|YP_001090233.1| signal recognition particle docking protein FtsY [Prochlorococcus
marinus str. MIT 9301]
gi|126542390|gb|ABO16632.1| signal recognition particle docking protein FtsY [Prochlorococcus
marinus str. MIT 9301]
Length = 439
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 5/72 (6%), Positives = 25/72 (34%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
+ Y ++ + + + E + ++ +++ E Q+ E + +
Sbjct: 15 QAYALLKKQQVEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQ 74
Query: 97 AQRENFFKNLFR 108
+++ ++
Sbjct: 75 EEQKQELIDITN 86
>gi|42693|emb|CAA68435.1| unnamed protein product [Escherichia coli K-12]
Length = 567
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 114 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 171
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 172 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 231
Query: 122 DITD 125
+ D
Sbjct: 232 LMAD 235
>gi|328767665|gb|EGF77714.1| hypothetical protein BATDEDRAFT_91375 [Batrachochytrium
dendrobatidis JAM81]
Length = 539
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 9/93 (9%)
Query: 53 INHFVETGRNPDNIAKELD----SEILEKKLIAENQQLEHLFPQTKDPAQ---RENFFKN 105
++ E + + KL + ++LE P+T DP+ E +
Sbjct: 243 VDAERAERERQRQEEIEAQNRNFEAMQQMKLRGQQKRLEAYGPETSDPSFPPLLEKMRDD 302
Query: 106 LFRIGNILGFQKEEMVDITD--HRLLSLAYYAQ 136
+ I + ++ + IT H
Sbjct: 303 MLNIIDDTSSTEDTVPTITTVVHNHTDEMNDQM 335
>gi|223453032|gb|ACM89780.1| RecN [Cronobacter sakazakii]
Length = 310
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 100 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 157
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 158 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 217
Query: 122 DITDHR 127
+ D
Sbjct: 218 LLADAE 223
>gi|204929454|ref|ZP_03220528.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204321173|gb|EDZ06373.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 553
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|198241855|ref|YP_002216692.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197936371|gb|ACH73704.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326624449|gb|EGE30794.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 553
Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|254572335|ref|XP_002493277.1| Component of the Paf1p complex [Pichia pastoris GS115]
gi|238033075|emb|CAY71098.1| Component of the Paf1p complex [Pichia pastoris GS115]
gi|328352706|emb|CCA39104.1| RNA polymerase-associated protein CTR9 homolog [Pichia pastoris CBS
7435]
Length = 1044
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++N L + ++L +L P S L+ + +R ++A+ + +
Sbjct: 816 LENALSGLNDAIKSLLKLAELEQPPYPSEDLKARATMGSNTLRNQLERAIQDQQDYEMSI 875
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHL 89
+ A+ EK+L E ++LE
Sbjct: 876 QEKLRTARRKQQLDEEKRLEQEQRRLEEA 904
>gi|213052725|ref|ZP_03345603.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424856|ref|ZP_03357606.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647048|ref|ZP_03377101.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 569
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|299146546|ref|ZP_07039614.1| MutS2 family protein [Bacteroides sp. 3_1_23]
gi|298517037|gb|EFI40918.1| MutS2 family protein [Bacteroides sp. 3_1_23]
Length = 833
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 553 IRQREKHMEETITRYQTEIEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 612
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + A+ + ++ E +K
Sbjct: 613 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AKKMEKLKEKQERKKNKKSEPKAA 667
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 668 VSSPSSAPK 676
>gi|26248980|ref|NP_755020.1| recombination and repair protein [Escherichia coli CFT073]
gi|91211951|ref|YP_541937.1| recombination and repair protein [Escherichia coli UTI89]
gi|110642776|ref|YP_670506.1| recombination and repair protein [Escherichia coli 536]
gi|117624837|ref|YP_853750.1| recombination and repair protein [Escherichia coli APEC O1]
gi|191171389|ref|ZP_03032938.1| DNA repair protein RecN [Escherichia coli F11]
gi|218559535|ref|YP_002392448.1| recombination and repair protein [Escherichia coli S88]
gi|227888182|ref|ZP_04005987.1| recombination and repair protein [Escherichia coli 83972]
gi|237706796|ref|ZP_04537277.1| recombination and repair protein [Escherichia sp. 3_2_53FAA]
gi|300986814|ref|ZP_07177803.1| DNA repair protein RecN [Escherichia coli MS 45-1]
gi|301050487|ref|ZP_07197365.1| DNA repair protein RecN [Escherichia coli MS 185-1]
gi|331658763|ref|ZP_08359705.1| DNA repair protein RecN [Escherichia coli TA206]
gi|26109386|gb|AAN81588.1|AE016764_270 DNA repair protein recN [Escherichia coli CFT073]
gi|91073525|gb|ABE08406.1| DNA repair protein RecN [Escherichia coli UTI89]
gi|110344368|gb|ABG70605.1| DNA repair protein RecN [Escherichia coli 536]
gi|115513961|gb|ABJ02036.1| DNA recombination and repair protein RecN [Escherichia coli APEC
O1]
gi|190908323|gb|EDV67913.1| DNA repair protein RecN [Escherichia coli F11]
gi|218366304|emb|CAR04055.1| recombination and repair protein [Escherichia coli S88]
gi|226899836|gb|EEH86095.1| recombination and repair protein [Escherichia sp. 3_2_53FAA]
gi|227834822|gb|EEJ45288.1| recombination and repair protein [Escherichia coli 83972]
gi|294493325|gb|ADE92081.1| DNA repair protein RecN [Escherichia coli IHE3034]
gi|300297795|gb|EFJ54180.1| DNA repair protein RecN [Escherichia coli MS 185-1]
gi|300407866|gb|EFJ91404.1| DNA repair protein RecN [Escherichia coli MS 45-1]
gi|307554628|gb|ADN47403.1| ATPase involved in DNA repair [Escherichia coli ABU 83972]
gi|307625835|gb|ADN70139.1| recombination and repair protein [Escherichia coli UM146]
gi|315290943|gb|EFU50308.1| DNA repair protein RecN [Escherichia coli MS 153-1]
gi|315298665|gb|EFU57919.1| DNA repair protein RecN [Escherichia coli MS 16-3]
gi|323951186|gb|EGB47062.1| DNA repair protein RecN [Escherichia coli H252]
gi|323957017|gb|EGB52743.1| DNA repair protein RecN [Escherichia coli H263]
gi|324012454|gb|EGB81673.1| DNA repair protein RecN [Escherichia coli MS 60-1]
gi|331053345|gb|EGI25374.1| DNA repair protein RecN [Escherichia coli TA206]
Length = 553
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSQLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|302501324|ref|XP_003012654.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371]
gi|291176214|gb|EFE32014.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371]
Length = 1580
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + LE E R + Q L + V
Sbjct: 1105 EEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRRQEEELAREKEAAQARLKALEEQVR 1164
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1165 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1224
Query: 119 E 119
E
Sbjct: 1225 E 1225
>gi|325127792|gb|EGC50700.1| IgA-specific serine endopeptidase [Neisseria meningitidis N1568]
Length = 1566
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 14/191 (7%)
Query: 3 NQAKILAQSAEALAQLINHHIPDD-------SSPTLEKTYPETYHRIRYLRQKALNIINH 55
+ A A A+ Q I SP + E R + ++
Sbjct: 988 SPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQA--EEALRQQARAEQVKRQQAE 1045
Query: 56 FVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ AK + ++ E Q+LE + A+
Sbjct: 1046 AEKVAHQKAEEAKRQQDALARQQAEQERQRLEAE----RQAAEIAKQKAEAEE-AKRRAA 1100
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
+ E + A A+ +++K +E A + + K + E
Sbjct: 1101 EIAEQKAAAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREAAE 1160
Query: 176 KAIQKLYQTGS 186
A QK + G
Sbjct: 1161 LAKQKAEEEGR 1171
>gi|300990714|ref|ZP_07179299.1| DNA repair protein RecN [Escherichia coli MS 200-1]
gi|300305682|gb|EFJ60202.1| DNA repair protein RecN [Escherichia coli MS 200-1]
gi|315284843|gb|EFU44288.1| DNA repair protein RecN [Escherichia coli MS 110-3]
Length = 553
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSQLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|66816795|ref|XP_642396.1| hypothetical protein DDB_G0278487 [Dictyostelium discoideum AX4]
gi|74997186|sp|Q54Y06|Y8487_DICDI RecName: Full=Probable cyclin-dependent serine/threonine-protein
kinase DDB_G0278487
gi|60470436|gb|EAL68416.1| hypothetical protein DDB_G0278487 [Dictyostelium discoideum AX4]
Length = 636
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 3/67 (4%), Positives = 18/67 (26%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
+ + L + + L + + + ++ +++ + +
Sbjct: 413 KRQRLLKRQQELKKQQDEQRQQELIKKQQEQEQLRLKVEHEKQRQEQERLRLIQQEQERL 472
Query: 64 DNIAKEL 70
+E
Sbjct: 473 KRQQQEH 479
>gi|217326827|ref|ZP_03442910.1| DNA repair protein RecN [Escherichia coli O157:H7 str. TW14588]
gi|217319194|gb|EEC27619.1| DNA repair protein RecN [Escherichia coli O157:H7 str. TW14588]
Length = 522
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|308494771|ref|XP_003109574.1| CRE-SDC-2 protein [Caenorhabditis remanei]
gi|308245764|gb|EFO89716.1| CRE-SDC-2 protein [Caenorhabditis remanei]
Length = 4287
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/197 (10%), Positives = 48/197 (24%), Gaps = 29/197 (14%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKT--------------YPETYHRIRYLRQK 48
K A+ A +L+ + + L +++ +K
Sbjct: 2243 QSRKRHAEKIAARKKLVKANATESDFEALNLEIERREKVRAKQELIDKIHAMKLKDKVKK 2302
Query: 49 ALNIINHFVE--TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL 106
+ + ++ KE + L + + E +
Sbjct: 2303 LQEKAERRQQMLENQRMNSYIKESNRRERSLYLA-----------ELALEKKNEEHVAKI 2351
Query: 107 FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK 166
++ ++E + L A A + + E K
Sbjct: 2352 KKMAEEAEKARQEKIRKQKEEELKAAREA--ARKLAEEKEKQRLAEEAAKKRKEEERIRK 2409
Query: 167 NHRRITSQEKAIQKLYQ 183
+ Q++A +K Q
Sbjct: 2410 EQEELRKQKEAEKKERQ 2426
>gi|281179661|dbj|BAI55991.1| DNA repair protein RecN [Escherichia coli SE15]
Length = 553
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSQLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|198421268|ref|XP_002122655.1| PREDICTED: similar to zonadhesin, partial [Ciona intestinalis]
Length = 2534
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 35/211 (16%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
QA+ AQ E+ Q + + + + R ++
Sbjct: 1955 QQAEQSAQRLESTKQRLEQERAEAEKK---------FAQERLELEEEGKRRIAMEMEDFE 2005
Query: 63 PDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL-------------FRI 109
+ ++ +K + ++ + KD +RE + + +I
Sbjct: 2006 KQLAEETKAEKLKAEKTLQTLEKRKEKM--LKD--KREKMKEEIDRAAAAGASEEEQRKI 2061
Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
E+ + D L + +Q+ + +K ++ + T + +
Sbjct: 2062 LEQHERDVEKFTNKMDRERLRM--QSQLEERLKKRRKEKMQAKKGDIEQQQETTRKEMDD 2119
Query: 170 RITS-----QEKAIQKLYQTGSL--YDSLEI 193
+ + QEK IQ + +T L DS ++
Sbjct: 2120 KQKAELQQVQEKQIQAMQETSKLIEQDSAKL 2150
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 15/91 (16%)
Query: 30 TLEKTYPETYHRIRYLR--------QKALNIINHFVETGRNPDNIAKELDSEILEKKLIA 81
L++ + + Y + Q+A T + + E + + +++L
Sbjct: 1930 ELKEKHYQEYAQTVRELAPSVAQSAQQAEQSAQRLESTKQRLEQERAEAEKKFAQERLEL 1989
Query: 82 ENQ-------QLEHLFPQTKDPAQRENFFKN 105
E + ++E Q + + E
Sbjct: 1990 EEEGKRRIAMEMEDFEKQLAEETKAEKLKAE 2020
>gi|331674055|ref|ZP_08374817.1| DNA repair protein RecN [Escherichia coli TA280]
gi|331068794|gb|EGI40187.1| DNA repair protein RecN [Escherichia coli TA280]
Length = 553
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|302663302|ref|XP_003023295.1| hypothetical protein TRV_02569 [Trichophyton verrucosum HKI 0517]
gi|291187285|gb|EFE42677.1| hypothetical protein TRV_02569 [Trichophyton verrucosum HKI 0517]
Length = 1461
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + L+ E R + Q L + V
Sbjct: 1015 EEALAIRAKEEQEAALRQEQQAQEAETEQLKDETRRQEEELAREKEAAQARLKALEEQVR 1074
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1075 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1134
Query: 119 E 119
E
Sbjct: 1135 E 1135
>gi|222034317|emb|CAP77058.1| DNA repair protein recN [Escherichia coli LF82]
gi|312947187|gb|ADR28014.1| recombination and repair protein [Escherichia coli O83:H1 str. NRG
857C]
Length = 553
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSQLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|168789518|ref|ZP_02814525.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC869]
gi|261227498|ref|ZP_05941779.1| recombination and repair protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255692|ref|ZP_05948225.1| recombination and repair protein [Escherichia coli O157:H7 str.
FRIK966]
gi|189370855|gb|EDU89271.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC869]
Length = 553
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|223453038|gb|ACM89783.1| RecN [Cronobacter malonaticus]
Length = 303
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 99 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 156
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 157 LALHQQQSQERAARAELLHYQLRELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 216
Query: 122 DITDHR 127
+ D
Sbjct: 217 LLADAE 222
>gi|205353720|ref|YP_002227521.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205273501|emb|CAR38478.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326628826|gb|EGE35169.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 553
Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEGVNL 242
>gi|16761536|ref|NP_457153.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143007|ref|NP_806349.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|289824181|ref|ZP_06543776.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25300521|pir||AG0834 DNA repair protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503837|emb|CAD05862.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138640|gb|AAO70209.1| DNA repair protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 553
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|732874|emb|CAA57857.1| IgA1 protease [Neisseria meningitidis]
Length = 1561
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 49/182 (26%), Gaps = 13/182 (7%)
Query: 9 AQSAEALAQLINHH----IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
+Q+ AQ+ P + R + ++ +
Sbjct: 994 SQAQTDSAQIAKPQNIVVAPPSPQANQAE----EAKRQQAKAEQVKRQQAEAEKVAHQKA 1049
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT 124
AK + ++ E Q+LE + A+ + E
Sbjct: 1050 EEAKRQQDALARQQAEQERQRLEAE----RQAAEIAKQKAEAEE-AKRRAAEIAEQKAAA 1104
Query: 125 DHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQT 184
+ A A+ +++K +E A + + K + E A QK +
Sbjct: 1105 EEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREAAELAKQKAEEE 1164
Query: 185 GS 186
G
Sbjct: 1165 GR 1166
>gi|254670510|emb|CBA06270.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha153]
Length = 1550
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 49/182 (26%), Gaps = 13/182 (7%)
Query: 9 AQSAEALAQLINHH----IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
+Q+ AQ+ P + R + ++ +
Sbjct: 983 SQAQTDSAQIAKPQNIVVAPPSPQANQAE----EAKRQQAKAEQVKRQQAEAEKVAHQKA 1038
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT 124
AK + ++ E Q+LE + A+ + E
Sbjct: 1039 EEAKRQQDALARQQAEQERQRLEAE----RQAAEIAKQKAEAEE-AKRRAAEIAEQKAAA 1093
Query: 125 DHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQT 184
+ A A+ +++K +E A + + K + E A QK +
Sbjct: 1094 EEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREAAELAKQKAEEE 1153
Query: 185 GS 186
G
Sbjct: 1154 GR 1155
>gi|300819936|ref|ZP_07100118.1| DNA repair protein RecN [Escherichia coli MS 107-1]
gi|300527477|gb|EFK48539.1| DNA repair protein RecN [Escherichia coli MS 107-1]
Length = 569
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 131 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 188
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 189 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 248
Query: 122 DITD 125
+ D
Sbjct: 249 LMAD 252
>gi|15803136|ref|NP_289168.1| recombination and repair protein [Escherichia coli O157:H7 EDL933]
gi|15832732|ref|NP_311505.1| recombination and repair protein [Escherichia coli O157:H7 str.
Sakai]
gi|168755358|ref|ZP_02780365.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4401]
gi|168762408|ref|ZP_02787415.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4501]
gi|168768703|ref|ZP_02793710.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4486]
gi|168800495|ref|ZP_02825502.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC508]
gi|195939667|ref|ZP_03085049.1| recombination and repair protein [Escherichia coli O157:H7 str.
EC4024]
gi|208809614|ref|ZP_03251951.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4206]
gi|208812442|ref|ZP_03253771.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4045]
gi|208819371|ref|ZP_03259691.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4042]
gi|209397502|ref|YP_002272085.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4115]
gi|254794561|ref|YP_003079398.1| recombination and repair protein [Escherichia coli O157:H7 str.
TW14359]
gi|291283887|ref|YP_003500705.1| recombination and repair protein [Escherichia coli O55:H7 str.
CB9615]
gi|12517040|gb|AAG57726.1|AE005491_6 protein used in recombination and DNA repair [Escherichia coli
O157:H7 str. EDL933]
gi|13362949|dbj|BAB36901.1| DNA repair protein RecN [Escherichia coli O157:H7 str. Sakai]
gi|189357331|gb|EDU75750.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4401]
gi|189362141|gb|EDU80560.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4486]
gi|189367302|gb|EDU85718.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4501]
gi|189377148|gb|EDU95564.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC508]
gi|208729415|gb|EDZ79016.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4206]
gi|208733719|gb|EDZ82406.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4045]
gi|208739494|gb|EDZ87176.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4042]
gi|209158902|gb|ACI36335.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC4115]
gi|209762488|gb|ACI79556.1| DNA repair protein RecN [Escherichia coli]
gi|209762490|gb|ACI79557.1| DNA repair protein RecN [Escherichia coli]
gi|209762492|gb|ACI79558.1| DNA repair protein RecN [Escherichia coli]
gi|209762494|gb|ACI79559.1| DNA repair protein RecN [Escherichia coli]
gi|209762496|gb|ACI79560.1| DNA repair protein RecN [Escherichia coli]
gi|254593961|gb|ACT73322.1| recombination and repair protein [Escherichia coli O157:H7 str.
TW14359]
gi|290763760|gb|ADD57721.1| recombination and repair protein [Escherichia coli O55:H7 str.
CB9615]
gi|320188949|gb|EFW63608.1| DNA repair protein RecN [Escherichia coli O157:H7 str. EC1212]
gi|320640798|gb|EFX10296.1| recombination and repair protein [Escherichia coli O157:H7 str.
G5101]
gi|320646143|gb|EFX15088.1| recombination and repair protein [Escherichia coli O157:H- str.
493-89]
gi|320651440|gb|EFX19841.1| recombination and repair protein [Escherichia coli O157:H- str. H
2687]
gi|320662708|gb|EFX30052.1| recombination and repair protein [Escherichia coli O55:H7 str. USDA
5905]
gi|320667525|gb|EFX34449.1| recombination and repair protein [Escherichia coli O157:H7 str.
LSU-61]
gi|326344366|gb|EGD68124.1| DNA repair protein RecN [Escherichia coli O157:H7 str. 1125]
gi|326347735|gb|EGD71452.1| DNA repair protein RecN [Escherichia coli O157:H7 str. 1044]
Length = 553
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|321399344|emb|CAM67317.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 2678
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 3/106 (2%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
AK LA+ A L + +R +A +
Sbjct: 998 AKELAELRAREASYAAELQAA--LERLREAE-RRVAEEAAIRAQAEQERQAAHAESQRLL 1054
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIG 110
A++ + + + A Q L+ +D A R + +
Sbjct: 1055 QEAEQRAEQRIREARDAAEQLLQAQLADLRDEAVRRAEHAAVMQAL 1100
>gi|320198388|gb|EFW72990.1| DNA repair protein RecN [Escherichia coli EC4100B]
Length = 553
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
I D
Sbjct: 233 LIAD 236
>gi|331664181|ref|ZP_08365090.1| DNA repair protein RecN [Escherichia coli TA143]
gi|331058638|gb|EGI30616.1| DNA repair protein RecN [Escherichia coli TA143]
Length = 553
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|293412005|ref|ZP_06654728.1| DNA repair protein RecN [Escherichia coli B354]
gi|291468776|gb|EFF11267.1| DNA repair protein RecN [Escherichia coli B354]
Length = 553
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|218547866|ref|YP_002381657.1| recombination and repair protein [Escherichia fergusonii ATCC
35469]
gi|218355407|emb|CAQ88016.1| recombination and repair protein [Escherichia fergusonii ATCC
35469]
gi|323963924|gb|EGB59417.1| DNA repair protein RecN [Escherichia coli M863]
gi|325496317|gb|EGC94176.1| recombination and repair protein [Escherichia fergusonii ECD227]
gi|327252321|gb|EGE63993.1| DNA repair protein RecN [Escherichia coli STEC_7v]
Length = 553
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|304398634|ref|ZP_07380506.1| DNA repair protein RecN [Pantoea sp. aB]
gi|304353845|gb|EFM18220.1| DNA repair protein RecN [Pantoea sp. aB]
Length = 553
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R
Sbjct: 115 SQLRDLGQLLIQIHGQHAHQLLLKPDHQKHLLD--AYAGHDELLQQMRASYQTWNQSCRT 172
Query: 63 PDNIAKELDSEI-LEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQAQERESRRELLQYQLKELNDFAPQPGEYEQIDEEYKRLANSGQLLSTSQQALQ 232
Query: 122 DITDH 126
+ D
Sbjct: 233 LLADS 237
>gi|190341589|gb|ACE74871.1| RecN [Pantoea sp. E147]
Length = 553
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R
Sbjct: 115 SQLRDLGQLLIQIHGQHAHQLLLKPDHQKHLLD--AYAGHDDLLQQMRASYQAWHQSCRT 172
Query: 63 PDNIAKELDSEI-LEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQAQERESRRELLQYQLKELNDFAPQQGEYEQIDEEYKRLANSGQLLSTSQQALQ 232
Query: 122 DITDH 126
+ D
Sbjct: 233 LLADS 237
>gi|223453034|gb|ACM89781.1| RecN [Cronobacter sakazakii]
Length = 298
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 99 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 156
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 157 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 216
Query: 122 DITDHR 127
+ D
Sbjct: 217 LLADAE 222
>gi|330830466|ref|YP_004393418.1| DNA repair protein RecN [Aeromonas veronii B565]
gi|328805602|gb|AEB50801.1| DNA repair protein RecN [Aeromonas veronii B565]
Length = 554
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 3/86 (3%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
Q K L Q + H + L Y L + + +
Sbjct: 116 QLKNLGQLLVNVHGQHAHQMLLKPDYQLALLD--GYAGHHLLLDEVRQHYQQWRQLQNEL 173
Query: 64 DNIAKELDSEI-LEKKLIAENQQLEH 88
+ + E + + + Q+L+
Sbjct: 174 NRLKAEQQQREARRQLIEYQVQELDE 199
>gi|223453036|gb|ACM89782.1| RecN [Cronobacter malonaticus]
Length = 293
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 99 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 156
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 157 LALHQQQSQERAARAELLHYQLRELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 216
Query: 122 DITDHR 127
+ D
Sbjct: 217 LLADAE 222
>gi|170683348|ref|YP_001744799.1| recombination and repair protein [Escherichia coli SMS-3-5]
gi|170521066|gb|ACB19244.1| DNA repair protein RecN [Escherichia coli SMS-3-5]
Length = 553
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|324111251|gb|EGC05233.1| DNA repair protein RecN [Escherichia fergusonii B253]
Length = 553
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|323978475|gb|EGB73558.1| DNA repair protein RecN [Escherichia coli TW10509]
Length = 553
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|322498509|emb|CBZ33582.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 2676
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 3/106 (2%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
AK LA+ A L + +R +A +
Sbjct: 998 AKELAELRAREASYAAELQAA--LERLREAE-RRVAEEAAIRAQAEQERQAAHAESQRLL 1054
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIG 110
A++ + + + A Q L+ +D A R + +
Sbjct: 1055 QEAEQRAEQRIREARDAAEQLLQAQLADLRDEAVRRAEHAAVMQAL 1100
>gi|284922561|emb|CBG35648.1| DNA repair protein [Escherichia coli 042]
Length = 553
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|167553515|ref|ZP_02347264.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322061|gb|EDZ09900.1| DNA repair protein RecN [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 553
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|282901675|ref|ZP_06309591.1| protein of unknown function DUF820 [Cylindrospermopsis raciborskii
CS-505]
gi|281193438|gb|EFA68419.1| protein of unknown function DUF820 [Cylindrospermopsis raciborskii
CS-505]
Length = 316
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 20/64 (31%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
+ + ++ + A++ ++KL AE ++L + + E
Sbjct: 246 QEKQRAEQEKQRTEQEKQRAEQEKQRAEQEKQRAEQEKLRAEQEKLRAEQEKLRADKLAE 305
Query: 101 NFFK 104
Sbjct: 306 KLAA 309
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 6/56 (10%), Positives = 19/56 (33%)
Query: 32 EKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLE 87
+ + + + ++ + A++ ++KL AE ++L
Sbjct: 244 AEQEKQRAEQEKQRTEQEKQRAEQEKQRAEQEKQRAEQEKLRAEQEKLRAEQEKLR 299
>gi|218701127|ref|YP_002408756.1| recombination and repair protein [Escherichia coli IAI39]
gi|218371113|emb|CAR18941.1| recombination and repair protein [Escherichia coli IAI39]
Length = 553
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|72000917|ref|NP_001024201.1| TiTiN family member (ttn-1) [Caenorhabditis elegans]
gi|24620455|gb|AAN61519.1| 1MDa_1 protein [Caenorhabditis elegans]
Length = 10578
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 47/171 (27%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7071 DKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7130
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7131 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLKKENDDKLKQEADAKL---- 7177
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K K + +++A KL +
Sbjct: 7178 -KKEKHDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQK 7227
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 14/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7055 DKLKQEADAKLKKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQ 7114
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7115 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKL---- 7161
Query: 133 YYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + ++ ++ K +H K + +++A KL +
Sbjct: 7162 -KKENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLKQEADAKLQK 7211
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/174 (10%), Positives = 47/174 (27%), Gaps = 12/174 (6%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDS 72
+ L Q + + ++ L++ + + K E A
Sbjct: 7023 DKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKENDDKLKQEADAKLQ 7082
Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLA 132
+ + KL E ++ + + + +++ D +L
Sbjct: 7083 KENDDKLKQEADAKLQK----ENDDKLKQEAD-----AKLQKENDDKLKQEADAKLQKEN 7133
Query: 133 YYAQIGL---QSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ QK ++D + +K K +++ KL Q
Sbjct: 7134 DDKLKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7187
>gi|306812467|ref|ZP_07446665.1| recombination and repair protein [Escherichia coli NC101]
gi|305854505|gb|EFM54943.1| recombination and repair protein [Escherichia coli NC101]
gi|324005814|gb|EGB75033.1| DNA repair protein RecN [Escherichia coli MS 57-2]
Length = 553
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSQVQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|301026399|ref|ZP_07189843.1| DNA repair protein RecN [Escherichia coli MS 69-1]
gi|300395546|gb|EFJ79084.1| DNA repair protein RecN [Escherichia coli MS 69-1]
Length = 553
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|78778395|ref|YP_396507.1| signal recognition particle-docking protein FtsY [Prochlorococcus
marinus str. MIT 9312]
gi|78711894|gb|ABB49071.1| signal recognition particle-docking protein FtsY [Prochlorococcus
marinus str. MIT 9312]
Length = 430
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 5/52 (9%), Positives = 19/52 (36%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
+ Y ++ +++ + E + ++ +++ E Q+ E
Sbjct: 15 QAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEE 66
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 5/44 (11%), Positives = 13/44 (29%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQ 84
+ QK + + K+ + + +K + Q
Sbjct: 26 EQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQ 69
>gi|213855294|ref|ZP_03383534.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 531
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|218246166|ref|YP_002371537.1| hypothetical protein PCC8801_1317 [Cyanothece sp. PCC 8801]
gi|218166644|gb|ACK65381.1| protein of unknown function DUF820 [Cyanothece sp. PCC 8801]
Length = 295
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 36 PETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKD 95
P R ++K ++ +E +++ E Q+ E + +
Sbjct: 217 PTEQENQRAEQEKQRAEQEKQRAEQEKQRAEQEKQRAEQEKQRAEQEKQRAEQ---EKQR 273
Query: 96 PAQRENFFKNLFRIGNILGF 115
E L ++ G
Sbjct: 274 ADLAELEIARLRKLLEDSGL 293
>gi|82777974|ref|YP_404323.1| recombination and repair protein [Shigella dysenteriae Sd197]
gi|309784640|ref|ZP_07679275.1| DNA repair protein RecN [Shigella dysenteriae 1617]
gi|81242122|gb|ABB62832.1| protein used in recombination and DNA repair [Shigella dysenteriae
Sd197]
gi|308927537|gb|EFP73009.1| DNA repair protein RecN [Shigella dysenteriae 1617]
Length = 553
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQFLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|37527248|ref|NP_930592.1| recombination and repair protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786682|emb|CAE15748.1| DNA repair protein recN (recombination protein N) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 553
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 38 TYHRIRYLRQKALNIINHFVETGRNPDN-IAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
TY L+ + + ++ ++ + L+ + ++ L ++L L PQ +
Sbjct: 148 TYANQFNLQNEMKQAYQQWHQSCQDLARFQQQALERQSRQQLLEYHLKELNELAPQPGEY 207
Query: 97 AQRENFFKNLFRIGNILGFQKEEMVDITDH---RLLSLAYYA 135
+++N +K L G +L + + ++D+ ++SL YA
Sbjct: 208 PEQDNEYKRLANRGQLLSVSQTALQLLSDNDEQNIISLLNYA 249
>gi|300940954|ref|ZP_07155478.1| DNA repair protein RecN [Escherichia coli MS 21-1]
gi|300454278|gb|EFK17771.1| DNA repair protein RecN [Escherichia coli MS 21-1]
Length = 553
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|156374216|ref|XP_001629704.1| predicted protein [Nematostella vectensis]
gi|156216710|gb|EDO37641.1| predicted protein [Nematostella vectensis]
Length = 975
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 14/186 (7%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+ + + +Q E L Q + L R++ Q+ ++
Sbjct: 687 VTKKIEEYSQLEEKLKQSMADLEKR---ERLLSDNEAKVMRLKEELQRDHERKMTELKEA 743
Query: 61 RNPDNIAKELDSEILEKK---LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
E+ K L + Q+L Q +R +N F K
Sbjct: 744 ARRMKEDCAHQVEMERSKVRDLEQQKQRLVE---QLYAAEKRYQDKENEFMTHKERELSK 800
Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKA 177
E+ + A++ + + ++ H + K K + A
Sbjct: 801 PEV-KLQSELDFLRVEKAELERKLESSNKSKIHYKQQWGRALREVAKIKQQEQTV----A 855
Query: 178 IQKLYQ 183
+L +
Sbjct: 856 RARLKK 861
>gi|291618460|ref|YP_003521202.1| RecN [Pantoea ananatis LMG 20103]
gi|291153490|gb|ADD78074.1| RecN [Pantoea ananatis LMG 20103]
Length = 561
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 43/141 (30%), Gaps = 5/141 (3%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R
Sbjct: 123 SQLRDLGQLLIQIHGQHAHQLLLKPDHQKHLLD--AYAGHDDLLIQMRASYQTWHQSCRT 180
Query: 63 PDNIAKELDSEI-LEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 181 LAQHQQQAQERESRRELLQYQLKELNEFAPVAGEFEQIDEEYKRLANSGQLLSTSQQALQ 240
Query: 122 DITDHRLLSLAYYAQIGLQSQ 142
+ D +L + + Q
Sbjct: 241 LLADSDDTNL--NSMLYSARQ 259
>gi|218706116|ref|YP_002413635.1| recombination and repair protein [Escherichia coli UMN026]
gi|293406122|ref|ZP_06650048.1| recombination and repair protein [Escherichia coli FVEC1412]
gi|298381856|ref|ZP_06991453.1| DNA repair protein RecN [Escherichia coli FVEC1302]
gi|300900197|ref|ZP_07118386.1| DNA repair protein RecN [Escherichia coli MS 198-1]
gi|218433213|emb|CAR14111.1| recombination and repair protein [Escherichia coli UMN026]
gi|291426128|gb|EFE99160.1| recombination and repair protein [Escherichia coli FVEC1412]
gi|298276996|gb|EFI18512.1| DNA repair protein RecN [Escherichia coli FVEC1302]
gi|300356312|gb|EFJ72182.1| DNA repair protein RecN [Escherichia coli MS 198-1]
Length = 553
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|327394856|dbj|BAK12278.1| DNA repair protein RecN [Pantoea ananatis AJ13355]
Length = 553
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 43/141 (30%), Gaps = 5/141 (3%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R
Sbjct: 115 SQLRDLGQLLIQIHGQHAHQLLLKPDHQKHLLD--AYAGHDDLLIQMRASYQTWHQSCRT 172
Query: 63 PDNIAKELDSEI-LEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L P + Q + +K L G +L ++ +
Sbjct: 173 LAQHQQQAQERESRRELLQYQLKELNEFAPVAGEFEQIDEEYKRLANSGQLLSTSQQALQ 232
Query: 122 DITDHRLLSLAYYAQIGLQSQ 142
+ D +L + + Q
Sbjct: 233 LLADSDDTNL--NSMLYSARQ 251
>gi|331684271|ref|ZP_08384863.1| DNA repair protein RecN [Escherichia coli H299]
gi|331077886|gb|EGI49092.1| DNA repair protein RecN [Escherichia coli H299]
Length = 553
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 VMAD 236
>gi|293415886|ref|ZP_06658526.1| DNA repair protein RecN [Escherichia coli B185]
gi|291432075|gb|EFF05057.1| DNA repair protein RecN [Escherichia coli B185]
Length = 553
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|194427848|ref|ZP_03060394.1| DNA repair protein RecN [Escherichia coli B171]
gi|194414081|gb|EDX30357.1| DNA repair protein RecN [Escherichia coli B171]
Length = 553
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|237844347|ref|XP_002371471.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211969135|gb|EEB04331.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221481252|gb|EEE19649.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1858
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 52/192 (27%), Gaps = 20/192 (10%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIR--------YLRQKALNI 52
+ +Q K + E L + + + ++ Q+AL+
Sbjct: 1181 VASQKKRIQTLQEELDE--EAQQSHKDLTQVLQK--LSFAEQERAKLAHSLATAQEALHT 1236
Query: 53 INHFVETGRNPDNIAKELDSEILEKKLIA--ENQQLEHLFPQTKDPAQRENFFKNLFRIG 110
+ + A L ++ +K + +Q E + +D + L
Sbjct: 1237 FQKNKSSQERLEREASALRQQLKSQKSEQAHQLRQAEEAIGEWRDAH--AKLQEALVETE 1294
Query: 111 NILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRR 170
+ E DH L + + + +D + R
Sbjct: 1295 EHRKSEVNERQAEVDH----LKKQVRQLEEELQQVKDQVDMTSQSTIEAERQRRVAAEER 1350
Query: 171 ITSQEKAIQKLY 182
+ E A+ +L
Sbjct: 1351 VDELEAALNELA 1362
>gi|221501947|gb|EEE27698.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1819
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 50/192 (26%), Gaps = 20/192 (10%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIR--------YLRQKALNI 52
+ Q K + E L + + + ++ Q+AL
Sbjct: 1181 VAAQKKRIQTLQEELDE--EAQQSHKDLTQVLQK--LSFAEQERAKLAHSLATAQEALQT 1236
Query: 53 INHFVETGRNPDNIAKELDSEILEKKLIA--ENQQLEHLFPQTKDPAQRENFFKNLFRIG 110
+ + A L ++ +K + +Q E + +D + L
Sbjct: 1237 FQKNKSSQERLEREASALRQQLKSQKSEQAHQLRQAEEAIGEWRDAH--AKLQEALVETE 1294
Query: 111 NILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRR 170
+ E DH L + + + +D + R
Sbjct: 1295 EHRKSEVNERQAEVDH----LKKQVRQLEEELQQVKDQVDMTSQSTIEAERQRRVAAEER 1350
Query: 171 ITSQEKAIQKLY 182
+ E A+ +L
Sbjct: 1351 VDELEAALNELA 1362
>gi|219128442|ref|XP_002184422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404223|gb|EEC44171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 958
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 7/116 (6%), Positives = 24/116 (20%), Gaps = 8/116 (6%)
Query: 9 AQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD---- 64
Q A + S + + Q +
Sbjct: 494 QQQRAAAQKRDRAQAKVASEKQRREQAKVVAAEKQRQEQAKAASAEKQRQEQAKAASVEK 553
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
++ ++K E Q+ + ++ + + +++
Sbjct: 554 QRQEQATRRAKQEKARQERQKRLEDI----EATKKAKLDQRMRETAKQTQIAEQKR 605
>gi|301644058|ref|ZP_07244074.1| DNA repair protein RecN [Escherichia coli MS 146-1]
gi|301077603|gb|EFK92409.1| DNA repair protein RecN [Escherichia coli MS 146-1]
Length = 553
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDS-EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQEHAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|168334752|ref|ZP_02692880.1| putative multidrug efflux pump, membrane protein [Epulopiscium sp.
'N.t. morphotype B']
Length = 1192
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 44/131 (33%), Gaps = 13/131 (9%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+QN+ Q A+ LA+ L + + + Q + +
Sbjct: 1048 LQNREMQKLQEAQDLAEEQRVQA----WQKLRREQEMQERQRQQDLQDGQDWQEQHEQQR 1103
Query: 61 RNPDNIAKELDSEILEKKLIAENQQ--LEHLFPQTKDPAQRENF------FKNLFRIGNI 112
+E++ +++ + ++ L+ L ++ + + + + ++
Sbjct: 1104 DQEQQKMEEMEDLHERQRIQDQRKRRDLKELL-DIRNTQKIKKLQELQKSKEYIEQMLQK 1162
Query: 113 LGFQKEEMVDI 123
L ++E + +
Sbjct: 1163 LSIREERLKQM 1173
>gi|190341579|gb|ACE74866.1| RecN [Escherichia hermannii]
Length = 553
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQVLIQIHGQHAHQLLLKPEHQRTLLD--GYAGEYALTQQMAQHYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LAAHQQQSQERTARAELLQYQLKELNEFAPQPGEYEQIDAEYKRLANSGQLLSTGQQALQ 232
Query: 122 DITD 125
ITD
Sbjct: 233 LITD 236
>gi|223453046|gb|ACM89787.1| RecN [Cronobacter sakazakii]
Length = 319
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 3/126 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R+
Sbjct: 99 SQLRELGQLLIQIHGQHAHQLLLKPEHQKRLLD--GYAGEGELMAQMAQSYRQWHQSCRD 156
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 157 LALHQQQSQERAARAELLHYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLSTSQQALN 216
Query: 122 DITDHR 127
+ D
Sbjct: 217 LLADAE 222
>gi|49176247|ref|YP_026172.1| recombination and repair protein [Escherichia coli str. K-12
substr. MG1655]
gi|74313205|ref|YP_311624.1| recombination and repair protein [Shigella sonnei Ss046]
gi|89109416|ref|AP_003196.1| recombination and repair protein [Escherichia coli str. K-12
substr. W3110]
gi|157162091|ref|YP_001459409.1| recombination and repair protein [Escherichia coli HS]
gi|170019108|ref|YP_001724062.1| recombination and repair protein [Escherichia coli ATCC 8739]
gi|170082218|ref|YP_001731538.1| recombination and repair protein [Escherichia coli str. K-12
substr. DH10B]
gi|188492326|ref|ZP_02999596.1| DNA repair protein RecN [Escherichia coli 53638]
gi|191167070|ref|ZP_03028891.1| DNA repair protein RecN [Escherichia coli B7A]
gi|193065987|ref|ZP_03047046.1| DNA repair protein RecN [Escherichia coli E22]
gi|193071256|ref|ZP_03052176.1| DNA repair protein RecN [Escherichia coli E110019]
gi|194432959|ref|ZP_03065242.1| DNA repair protein RecN [Shigella dysenteriae 1012]
gi|209920090|ref|YP_002294174.1| recombination and repair protein [Escherichia coli SE11]
gi|218555195|ref|YP_002388108.1| recombination and repair protein [Escherichia coli IAI1]
gi|218696239|ref|YP_002403906.1| recombination and repair protein [Escherichia coli 55989]
gi|238901775|ref|YP_002927571.1| recombination and repair protein [Escherichia coli BW2952]
gi|254037691|ref|ZP_04871749.1| recombination and repair protein [Escherichia sp. 1_1_43]
gi|256019566|ref|ZP_05433431.1| recombination and repair protein [Shigella sp. D9]
gi|256024858|ref|ZP_05438723.1| recombination and repair protein [Escherichia sp. 4_1_40B]
gi|260845297|ref|YP_003223075.1| recombination and repair protein RecN [Escherichia coli O103:H2
str. 12009]
gi|260856704|ref|YP_003230595.1| recombination and repair protein RecN [Escherichia coli O26:H11
str. 11368]
gi|260869296|ref|YP_003235698.1| recombination and repair protein RecN [Escherichia coli O111:H-
str. 11128]
gi|293448967|ref|ZP_06663388.1| DNA repair protein RecN [Escherichia coli B088]
gi|300825182|ref|ZP_07105272.1| DNA repair protein RecN [Escherichia coli MS 119-7]
gi|300905063|ref|ZP_07122873.1| DNA repair protein RecN [Escherichia coli MS 84-1]
gi|300921161|ref|ZP_07137539.1| DNA repair protein RecN [Escherichia coli MS 115-1]
gi|300925609|ref|ZP_07141479.1| DNA repair protein RecN [Escherichia coli MS 182-1]
gi|301026812|ref|ZP_07190214.1| DNA repair protein RecN [Escherichia coli MS 196-1]
gi|301305739|ref|ZP_07211826.1| DNA repair protein RecN [Escherichia coli MS 124-1]
gi|301326737|ref|ZP_07220051.1| DNA repair protein RecN [Escherichia coli MS 78-1]
gi|307139336|ref|ZP_07498692.1| recombination and repair protein [Escherichia coli H736]
gi|307315073|ref|ZP_07594657.1| DNA repair protein RecN [Escherichia coli W]
gi|309794127|ref|ZP_07688551.1| DNA repair protein RecN [Escherichia coli MS 145-7]
gi|331643332|ref|ZP_08344463.1| DNA repair protein RecN [Escherichia coli H736]
gi|331669366|ref|ZP_08370212.1| DNA repair protein RecN [Escherichia coli TA271]
gi|331678606|ref|ZP_08379280.1| DNA repair protein RecN [Escherichia coli H591]
gi|332280689|ref|ZP_08393102.1| recombination and repair protein [Shigella sp. D9]
gi|1710071|sp|P05824|RECN_ECOLI RecName: Full=DNA repair protein recN; AltName: Full=Recombination
protein N
gi|1800021|dbj|BAA16501.1| recombination and repair protein [Escherichia coli str. K12 substr.
W3110]
gi|48994901|gb|AAT48145.1| recombination and repair protein [Escherichia coli str. K-12
substr. MG1655]
gi|73856682|gb|AAZ89389.1| protein used in recombination and DNA repair [Shigella sonnei
Ss046]
gi|157067771|gb|ABV07026.1| DNA repair protein RecN [Escherichia coli HS]
gi|169754036|gb|ACA76735.1| DNA repair protein RecN [Escherichia coli ATCC 8739]
gi|169890053|gb|ACB03760.1| recombination and repair protein [Escherichia coli str. K-12
substr. DH10B]
gi|188487525|gb|EDU62628.1| DNA repair protein RecN [Escherichia coli 53638]
gi|190902852|gb|EDV62580.1| DNA repair protein RecN [Escherichia coli B7A]
gi|192926401|gb|EDV81036.1| DNA repair protein RecN [Escherichia coli E22]
gi|192955409|gb|EDV85892.1| DNA repair protein RecN [Escherichia coli E110019]
gi|194418686|gb|EDX34772.1| DNA repair protein RecN [Shigella dysenteriae 1012]
gi|209913349|dbj|BAG78423.1| DNA repair protein RecN [Escherichia coli SE11]
gi|218352971|emb|CAU98771.1| recombination and repair protein [Escherichia coli 55989]
gi|218361963|emb|CAQ99564.1| recombination and repair protein [Escherichia coli IAI1]
gi|226839315|gb|EEH71336.1| recombination and repair protein [Escherichia sp. 1_1_43]
gi|238863426|gb|ACR65424.1| recombination and repair protein [Escherichia coli BW2952]
gi|257755353|dbj|BAI26855.1| recombination and repair protein RecN [Escherichia coli O26:H11
str. 11368]
gi|257760444|dbj|BAI31941.1| recombination and repair protein RecN [Escherichia coli O103:H2
str. 12009]
gi|257765652|dbj|BAI37147.1| recombination and repair protein RecN [Escherichia coli O111:H-
str. 11128]
gi|260448311|gb|ACX38733.1| DNA repair protein RecN [Escherichia coli DH1]
gi|291322057|gb|EFE61486.1| DNA repair protein RecN [Escherichia coli B088]
gi|299879558|gb|EFI87769.1| DNA repair protein RecN [Escherichia coli MS 196-1]
gi|300403050|gb|EFJ86588.1| DNA repair protein RecN [Escherichia coli MS 84-1]
gi|300411892|gb|EFJ95202.1| DNA repair protein RecN [Escherichia coli MS 115-1]
gi|300418304|gb|EFK01615.1| DNA repair protein RecN [Escherichia coli MS 182-1]
gi|300522344|gb|EFK43413.1| DNA repair protein RecN [Escherichia coli MS 119-7]
gi|300838993|gb|EFK66753.1| DNA repair protein RecN [Escherichia coli MS 124-1]
gi|300846597|gb|EFK74357.1| DNA repair protein RecN [Escherichia coli MS 78-1]
gi|306905502|gb|EFN36036.1| DNA repair protein RecN [Escherichia coli W]
gi|308122032|gb|EFO59294.1| DNA repair protein RecN [Escherichia coli MS 145-7]
gi|309702995|emb|CBJ02326.1| DNA repair protein [Escherichia coli ETEC H10407]
gi|315061929|gb|ADT76256.1| recombination and repair protein [Escherichia coli W]
gi|315137233|dbj|BAJ44392.1| recombination and repair protein [Escherichia coli DH1]
gi|315615315|gb|EFU95950.1| DNA repair protein RecN [Escherichia coli 3431]
gi|320182471|gb|EFW57365.1| DNA repair protein RecN [Shigella boydii ATCC 9905]
gi|323156270|gb|EFZ42429.1| DNA repair protein RecN [Escherichia coli EPECa14]
gi|323159136|gb|EFZ45129.1| DNA repair protein RecN [Escherichia coli E128010]
gi|323167739|gb|EFZ53434.1| DNA repair protein RecN [Shigella sonnei 53G]
gi|323173067|gb|EFZ58698.1| DNA repair protein RecN [Escherichia coli LT-68]
gi|323177258|gb|EFZ62846.1| DNA repair protein RecN [Escherichia coli 1180]
gi|323184508|gb|EFZ69882.1| DNA repair protein RecN [Escherichia coli 1357]
gi|323377491|gb|ADX49759.1| DNA repair protein RecN [Escherichia coli KO11]
gi|323935670|gb|EGB31987.1| DNA repair protein RecN [Escherichia coli E1520]
gi|323941367|gb|EGB37551.1| DNA repair protein RecN [Escherichia coli E482]
gi|323946257|gb|EGB42290.1| DNA repair protein RecN [Escherichia coli H120]
gi|324016598|gb|EGB85817.1| DNA repair protein RecN [Escherichia coli MS 117-3]
gi|324120073|gb|EGC13949.1| DNA repair protein RecN [Escherichia coli E1167]
gi|331036803|gb|EGI09027.1| DNA repair protein RecN [Escherichia coli H736]
gi|331063034|gb|EGI34947.1| DNA repair protein RecN [Escherichia coli TA271]
gi|331073436|gb|EGI44757.1| DNA repair protein RecN [Escherichia coli H591]
gi|332088124|gb|EGI93249.1| DNA repair protein RecN [Shigella boydii 5216-82]
gi|332089208|gb|EGI94315.1| DNA repair protein RecN [Shigella dysenteriae 155-74]
gi|332103041|gb|EGJ06387.1| recombination and repair protein [Shigella sp. D9]
gi|332344485|gb|AEE57819.1| DNA repair protein RecN [Escherichia coli UMNK88]
Length = 553
Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|194439433|ref|ZP_03071509.1| DNA repair protein RecN [Escherichia coli 101-1]
gi|253772491|ref|YP_003035322.1| recombination and repair protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162585|ref|YP_003045693.1| recombination and repair protein [Escherichia coli B str. REL606]
gi|312973141|ref|ZP_07787314.1| DNA repair protein RecN [Escherichia coli 1827-70]
gi|194421609|gb|EDX37620.1| DNA repair protein RecN [Escherichia coli 101-1]
gi|242378210|emb|CAQ32985.1| protein used in recombination and DNA repair [Escherichia coli
BL21(DE3)]
gi|253323535|gb|ACT28137.1| DNA repair protein RecN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974486|gb|ACT40157.1| recombination and repair protein [Escherichia coli B str. REL606]
gi|253978653|gb|ACT44323.1| recombination and repair protein [Escherichia coli BL21(DE3)]
gi|310333083|gb|EFQ00297.1| DNA repair protein RecN [Escherichia coli 1827-70]
gi|323960526|gb|EGB56155.1| DNA repair protein RecN [Escherichia coli H489]
gi|323971441|gb|EGB66677.1| DNA repair protein RecN [Escherichia coli TA007]
Length = 553
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|1033112|gb|AAA79786.1| CG Site No. 10872; alternate name radB; a frame- shift error in
GenBank Accession Number Y00357 changes the C-terminal
end of the gene [Escherichia coli str. K-12 substr.
MG1655]
Length = 553
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|157157277|ref|YP_001463935.1| recombination and repair protein [Escherichia coli E24377A]
gi|157079307|gb|ABV19015.1| DNA repair protein RecN [Escherichia coli E24377A]
Length = 553
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|213582900|ref|ZP_03364726.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 488
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 233 LLADGEDVNL 242
>gi|170033699|ref|XP_001844714.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874682|gb|EDS38065.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 890
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 5/50 (10%), Positives = 20/50 (40%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQL 86
+++ +++ + D A+ + ++++ AE ++L
Sbjct: 652 VEAEKLKREQEEEAARQAKAEAERKKRDQEAEIERQKAEQERMEAEKRKL 701
>gi|169612323|ref|XP_001799579.1| hypothetical protein SNOG_09281 [Phaeosphaeria nodorum SN15]
gi|160702482|gb|EAT83473.2| hypothetical protein SNOG_09281 [Phaeosphaeria nodorum SN15]
Length = 1422
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 6/141 (4%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
R + A + + ++ E + + + R
Sbjct: 790 TRRQKQAADAEAQRQREQAELARRAEQQRIEAEQQRQRLQEEERNRQLR---EAQQAQMR 846
Query: 100 ENFFKNLFRIGNILGFQ---KEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKP 156
E + + G+Q + M D+ + ++ +Q ++ D K++
Sbjct: 847 EQEERLARQHALDNGYQTLAENVMFDVNEGLMIQFVENLIQTTAAQVIAADRQEKLQKLR 906
Query: 157 FVNITTNKAKNHRRITSQEKA 177
A H+R ++A
Sbjct: 907 EKQEAVADAMAHQRTLRLQRA 927
>gi|331654072|ref|ZP_08355072.1| DNA repair protein RecN [Escherichia coli M718]
gi|331047454|gb|EGI19531.1| DNA repair protein RecN [Escherichia coli M718]
Length = 553
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|82545159|ref|YP_409106.1| recombination and repair protein [Shigella boydii Sb227]
gi|81246570|gb|ABB67278.1| protein used in recombination and DNA repair [Shigella boydii
Sb227]
Length = 553
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|24113953|ref|NP_708463.1| recombination and repair protein [Shigella flexneri 2a str. 301]
gi|30064014|ref|NP_838185.1| recombination and repair protein [Shigella flexneri 2a str. 2457T]
gi|110806717|ref|YP_690237.1| recombination and repair protein [Shigella flexneri 5 str. 8401]
gi|24053062|gb|AAN44170.1| DNA repair protein RecN [Shigella flexneri 2a str. 301]
gi|30042270|gb|AAP17995.1| DNA repair protein RecN [Shigella flexneri 2a str. 2457T]
gi|110616265|gb|ABF04932.1| DNA repair protein recN [Shigella flexneri 5 str. 8401]
gi|281602025|gb|ADA75009.1| DNA repair protein RecN [Shigella flexneri 2002017]
gi|313648294|gb|EFS12738.1| DNA repair protein RecN [Shigella flexneri 2a str. 2457T]
gi|332753362|gb|EGJ83742.1| DNA repair protein RecN [Shigella flexneri 4343-70]
gi|332754041|gb|EGJ84413.1| DNA repair protein RecN [Shigella flexneri K-671]
gi|332755600|gb|EGJ85963.1| DNA repair protein RecN [Shigella flexneri 2747-71]
gi|332765594|gb|EGJ95807.1| DNA repair protein RecN [Shigella flexneri 2930-71]
gi|332999391|gb|EGK18976.1| DNA repair protein RecN [Shigella flexneri VA-6]
gi|333000789|gb|EGK20363.1| DNA repair protein RecN [Shigella flexneri K-218]
gi|333000988|gb|EGK20558.1| DNA repair protein RecN [Shigella flexneri K-272]
gi|333015508|gb|EGK34847.1| DNA repair protein RecN [Shigella flexneri K-227]
gi|333015814|gb|EGK35150.1| DNA repair protein RecN [Shigella flexneri K-304]
Length = 553
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|190341577|gb|ACE74865.1| RecN [Escherichia hermannii]
Length = 553
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQVLIQIHGQHAHQLLLKPEHQRTLLD--GYAGEYALTQQMAQHYRQWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
++ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LAAHQQQSQERTARAELLQYQLKELNEFAPQPGEYEQIDAEYKRLANSGQLLSTGQQALQ 232
Query: 122 DITD 125
ITD
Sbjct: 233 LITD 236
>gi|317049194|ref|YP_004116842.1| DNA repair protein RecN [Pantoea sp. At-9b]
gi|316950811|gb|ADU70286.1| DNA repair protein RecN [Pantoea sp. At-9b]
Length = 553
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 6/140 (4%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y + + + ++ R
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLLKPDHQKHLLD--AYAAHDDVLAQMRIHYQRWHQSCRA 172
Query: 63 PDNIAKELDS-EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ E + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LAQHQQLSQEREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRLANSGQLLSTSQQALQ 232
Query: 122 DITDH---RLLSLAYYAQIG 138
+ D + SL Y A+
Sbjct: 233 ILADSDDTNMQSLLYSARQM 252
>gi|219125980|ref|XP_002183246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405521|gb|EEC45464.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 4825
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 47/181 (25%), Gaps = 11/181 (6%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ L A AQ + + + E P+ R +Q + E +
Sbjct: 3343 KQSKAQLNTKIAAEAQRVKETRSEQKAKQQEAELPQKISRELPSQQNSKQQNAQKAEEAK 3402
Query: 62 NPDN---IAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
K E E ++++ + + + L +
Sbjct: 3403 RARKLVSEQKGKQQEAQLAHKAEEAKRVQEIL----SGQKAKQHKLELVEKAVEAKHVHD 3458
Query: 119 EMV-DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKA 177
R LA A + Q + K +++ + + R+ EKA
Sbjct: 3459 IRSEQQVKQRKFELAQKA---AEEQDQRNLDKSGMEDKRREKLSSEQKEKQRKGQKAEKA 3515
Query: 178 I 178
Sbjct: 3516 K 3516
>gi|15602474|ref|NP_245546.1| cell division protein MukB [Pasteurella multocida subsp. multocida
str. Pm70]
gi|41017403|sp|Q9CN36|MUKB_PASMU RecName: Full=Chromosome partition protein mukB; AltName:
Full=Structural maintenance of chromosome-related protein
gi|12720881|gb|AAK02693.1| MukB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 1495
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 27/76 (35%)
Query: 15 LAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEI 74
+ Q + ++ PE Y R++ ++A++ + ++ +
Sbjct: 938 IRQYGATLSQLEPIANTLQSDPEHYERLKADYEQAISQQKQVQQRLFALADVLQRKAHFA 997
Query: 75 LEKKLIAENQQLEHLF 90
E+++ EN L
Sbjct: 998 YEERVQTENTDLNEQL 1013
>gi|301118604|ref|XP_002907030.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108379|gb|EEY66431.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 6248
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 10/110 (9%), Positives = 25/110 (22%), Gaps = 14/110 (12%)
Query: 46 RQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKN 105
V + + +E+ ++ E +L+
Sbjct: 5162 WDAIQRKQEEAVRALQERKQQQERERAELQQQVAQQEMNRLQE--------EHERELRAL 5213
Query: 106 LFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHK 155
+ Q+E++ A+ Q ++ S A
Sbjct: 5214 TASLAQEQTRQEEKLQQRI------AQRRARKQRQEEEASAKAQQHSADA 5257
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 19/90 (21%), Gaps = 10/90 (11%)
Query: 2 QNQAKILA--QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVET 59
+ + LA Q A Q I + + + ET +
Sbjct: 4796 ERARQELALKQRLNARRQRIRASGGNATDQD--SSDAETAIEQEAEV------AQAELAD 4847
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEHL 89
+ + + ++
Sbjct: 4848 QERVARQQLAERQQQELSVVARQLEKEAEA 4877
>gi|254673626|emb|CBA09169.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha275]
Length = 1545
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 30/182 (16%)
Query: 9 AQSAEALAQLINHH----IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
+Q+ AQ+ P + R + ++ + R
Sbjct: 995 SQAQTDSAQIAKPQNIVVAPPSPQANQAE----EAKRQQAKAEQVKRQQAEAEKVARQKA 1050
Query: 65 NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT 124
AK + ++ E Q+LE ++ Q E+
Sbjct: 1051 KEAKRQQDALARQQAEQERQRLE--------AERQAAEIAKQKAEAEEAKRQAAEL---- 1098
Query: 125 DHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQT 184
A+ +++K +E A + + K + E A QK +
Sbjct: 1099 ----------ARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREAAELAKQKAEEE 1148
Query: 185 GS 186
G
Sbjct: 1149 GR 1150
>gi|328865997|gb|EGG14383.1| type A von Willebrand factor domain-containing protein
[Dictyostelium fasciculatum]
Length = 923
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 3/45 (6%), Positives = 20/45 (44%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQ 85
+++ +++ I ++ + + ++L ++ L + ++
Sbjct: 671 QLKEQQEREQKIKEQQLKEQQEREQKIRDLQQAKEQQLLKEQQER 715
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 16 AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEIL 75
Q + + +++ +++ +++ I + + +E + +I
Sbjct: 669 EQQLKEQQERE--QKIKEQ------QLKEQQEREQKIRDLQQAKEQQLLKEQQEREQKIR 720
Query: 76 EKKLIAENQQLEH 88
+++ I E + L
Sbjct: 721 DQQAIREKELLLS 733
>gi|321470558|gb|EFX81534.1| hypothetical protein DAPPUDRAFT_347174 [Daphnia pulex]
Length = 1890
Score = 38.1 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
Q +A+ +AQ E AQ + + L++ Q+A E +
Sbjct: 668 QREAQRVAQRME--AQEMARQAQE---AKLQQR-----MERERALQEAKEARRQMREQEK 717
Query: 62 NPDNIAKELDSEILEKKLIAENQQ 85
A+ + E+ ++L+ ++
Sbjct: 718 LERQEAQRKERELRTQQLMEARKK 741
>gi|145538688|ref|XP_001455044.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422832|emb|CAK87647.1| unnamed protein product [Paramecium tetraurelia]
Length = 5873
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 20/80 (25%), Gaps = 12/80 (15%)
Query: 41 RIRYLRQKALN---IINHFVETGRNPDNIAKELDSEI------LEKKLIAENQQLEHLFP 91
R + +K + E ++ D E +K + + L+ P
Sbjct: 5271 RHKLRMEKQKEMELKLQKEYEEQLRLQQDQQKEDEEQNFELHPQKKDIQNQQFPLKENAP 5330
Query: 92 Q---TKDPAQRENFFKNLFR 108
+ P +
Sbjct: 5331 EDIVMIQPDIEPEELMKIRE 5350
>gi|47213005|emb|CAF95397.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2594
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPT-LEKTYPETYHRIRYLRQKALNIINHFVET 59
+QN ++ ++ + + + L HR L+ + +
Sbjct: 516 LQNVPQVPSEQEDRKERSFQTQPQEQEVQAHLRAEQELQAHRQEELQAHRQQELQAHRQE 575
Query: 60 GRNPDNIAKELDSEILEKKLIAENQ 84
+ + + L+ E Q
Sbjct: 576 LQAHRQQELQAHRQELQAHRQQELQ 600
Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ QA Q +A Q + + HR + L+ + + +
Sbjct: 622 ELQAHR-QQELQAHRQEELQAHRQEELQAHRQE--LQAHRQQELQAHRQQELQAHRQELQ 678
Query: 62 NPDNIAKELDSEILEKKLIA 81
+ + L+
Sbjct: 679 AHRQELQAHRQQELQAHRQE 698
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHF-VETG 60
+ QA Q +A Q + + HR + L+ + E
Sbjct: 590 ELQAHR-QQELQAHRQQELQAHRQEELQAHRQQE-LQAHRQQELQAHRQEELQAHRQEEL 647
Query: 61 RNPDNIAKELDSEILEKKLIAENQ 84
+ + + L+ E Q
Sbjct: 648 QAHRQELQAHRQQELQAHRQQELQ 671
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 22/83 (26%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
Q + + Q +A Q + + + + + + H E +
Sbjct: 581 QQELQAHRQELQAHRQQELQAHRQQELQAHRQEELQAHRQQELQAHRQQELQAHRQEELQ 640
Query: 62 NPDNIAKELDSEILEKKLIAENQ 84
+ + L+ E Q
Sbjct: 641 AHRQEELQAHRQELQAHRQQELQ 663
>gi|238759664|ref|ZP_04620824.1| DNA repair protein recN [Yersinia aldovae ATCC 35236]
gi|238702092|gb|EEP94649.1| DNA repair protein recN [Yersinia aldovae ATCC 35236]
Length = 553
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L + + ++ R
Sbjct: 115 SQLRELGQQLIQIHGQHAHQLLLKPEHQKHLLD--AYADQSALLAEMKAAYQTWHQSCRA 172
Query: 63 PD-NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + L+ + L + ++L PQ + Q + +K L G +L ++ +
Sbjct: 173 LALHQQQSLERNARRELLQYQLKELNSFAPQVGEYEQIDAEYKRLANSGQLLSLSQQTLQ 232
Query: 122 DITD 125
++D
Sbjct: 233 LLSD 236
>gi|297516515|ref|ZP_06934901.1| recombination and repair protein [Escherichia coli OP50]
Length = 522
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 84 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 141
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 142 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 201
Query: 122 DITD 125
+ D
Sbjct: 202 LMAD 205
>gi|160887519|ref|ZP_02068522.1| hypothetical protein BACOVA_05538 [Bacteroides ovatus ATCC 8483]
gi|156107930|gb|EDO09675.1| hypothetical protein BACOVA_05538 [Bacteroides ovatus ATCC 8483]
Length = 422
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 40 HRIRYLR-QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R ++ + +E + E E+ L N ++E+ K+
Sbjct: 142 IRQREKHMEETIARYQTEMEELQKSRKEIIRQAKEEAERMLQESNARIENTIRTIKEAQA 201
Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
+ + + + + + A+ + ++ E +K
Sbjct: 202 EKEKTRQARQELTDFRTSLDALASKEHEEKI-----AKKMEKLKEKQERKKNKKSEPKAA 256
Query: 159 NITTNKAKN 167
+ + A
Sbjct: 257 VSSPSSAPK 265
>gi|47215228|emb|CAF96726.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1547
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 6/131 (4%)
Query: 7 ILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNI 66
+ + L + P S+ L R RQ+ ++ + +ET
Sbjct: 49 QVESLKKELEENQQLLAPTPSAEQLSDQNAAELQRHLAERQQEISHVQEVLETKVQLLQQ 108
Query: 67 AKELDSEILEKKL------IAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
EL + Q LE + + ++ + L +
Sbjct: 109 EAELARAEAQHMASLADSEAQRRQALERELVEKTEESKDQGLKDRLMEELREQKHDLDLQ 168
Query: 121 VDITDHRLLSL 131
V+ R+L L
Sbjct: 169 VEELRARVLRL 179
>gi|315045776|ref|XP_003172263.1| hypothetical protein MGYG_04851 [Arthroderma gypseum CBS 118893]
gi|311342649|gb|EFR01852.1| hypothetical protein MGYG_04851 [Arthroderma gypseum CBS 118893]
Length = 1465
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + LE E R + Q L + V
Sbjct: 1025 EEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRRQEEELAREKEAAQARLKALEEQVR 1084
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1085 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1144
Query: 119 E 119
E
Sbjct: 1145 E 1145
>gi|145517204|ref|XP_001444485.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411907|emb|CAK77088.1| unnamed protein product [Paramecium tetraurelia]
Length = 1998
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 7/82 (8%), Positives = 18/82 (21%), Gaps = 6/82 (7%)
Query: 16 AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEIL 75
A+ I L + + L + + K+
Sbjct: 1691 AKRIQEEQKKQ--EELRIQQELEQKKKDEDLNQLLEEQKLQEQKEQEMLQRQKQSRQAAD 1748
Query: 76 E----KKLIAENQQLEHLFPQT 93
+ + E + L+ +
Sbjct: 1749 QNSEIDVMQNEIEDLKQEINEF 1770
>gi|327304677|ref|XP_003237030.1| actin cytoskeleton-regulatory complex protein PAN1 [Trichophyton
rubrum CBS 118892]
gi|326460028|gb|EGD85481.1| actin cytoskeleton-regulatory complex protein PAN1 [Trichophyton
rubrum CBS 118892]
Length = 1467
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + LE E R + Q L + V
Sbjct: 1016 EEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRKQEEELAREKEAAQARLKALEEQVR 1075
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1076 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1135
Query: 119 E 119
E
Sbjct: 1136 E 1136
>gi|238793398|ref|ZP_04637024.1| Uncharacterized mscS family protein [Yersinia intermedia ATCC
29909]
gi|238727367|gb|EEQ18895.1| Uncharacterized mscS family protein [Yersinia intermedia ATCC
29909]
Length = 1121
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 49/183 (26%), Gaps = 9/183 (4%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYL-RQKALNIINHFVETGRN 62
QA+ AEA+A+ + L + R+R +K ++ +++ RN
Sbjct: 185 QAQFALLQAEAVAR--KAKANELELSQLSANNRQELSRLRAELYKKRQERVDAQLQSLRN 242
Query: 63 P---DNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF-QKE 118
+ + L + L K+ + L + + +
Sbjct: 243 NLNNQRQQAAEQALERTELLAEQGGDLPESI--IKELQTNRELSQALNQQAQRIDLISSQ 300
Query: 119 EMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
+ + + + A A + + + +
Sbjct: 301 QRQAVAQTQQVRQALSTIREQAQWLGVSTALGETLRAQVARLPEVPKSQQLDRDMAQLRV 360
Query: 179 QKL 181
Q+L
Sbjct: 361 QRL 363
>gi|300949011|ref|ZP_07163064.1| DNA repair protein RecN [Escherichia coli MS 116-1]
gi|300957401|ref|ZP_07169615.1| DNA repair protein RecN [Escherichia coli MS 175-1]
gi|300315836|gb|EFJ65620.1| DNA repair protein RecN [Escherichia coli MS 175-1]
gi|300451538|gb|EFK15158.1| DNA repair protein RecN [Escherichia coli MS 116-1]
Length = 553
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +V
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALV 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|332712134|ref|ZP_08432062.1| hypothetical protein LYNGBM3L_72990 [Lyngbya majuscula 3L]
gi|332348940|gb|EGJ28552.1| hypothetical protein LYNGBM3L_72990 [Lyngbya majuscula 3L]
Length = 292
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 15/53 (28%), Gaps = 3/53 (5%)
Query: 41 RIRYLR--QKALNIINHFVETGRNPDNI-AKELDSEILEKKLIAENQQLEHLF 90
R R + Q+A + + + + ++ QQL
Sbjct: 230 RQRAEQERQRAEQEYQRAEQEHQRAEQEHQRAEQERQQKELAQQRAQQLAERL 282
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 6/93 (6%), Positives = 21/93 (22%), Gaps = 8/93 (8%)
Query: 28 SPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLE 87
++ + A++ ++ AE ++
Sbjct: 208 WLRWYDQDGNWIATNAERTEQERQRAEQERQRAEQEYQRAEQEHQRAEQEHQRAEQER-- 265
Query: 88 HLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
+ + + L +G +E+
Sbjct: 266 ------QQKELAQQRAQQLAERLRQMGINPDEI 292
>gi|153007024|ref|YP_001381349.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152030597|gb|ABS28365.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 893
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 34/126 (26%), Gaps = 5/126 (3%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
Q +I Q + + H L + E + R++ +I + +
Sbjct: 438 QLEIERQGLQREQDEASRHRLGQVEKELAQLN-EEFTRLKSRWDAEKAVIQEIAQAKQEI 496
Query: 64 DNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIG----NILGFQKEE 119
D + ++ E + P+ + + + EE
Sbjct: 497 DALKQQQAQAEREANFQKAAEIKFGRLPELQRAVGELHEKLAQLQSAGGPMLREEVTPEE 556
Query: 120 MVDITD 125
+ ++
Sbjct: 557 IAEVVS 562
>gi|189234024|ref|XP_973053.2| PREDICTED: similar to kinesin family member 21 [Tribolium
castaneum]
Length = 1019
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 13/189 (6%), Positives = 54/189 (28%), Gaps = 12/189 (6%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q + K + + + + P D ++ Y + QK L + +
Sbjct: 590 LQTRIKNTQEERDKILHSYSAREPSDKIKKIKD----EYTKKLSDMQKELKKLQAAQKEH 645
Query: 61 RNPDNIAKELDSEILEKK-----LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ ++++ K + +L + + + + + I +
Sbjct: 646 ARLLRSQSQHENQLKSYKNELLEMKRAKVKLINKMKEESQKHKESELRR-MREIAQLRKE 704
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
+++ I + + ++ K + + + + +
Sbjct: 705 SRKKANMIKTMEAERQLKDKVL--KRKQEEVSVLRKNQKVYLSTKAAGRLREAFSERAAK 762
Query: 176 KAIQKLYQT 184
+ ++ ++
Sbjct: 763 QKWLRMEKS 771
>gi|270014744|gb|EFA11192.1| hypothetical protein TcasGA2_TC004800 [Tribolium castaneum]
Length = 1018
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 13/189 (6%), Positives = 54/189 (28%), Gaps = 12/189 (6%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q + K + + + + P D ++ Y + QK L + +
Sbjct: 590 LQTRIKNTQEERDKILHSYSAREPSDKIKKIKD----EYTKKLSDMQKELKKLQAAQKEH 645
Query: 61 RNPDNIAKELDSEILEKK-----LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ ++++ K + +L + + + + + I +
Sbjct: 646 ARLLRSQSQHENQLKSYKNELLEMKRAKVKLINKMKEESQKHKESELRR-MREIAQLRKE 704
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
+++ I + + ++ K + + + + +
Sbjct: 705 SRKKANMIKTMEAERQLKDKVL--KRKQEEVSVLRKNQKVYLSTKAAGRLREAFSERAAK 762
Query: 176 KAIQKLYQT 184
+ ++ ++
Sbjct: 763 QKWLRMEKS 771
>gi|300930658|ref|ZP_07146045.1| DNA repair protein RecN [Escherichia coli MS 187-1]
gi|300461478|gb|EFK24971.1| DNA repair protein RecN [Escherichia coli MS 187-1]
Length = 553
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L ++ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLKEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|170592268|ref|XP_001900891.1| Prion-like- [Brugia malayi]
gi|158591758|gb|EDP30362.1| Prion-like-, putative [Brugia malayi]
Length = 2225
Score = 37.3 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 29/108 (26%), Gaps = 16/108 (14%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYL--RQKALNIINHFVET 59
+ +A L Q + L + L + E R++ R+ A +
Sbjct: 191 EREAARLQQQQDELLRQKA--------EALARQQQEEAARLKQEELRRIAYQKEQQLKQQ 242
Query: 60 GRNP------DNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
E E + + E ++ ++ R+
Sbjct: 243 REAHEKLRLEQQRILEEQKRQEETRKLEEQRKEMEKVRAIREQQNRKQ 290
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 32 EKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFP 91
+ + R + IA + + ++ +++ E +LE
Sbjct: 197 LQQQQDELLRQKAEALARQQQEEAARLKQEELRRIAYQKEQQLKQQREAHEKLRLEQQ-- 254
Query: 92 QTKDPAQRENFFKNLFR 108
+ + +R+ + L
Sbjct: 255 RILEEQKRQEETRKLEE 271
>gi|270265317|ref|ZP_06193578.1| hypothetical protein SOD_m00490 [Serratia odorifera 4Rx13]
gi|270040721|gb|EFA13824.1| hypothetical protein SOD_m00490 [Serratia odorifera 4Rx13]
Length = 553
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + + Y L + + ++ R
Sbjct: 115 SQLRELGQCLIQIHGQHAHQLLLKPEHQKQLLD--AYADEPALLAQMQQAYQRWHQSCRE 172
Query: 63 PD-NIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + L+ + ++ L + ++L PQ + Q ++ +K L G +L ++ +
Sbjct: 173 LAHHQQQSLERDARKQLLQYQLKELNEFAPQAGEFEQTDSEYKRLANSGQLLTLSQQTLQ 232
Query: 122 DITD---HRLLSLAYYA 135
+ D H +LS Y A
Sbjct: 233 LLADDEEHNMLSQLYTA 249
>gi|198475024|ref|XP_001356898.2| GA10292 [Drosophila pseudoobscura pseudoobscura]
gi|198138644|gb|EAL33964.2| GA10292 [Drosophila pseudoobscura pseudoobscura]
Length = 1804
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNP 63
+ + L Q + + + + + P L + P+T L+ + + I
Sbjct: 277 RRQELQQPTQTIEEPQPRLVRQEPQPRLMREEPQTRMVREELQTRLVKDIQQQQSRLARE 336
Query: 64 DNI---AKELDSEILEKKLIAENQQ 85
+E + L+ LI E +Q
Sbjct: 337 QQQPRLIREEQQQQLQPTLIREEKQ 361
>gi|241176305|ref|XP_002399529.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
gi|215495156|gb|EEC04797.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
Length = 1095
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 7/70 (10%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEIL----EKKLIAENQQL-EHLFPQTKD 95
IR +++ + + + K+ + ++ + +L FP+ K
Sbjct: 836 EIRRKQEEEREALRRKISEEQRILEEQKQEQERAMIMKRQEFVEKSKSKLQFADFPEDKP 895
Query: 96 PAQRENFFKN 105
+ +
Sbjct: 896 GKKSKGRKSQ 905
>gi|124006960|ref|ZP_01691789.1| serine/threonine kinase with GAF domain [Microscilla marina ATCC
23134]
gi|123987413|gb|EAY27133.1| serine/threonine kinase with GAF domain [Microscilla marina ATCC
23134]
Length = 1131
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 15/181 (8%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
+ AQ+ + S + E ++ + + E ++
Sbjct: 641 EVENKTAQIEEQKKQIEKSLEEKTEQTEMLLAQEEEMRQNMEELQATQEAMSEKQRELEK 700
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
+KKL Q L+ + + + + + L Q+EE+ + L
Sbjct: 701 A-----KKKLEVNEQVLKKAY------KKARDRELEIKQKNEELKAQEEEIRQ--NMEEL 747
Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYD 189
A + Q E A K+ V + ++K + + Q+ L D
Sbjct: 748 KATQEAM--ERKQIEIEGANKKLAANEKVLKLAYEQVKESESEIRKKNEEIVKQSQILED 805
Query: 190 S 190
+
Sbjct: 806 A 806
>gi|326669076|ref|XP_003198928.1| PREDICTED: hypothetical protein LOC100535263 [Danio rerio]
Length = 703
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 10/97 (10%), Positives = 26/97 (26%), Gaps = 8/97 (8%)
Query: 4 QAKILAQSAEALAQL-INHHIPDDSSPTLEKTYPETYHR----IRYLRQKALNIINHFVE 58
+ Q + +L + L + + Y Q+ + +
Sbjct: 502 RRNRHHQQKRIMEKLWMQKDQQKKRRLKLNEEDQQEYLEELRSQEEQHQELQKDLQDEMR 561
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKD 95
I +E ++ L ++ +Q +D
Sbjct: 562 LLNEAAEIQEEERRLEFQEFLRSQEEQEREF---WQD 595
>gi|326477318|gb|EGE01328.1| hypothetical protein TEQG_00381 [Trichophyton equinum CBS 127.97]
Length = 1477
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + LE E R + Q L + V
Sbjct: 1026 EEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRRQEEELAREKEAAQTRLKALEEQVR 1085
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1086 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1145
Query: 119 E 119
E
Sbjct: 1146 E 1146
>gi|307168149|gb|EFN61428.1| hypothetical protein EAG_10804 [Camponotus floridanus]
Length = 1417
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 18/47 (38%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLE 87
R R + Q+ + + +ELD + ++K + +L
Sbjct: 552 RERLVEQERQQKLEIERQQQEELKKRQEELDQLLQQEKEEEQAARLA 598
>gi|194857954|ref|XP_001969069.1| GG24159 [Drosophila erecta]
gi|190660936|gb|EDV58128.1| GG24159 [Drosophila erecta]
Length = 4031
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 8/109 (7%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPET---YH-RIRYLRQKALNIINHFVETG 60
A+ E Q+ P + +P + P+ Y ++ + N V
Sbjct: 231 AQQEHIEVEENQQVNLKDEPIEKNPQEAQHDPKESEPYVLQLEKAMEFVENAHQQHVAAV 290
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEH---LFPQ-TKDPAQRENFFKN 105
++ + ++ ++ E + + PQ DP ++E
Sbjct: 291 QSYQKQRDTEQNAQQQEHILQETTEAQQQHIAVPQILGDPKKKEEELAQ 339
>gi|213423454|ref|ZP_03356436.1| recombination and repair protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 255
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H +Y L Q+ + ++ R+
Sbjct: 114 SQLRELGQLLIQIHGQHTHQQLTKPEQQKSLLD--SYANEAALAQQMAAHYQLWHQSCRD 171
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ + L + ++L PQ + Q + +K L G +L + +
Sbjct: 172 LAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALA 231
Query: 122 DITDHRLLSL 131
+ D ++L
Sbjct: 232 LLADGEDVNL 241
>gi|190341511|gb|ACE74832.1| RecN [Enterobacter cowanii]
Length = 541
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 10/141 (7%)
Query: 3 NQAKILAQSAEALAQLINHH--IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+Q + L Q + H I + TL Y L Q+ + ++
Sbjct: 103 SQLRELGQLLIQIHGQHAHQLLIKSEHQKTLLD----GYAGEYVLTQQMAERYRAWHQSC 158
Query: 61 RNPDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
R ++ + L + ++L PQ + Q + +K L G +L +
Sbjct: 159 RELAQHQQQSQERAARAELLHYQLKELNEFSPQPGEFEQIDEEYKRLANSGQLLSTSQHA 218
Query: 120 MVDITDHRLLSL---AYYAQI 137
+ + D ++L Y A+
Sbjct: 219 LNVLADGEDVNLQSQLYSARQ 239
>gi|39970965|ref|XP_366873.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15]
gi|149210495|ref|XP_001522622.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15]
gi|86196677|gb|EAQ71315.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15]
gi|145017219|gb|EDK01582.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15]
Length = 1043
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 48/191 (25%), Gaps = 3/191 (1%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
Q QA++LAQ Q L + + R + N+
Sbjct: 333 QEQAQMLAQQQFEQQQRALAEQQQREHQALLEQQARMATQGRLAELEQENLRARAQYEQD 392
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + LE +L L D + + L + +
Sbjct: 393 QLMLQQYDQRVKALEGELQHIQSSLGQQMNSKDDQIRA--LQEQLNTWRSKYEALAKLYS 450
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKL 181
+ H L L + +++A K T N K
Sbjct: 451 QL-RHEHLDLLQKFKSVQLKAASAQEAIEKREKLEREIKTKNLELADMIRERDRALHDKD 509
Query: 182 YQTGSLYDSLE 192
+GS D +E
Sbjct: 510 RLSGSQKDEVE 520
>gi|315047706|ref|XP_003173228.1| hypothetical protein MGYG_09099 [Arthroderma gypseum CBS 118893]
gi|311343614|gb|EFR02817.1| hypothetical protein MGYG_09099 [Arthroderma gypseum CBS 118893]
Length = 1130
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/151 (5%), Positives = 42/151 (27%), Gaps = 12/151 (7%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
++ + V+ + + ++ E + ++ + +
Sbjct: 720 TLKQDLGRLEQEYRTAVQHLQRQKQMLAIHKNQEHELFVESQKA-----------EDKAD 768
Query: 101 NFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNI 160
++ N G + + + + + ++A K++
Sbjct: 769 ELKDSIDDDRNQDGRLEALTSAMKEAEEEMKLHE-RSFEDCVNAKDEATAKVKEIKRELA 827
Query: 161 TTNKAKNHRRITSQEKAIQKLYQTGSLYDSL 191
+ + +++ + L ++ + +L
Sbjct: 828 AKDAEISSVSENTRKAETELLRKSNKRHAAL 858
>gi|332371431|dbj|BAK22385.1| glucan-binding protein C [Streptococcus ratti]
Length = 595
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/174 (7%), Positives = 41/174 (23%), Gaps = 9/174 (5%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+ + +A+A + Y+ + + + + +
Sbjct: 118 DNKAQAQKINQAVADYDKAKTQYAQDQKQYQQDLADYNTQKSEYDAKKKAYDDYQQQVAS 177
Query: 63 PDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFK-NLFRIGNILGFQKEE-- 119
+ ++ L + + D A R ++ N + E
Sbjct: 178 GQGAGRVEKAQGLIFESEPKATVTIQGVTDYLDKAARAAHQADDILEQFNTDKYTDSEFT 237
Query: 120 MVDITDHRLLSLAYY------AQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
+ + D + A S + + + ++ K+
Sbjct: 238 LNNPYDPNEDTWFKMAVGDTIAVTYENIVNSSYNKQKISKVVTTYKLNSSTNKD 291
>gi|327403531|ref|YP_004344369.1| hypothetical protein Fluta_1538 [Fluviicola taffensis DSM 16823]
gi|327319039|gb|AEA43531.1| hypothetical protein Fluta_1538 [Fluviicola taffensis DSM 16823]
Length = 1115
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 23/196 (11%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDD------SSPTLEKTYPETYHRIRYL-----RQKA 49
+ Q + L + E + +L+ + D+ L + + + +
Sbjct: 575 LSEQDEELLKQQELIEELLKEVMDDELKKLLDDLEKLMEKNDQQQMKNETEKLDASSDEM 634
Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
++ +E + K D E +L AE ++LE KD E
Sbjct: 635 KKQLDRTMEMLKRLQVNEKIDDLEKELDQLAAEQEKLEKDI---KDEKVSEKDASKKQEE 691
Query: 110 GN----ILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKA 165
N L +EM + + ++ +D ++++ K+
Sbjct: 692 LNKKFDDLKKDMQEMQKLNEE-----LDRPMPMDSFEQEQQDISNEMKDAKSKLDQGKKS 746
Query: 166 KNHRRITSQEKAIQKL 181
K + +++L
Sbjct: 747 KAGENQKKASEKMKEL 762
>gi|332839675|ref|XP_003313813.1| PREDICTED: kinesin family member 21A isoform 3 [Pan troglodytes]
Length = 1347
Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 50/200 (25%), Gaps = 21/200 (10%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPE--------TYHRIRYL--RQKAL 50
++N K L + + + L + +Y + R +
Sbjct: 651 LENSQKRLQTLKKQYEEKLMMLQHKIRDTQL-ERDQVLQNLGSVESYSEEKAKKVRSEYE 709
Query: 51 NIINHFVETGRNPDNIAKELDSEIL-EKKLIAENQQLEHLFPQTKDPAQR-------ENF 102
+ + + KE + + + + ++L+ + K R E
Sbjct: 710 KKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKEEQE 769
Query: 103 FKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT 162
L + + R ++ + + + T
Sbjct: 770 KARLTESRRNREIAQ--LKKDQRKRDVTALRRQVRPMSDKVAGKVTRKLSSSDAPAQDTG 827
Query: 163 NKAKNHRRITSQEKAIQKLY 182
+ A S+ A QK+
Sbjct: 828 SSAAAVETDASRTGAQQKMR 847
>gi|326472985|gb|EGD96994.1| actin cytoskeleton-regulatory complex protein PAN1 [Trichophyton
tonsurans CBS 112818]
Length = 1467
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT---YPETYHRIRYLRQKALNIINHFVE 58
+ I A+ + A + + LE E R + Q L + V
Sbjct: 1021 EEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRRQEEELAREKEAAQTRLKALEEQVR 1080
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
G+ K + ++ E + + + L +G+ +
Sbjct: 1081 QGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDD 1140
Query: 119 E 119
E
Sbjct: 1141 E 1141
>gi|291224819|ref|XP_002732400.1| PREDICTED: Spectrin beta chain, putative-like [Saccoglossus
kowalevskii]
Length = 4257
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Query: 38 TYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPA 97
+ + + QK + I K ILE++ + +++ + +
Sbjct: 3561 EFEKQKESEQKRKQE-EKERKEQDRLQLIRKREQERILEERRKEQERKMMM---EEEAKR 3616
Query: 98 QRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
+RE K + +KE+ + +HR + + + + K E HK
Sbjct: 3617 KREAEQKKIAAKIEEERLKKEQEMKEREHRQVEMERKIEEEQKKLKRHEVKTHKKEDNTR 3676
Query: 158 VN 159
Sbjct: 3677 TR 3678
>gi|254411452|ref|ZP_05025229.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196181953|gb|EDX76940.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 292
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 18/72 (25%), Gaps = 6/72 (8%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
R ++ + +E ++ E+Q+ E +
Sbjct: 222 EERAQLERQRAEQERQRAEQERQRAEQERQRAEQERQRAEQEHQRAEQA------EQKSA 275
Query: 101 NFFKNLFRIGNI 112
+ L +G
Sbjct: 276 RLAERLRAMGID 287
>gi|149639596|ref|XP_001512551.1| PREDICTED: similar to bromodomain adjacent to zinc finger domain, 2B
[Ornithorhynchus anatinus]
Length = 2461
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 22/188 (11%), Positives = 59/188 (31%), Gaps = 24/188 (12%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 991 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 1050
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 1051 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1103
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + + NK + + +
Sbjct: 1104 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRL----NKERKLEQRRLEL 1154
Query: 176 KAIQKLYQ 183
+ ++L +
Sbjct: 1155 EMAKELKK 1162
>gi|315253143|gb|EFU33111.1| putative DNA repair protein RecN [Escherichia coli MS 85-1]
Length = 368
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + Y L Q+ + ++ R+
Sbjct: 115 SQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLD--GYANETSLLQEMTARYQLWHQSCRD 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ + + L + ++L PQ + Q + +K L G +L + +
Sbjct: 173 LAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALA 232
Query: 122 DITD 125
+ D
Sbjct: 233 LMAD 236
>gi|33413774|gb|AAN39445.1| normocyte binding protein 2a [Plasmodium falciparum]
Length = 3081
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 14 ALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG---RNPDNIAKEL 70
AL + + + L++ E R + + + + + ++
Sbjct: 2739 ALKRQEQERLQKE--EELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQE 2796
Query: 71 DSEILEKKLIAENQQLEHLFPQTKDPAQ--RENFFKNLFRIGNI 112
+ E+ E ++LE + + Q + ++ +I
Sbjct: 2797 RLQKEEELKRQEQERLERKKIELAEREQHIKSKLESDMVKIIKD 2840
>gi|326665578|ref|XP_002661089.2| PREDICTED: hypothetical protein LOC100331068 [Danio rerio]
Length = 1604
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/161 (6%), Positives = 41/161 (25%), Gaps = 45/161 (27%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIIN----HFV 57
+ Q Q E + + I++ E+ + ++ + +
Sbjct: 1426 KQQRAEYHQRIEEMKREIDNQRSQYEQQQKERED--EDRKREEKYRQDQEKMRNDQERII 1483
Query: 58 ETGRNPDNIAKELDS----------------------------EILEKKLIAENQQLEHL 89
+ + + +++++ + +
Sbjct: 1484 AEVQRKQEEEIKKRELEKKRRNEEEEGERQRWERRIKEAENDRKEIQEEIKRQQR----- 1538
Query: 90 FPQTKDP----AQRENFFKNLFRIGNILGFQKEEMVDITDH 126
+ +D ++E + L + Q+E + + H
Sbjct: 1539 --EWEDEMKRREKKEQLIQELQQKLEERQKQQELLEKLYQH 1577
>gi|189065488|dbj|BAG35327.1| unnamed protein product [Homo sapiens]
Length = 640
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 5/78 (6%), Positives = 21/78 (26%), Gaps = 7/78 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
E L + + + ++ ++ E ++A + +
Sbjct: 473 EVLQNFLQSQVVVE--ESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQM 530
Query: 68 KELDSEILEKKLIAENQQ 85
E ++ + ++
Sbjct: 531 MEAQERSFQEYMAQMEKK 548
>gi|145483429|ref|XP_001427737.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394820|emb|CAK60339.1| unnamed protein product [Paramecium tetraurelia]
Length = 1113
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/149 (6%), Positives = 40/149 (26%), Gaps = 8/149 (5%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
Q + + I + E + +N + + ++
Sbjct: 4 QKESEIQKDIKQQLYQVPQEEELNADYEELMKA--------QNLNKQWQQMKQEAEYQEQ 55
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
+ + +K+ E ++L + + + + + I +++ ++ +
Sbjct: 56 VIQKRKLQKIEEEQKRLATKLEELINQPSFDEYEEKHKLIALKRRIEQDYKDEVDKLKEQ 115
Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
L + + + I +
Sbjct: 116 FLLAKEFDVEKIVRKKIEMEKLIEAQKKK 144
>gi|303322673|ref|XP_003071328.1| CAP-Gly domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111030|gb|EER29183.1| CAP-Gly domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|320032932|gb|EFW14882.1| dynactin [Coccidioides posadasii str. Silveira]
Length = 1349
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSP-TLEKTYPETYHRIRYLRQKALNIINHFVET 59
M+ + L ++ L + D S + E Y ++ + +
Sbjct: 441 MERTNERLREALIRLRDMTQQQEADLKSQIKELEEDLEGYAALKARYESTKEQLTVTEAN 500
Query: 60 GRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTK 94
+ L +E + ++L +N Q + + K
Sbjct: 501 MEELKQQVEALGAEEMIEELSEKNMQYQEQISELK 535
>gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex]
Length = 1195
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 40/152 (26%), Gaps = 12/152 (7%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
R R L ++ + E +E + E + + ++L L + + ++
Sbjct: 836 ARARSLAEEEKRMRKKQEEEREAFRTKQREEQHRLEESRRQEQ-EKLLKLREEFIEKTKK 894
Query: 100 ENFFKNL-----FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH 154
F + + + +E +TD K
Sbjct: 895 ATQFNEMPSEKAEKGKKSRKKKDDEDGFVTDGS------DRIQSGDEGAGPPSKKRKAER 948
Query: 155 KPFVNITTNKAKNHRRITSQEKAIQKLYQTGS 186
KP T ++ K +K G
Sbjct: 949 KPRQTETKSRKKGKSGEERGRTKEKKGRSEGR 980
>gi|118388522|ref|XP_001027358.1| hypothetical protein TTHERM_00683220 [Tetrahymena thermophila]
gi|89309128|gb|EAS07116.1| hypothetical protein TTHERM_00683220 [Tetrahymena thermophila
SB210]
Length = 793
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 31/104 (29%), Gaps = 13/104 (12%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
Q+ K Q+ Q N + + N++ E
Sbjct: 559 QDGKKEKKQTKNQGDQKQNQEKQFEEWKK----------QQLKEYDNWQNLVAQQKEEQL 608
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKN 105
++ + L++++ E ++L+ + D + + +
Sbjct: 609 QLSTKQQDEWQK-LQQQIEEEQKKLKSKQAE--DQEKLKQKQND 649
>gi|37725922|gb|AAO38039.1| reticulocyte binding-like protein 2b [Plasmodium reichenowi]
Length = 3427
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 18/61 (29%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
++ Q+ + E R +L E K+ E Q + K Q +
Sbjct: 2783 ELKRQEQEKQAQLQKEEELKRQEQEKQAQLQKEEELKRQEQEKQAQLQKEEELKRQEQEK 2842
Query: 101 N 101
Sbjct: 2843 Q 2843
>gi|31377634|ref|NP_443173.2| guanylate-binding protein 4 [Homo sapiens]
gi|116242487|sp|Q96PP9|GBP4_HUMAN RecName: Full=Guanylate-binding protein 4; AltName:
Full=GTP-binding protein 4; Short=GBP-4; AltName:
Full=Guanine nucleotide-binding protein 4
gi|30268272|emb|CAD89936.1| hypothetical protein [Homo sapiens]
Length = 640
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 5/78 (6%), Positives = 21/78 (26%), Gaps = 7/78 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
E L + + + ++ ++ E ++A + +
Sbjct: 473 EVLQNFLQSQVVVE--ESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQM 530
Query: 68 KELDSEILEKKLIAENQQ 85
E ++ + ++
Sbjct: 531 MEAQERSFQEYMAQMEKK 548
>gi|114557621|ref|XP_001149060.1| PREDICTED: guanylate binding protein 4 isoform 1 [Pan troglodytes]
gi|114557623|ref|XP_001149136.1| PREDICTED: guanylate-binding protein 4 isoform 2 [Pan troglodytes]
Length = 640
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 5/78 (6%), Positives = 21/78 (26%), Gaps = 7/78 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
E L + + + ++ ++ E ++A + +
Sbjct: 473 EVLQNFLQSQVVVE--ESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQM 530
Query: 68 KELDSEILEKKLIAENQQ 85
E ++ + ++
Sbjct: 531 MEAQERSFQEYMAQMEKK 548
>gi|332221846|ref|XP_003260074.1| PREDICTED: guanylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332221848|ref|XP_003260075.1| PREDICTED: guanylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
Length = 640
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 5/78 (6%), Positives = 21/78 (26%), Gaps = 7/78 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
E L + + + ++ ++ E ++A + +
Sbjct: 473 EVLQNFLQSQVVVE--ESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQM 530
Query: 68 KELDSEILEKKLIAENQQ 85
E ++ + ++
Sbjct: 531 MEAQERSFQEYMAQMEKK 548
>gi|299747241|ref|XP_002911146.1| hypothetical protein CC1G_14578 [Coprinopsis cinerea okayama7#130]
gi|298407430|gb|EFI27652.1| hypothetical protein CC1G_14578 [Coprinopsis cinerea okayama7#130]
Length = 1932
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 49/178 (27%), Gaps = 41/178 (23%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+++A++LA+ +L L + R ++ ++ A +
Sbjct: 1128 EDKARLLAEKLAMQTKLQQAEAL------LAEEKARQAAREKHAQKLAEEEKLKIEAERK 1181
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
K+ ++ ++ AE Q+ + + E K +
Sbjct: 1182 EMQQAIKDAQEQL--ARIEAEAQKAVGE-----EKKKLEAEIKAMKA------------- 1221
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
++ + + A R +P V T + T + +
Sbjct: 1222 ---------------QHDKTLEAYKTAKDSKRKEPKVKETKPRPTKDEEATPRPRRQS 1264
>gi|195448509|ref|XP_002071689.1| GK10116 [Drosophila willistoni]
gi|194167774|gb|EDW82675.1| GK10116 [Drosophila willistoni]
Length = 1733
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 40/178 (22%), Gaps = 11/178 (6%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNI--- 66
Q+ + +AQ S L + + RQ A +
Sbjct: 559 QARQQMAQNPMMMQQRQMSEDLARQQAAQNPMMMQQRQMAEEQARQQMSQNPMMMQQRQM 618
Query: 67 ------AKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
+ + + +Q P Q + ++
Sbjct: 619 AEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQA--RQQAAQNPMMMQQR 676
Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAI 178
D +A + Q Q + A + P + A+ R + +
Sbjct: 677 QMAEDQARQQMAQNPMMMQQRQMAEDLARQQAAQNPMMMQQRQMAEEQARQQMAQNPM 734
>gi|164429189|ref|XP_962210.2| hypothetical protein NCU05211 [Neurospora crassa OR74A]
gi|157072975|gb|EAA32974.2| predicted protein [Neurospora crassa OR74A]
Length = 1539
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 38 TYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEIL----EKKLIAENQQLEHLFPQ 92
Y + + + L + +E +E+ E++ + +L PQ
Sbjct: 902 QYAKTYAKQNEKLEKMREKEAEKARLFQQEQERQAEMERRAAEQREQEQQHKLTKARPQ 960
>gi|33413778|gb|AAN39448.1| normocyte binding protein 2b [Plasmodium falciparum]
Length = 3256
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 31/87 (35%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
R +++ + + +E + E + + +Q + + ++ + E
Sbjct: 2741 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPEI 2800
Query: 102 FFKNLFRIGNILGFQKEEMVDITDHRL 128
+ L + IL + ++++ +
Sbjct: 2801 INEALVKGDKILEGSDQRNMELSKPNV 2827
>gi|13345189|gb|AAK19245.1|AF312917_1 reticulocyte binding protein 2 homolog B [Plasmodium falciparum]
gi|15072329|gb|AAG02259.1| reticulocyte binding protein analog [Plasmodium falciparum]
gi|33413784|gb|AAN39447.1| normocyte binding protein 2b [Plasmodium falciparum]
Length = 3254
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 31/87 (35%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
R +++ + + +E + E + + +Q + + ++ + E
Sbjct: 2739 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPEI 2798
Query: 102 FFKNLFRIGNILGFQKEEMVDITDHRL 128
+ L + IL + ++++ +
Sbjct: 2799 INEALVKGDKILEGSDQRNMELSKPNV 2825
>gi|270002460|gb|EEZ98907.1| hypothetical protein TcasGA2_TC004526 [Tribolium castaneum]
Length = 2187
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 16/123 (13%)
Query: 54 NHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTK---DPAQRENFFKNLFRIG 110
+ + + +E + +K + + Q+ +H P + P E K +
Sbjct: 568 DREKQERDREEKERQEQALKNHFEKSLRQAQKRDHWNPIRQPQPRPNSSEEERKRV---- 623
Query: 111 NILGFQKEEMVDITDHRLLSLA--YYAQIGLQSQKLSEDAYHKIR-HKPFVNITTNKAKN 167
++E+ D R L++ + + + K P + +K
Sbjct: 624 ------EQEIHQRGDARHLAVRSERDHRAYYTTSQRPPSVPTKTEYPPPPAHSRVPTSKP 677
Query: 168 HRR 170
+
Sbjct: 678 SEK 680
>gi|156538281|ref|XP_001603300.1| PREDICTED: similar to GA10623-PA [Nasonia vitripennis]
Length = 2101
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRI--RYLRQKALNIINHFVETGRN 62
A+ +A+ E L D + Y + + Q+ E +N
Sbjct: 733 AQEVARRLEEL--RAAGGFRDIRMNNQYERDKLAYAKKLAKEEAQRHKEQARLIKEQEKN 790
Query: 63 PDNIAKELDSEILEKKLIAENQQLEHLF 90
A + E+ ++L+ E ++
Sbjct: 791 ERQEAVRRERELRNQQLLEERERRRQHM 818
>gi|332530751|ref|ZP_08406679.1| SMC domain protein [Hylemonella gracilis ATCC 19624]
gi|332039784|gb|EGI76182.1| SMC domain protein [Hylemonella gracilis ATCC 19624]
Length = 938
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 44/161 (27%), Gaps = 9/161 (5%)
Query: 39 YHRIRYLRQKALNIINHFVETGRNPDNIAKELDSE-----ILEKKLIAENQQLEHLFPQT 93
Y R +++ + + +L++ + KL Q + P
Sbjct: 195 YEEARQHQRQLSEEVEAAQRELTHGQAQLAQLEARANLYRQHQAKLREREQLATEIIPVL 254
Query: 94 KDPAQRENFFKNLFRIGNILGFQKEEMVDITDH-RLLSLAYYAQIGLQSQKLSEDAYHKI 152
+R+ L + Q E D+ R L A AQ + Q
Sbjct: 255 AWAEERQELAGKLRELHRQRLNQAGEARQRADYKRRLLEALQAQQTAEQQVGLLKTQRDE 314
Query: 153 RHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
+ + + ++ + G D+ ++
Sbjct: 315 AQATLDEARAAEKPVEQLLKQAQELQELAAVEG---DAAQL 352
>gi|326426627|gb|EGD72197.1| hypothetical protein PTSG_00219 [Salpingoeca sp. ATCC 50818]
Length = 2117
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 43/178 (24%), Gaps = 24/178 (13%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEK-TYPETYHRIRYLRQKALNIINHFVETGR 61
+A L + + + L + PE R R L ++ +
Sbjct: 504 RRAIELRKRRQQAEREHKAEKQ----RLLAEGQNPEEVFRRRKLERER--------AKQQ 551
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
KE + + ++ E K E L + G + M
Sbjct: 552 QRAQREKEKQEQSIAARIAQEMS--------WKRSEVGERT-AKLRQTAI--GTTMKTMQ 600
Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQ 179
+ A + L+ ++ + K+ + + Q
Sbjct: 601 ATSGAVAGRFEAEAALQLKMEQQQQRGAGGAGAGAGKQRVGPNHKSSKASKVALASAQ 658
>gi|257877014|ref|ZP_05656667.1| peptidase M23B [Enterococcus casseliflavus EC20]
gi|257811180|gb|EEV40000.1| peptidase M23B [Enterococcus casseliflavus EC20]
Length = 340
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+ +++ + AL H + +L P+ + + + +
Sbjct: 70 LAQESQEVQTQIAALNDQKAQHQESQAPSSLVVDGPQATIQQLRKFSEQQAALREVNQQL 129
Query: 61 RNPDNIAKE--LDSEILEKKLIAENQQLEHL 89
+ + + + +L+ +QL
Sbjct: 130 AEKEAQQQRITSYQTLTQAQLVHSKEQLATA 160
>gi|296005458|ref|XP_002809051.1| reticulocyte binding protein 2, homolog b [Plasmodium falciparum 3D7]
gi|308191562|sp|C0H5F4|RBP2B_PLAF7 RecName: Full=Reticulocyte binding protein 2 homolog b
gi|225631993|emb|CAX64332.1| reticulocyte binding protein 2, homolog b [Plasmodium falciparum 3D7]
Length = 3179
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 31/87 (35%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
R +++ + + +E + E + + +Q + + ++ + E
Sbjct: 2664 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPEI 2723
Query: 102 FFKNLFRIGNILGFQKEEMVDITDHRL 128
+ L + IL + ++++ +
Sbjct: 2724 INEALVKGDKILEGSDQRNMELSKPNV 2750
>gi|260949863|ref|XP_002619228.1| hypothetical protein CLUG_00387 [Clavispora lusitaniae ATCC 42720]
gi|238846800|gb|EEQ36264.1| hypothetical protein CLUG_00387 [Clavispora lusitaniae ATCC 42720]
Length = 879
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 21/82 (25%), Gaps = 3/82 (3%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG-- 60
+ L + E + + EK E + + ++KA E
Sbjct: 629 QMREGLTRQLEEIQEQAAQEKAAQEKAEQEKAEQEQAAQEKAEQEKAEQDAQEKAEQEKS 688
Query: 61 -RNPDNIAKELDSEILEKKLIA 81
+ + ++ L
Sbjct: 689 EQENLEQENLEQENLEQENLEQ 710
>gi|257866938|ref|ZP_05646591.1| predicted protein [Enterococcus casseliflavus EC30]
gi|257873271|ref|ZP_05652924.1| predicted protein [Enterococcus casseliflavus EC10]
gi|257800994|gb|EEV29924.1| predicted protein [Enterococcus casseliflavus EC30]
gi|257807435|gb|EEV36257.1| predicted protein [Enterococcus casseliflavus EC10]
Length = 358
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
+ +++ + AL H + +L P+ + + + +
Sbjct: 88 LAQESQEVQTQIAALNDQKAQHQESQAPSSLVVDGPQATIQQLRKFSEQQAALREVNQQL 147
Query: 61 RNPDNIAKE--LDSEILEKKLIAENQQLEHL 89
+ + + + +L+ +QL
Sbjct: 148 AEKEAQQQRITSYQTLTQAQLVHSKEQLATA 178
>gi|114557625|ref|XP_513545.2| PREDICTED: guanylate binding protein 4 isoform 3 [Pan troglodytes]
Length = 607
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 5/78 (6%), Positives = 21/78 (26%), Gaps = 7/78 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
E L + + + ++ ++ E ++A + +
Sbjct: 440 EVLQNFLQSQVVVE--ESILQSDKALTAGEKAIAAERAMKEAAEKEQELLREKQKEQQQM 497
Query: 68 KELDSEILEKKLIAENQQ 85
E ++ + ++
Sbjct: 498 MEAQERSFQEYMAQMEKK 515
>gi|332532411|ref|ZP_08408289.1| translation initiation factor 2 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038054|gb|EGI74501.1| translation initiation factor 2 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 886
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 9/117 (7%), Positives = 22/117 (18%), Gaps = 3/117 (2%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
+ ++ E + K K ++ + +
Sbjct: 98 KKSAMEQEQEQARLAAEEKARLEQQQKAEQEAAELKAKQEAERKAKEEADRKAKEE--AK 155
Query: 102 FFKNLFRIGNILGFQKEE-MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
+ R E+ D +K E+A +
Sbjct: 156 RKADAERKAKQKQMTPEQSAKSEKDRIEAERLQKEAEEAALKKAEEEAKRQAEEARK 212
>gi|238784784|ref|ZP_04628786.1| Uncharacterized mscS family protein [Yersinia bercovieri ATCC
43970]
gi|238714297|gb|EEQ06307.1| Uncharacterized mscS family protein [Yersinia bercovieri ATCC
43970]
Length = 1107
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/168 (7%), Positives = 39/168 (23%), Gaps = 7/168 (4%)
Query: 20 NHHIPDDSSPTLEKTYPETYHRIRYL-RQKALNIINHFVETGRNP---DNIAKELDSEIL 75
+ L + R+R +K ++ ++ RN +
Sbjct: 187 KAKANELELSQLSANNRQELSRLRAELYKKRQERVDTQLQALRNTLNNQRQQAAEQALER 246
Query: 76 EKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF-QKEEMVDITDHRLLSLAYY 134
+ L + L + + L + + ++ ++ + + A
Sbjct: 247 TELLAEQGGDLPESI--IQQLQINRELSQALNQQAQRIDLISSQQRQAVSQTQQVRQALS 304
Query: 135 AQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLY 182
A + + + +Q+L
Sbjct: 305 TIREQAQWLGVSTALGEALRAQVARLPDVPKSQQLDRDMAQLRVQRLQ 352
>gi|157371921|ref|YP_001479910.1| recombination and repair protein [Serratia proteamaculans 568]
gi|157323685|gb|ABV42782.1| DNA repair protein RecN [Serratia proteamaculans 568]
Length = 553
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+Q + L Q + H + + Y L + + ++ R
Sbjct: 115 SQLRELGQRLIQIHGQHAHQLLLKPEHQKQLLD--AYADEPALLTQMQQAYQRWHQSCRE 172
Query: 63 PDNIAKELDSE-ILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
+ ++ ++ L + ++L PQ + Q + FK L G +L ++ +
Sbjct: 173 LAHHQQQSIERDARKQLLQYQLKELNEFAPQAGEFEQIDTEFKRLANSGQLLTISQQTLQ 232
Query: 122 DITDHRLLSLA 132
+ D+ ++
Sbjct: 233 LLADNEENNML 243
>gi|198471370|ref|XP_002133724.1| GA22639 [Drosophila pseudoobscura pseudoobscura]
gi|198145888|gb|EDY72351.1| GA22639 [Drosophila pseudoobscura pseudoobscura]
Length = 734
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/178 (10%), Positives = 54/178 (30%), Gaps = 16/178 (8%)
Query: 16 AQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN--PDNIAKELDSE 73
A+L P+ P + R R + +++ E R +
Sbjct: 391 AELKRRQQPEAPDPEPLNERQQQAMRERAELDQHKQLVSECRERRRQSHLKKELAGNLKK 450
Query: 74 ILEKKLIAENQQLEHLFPQ----------TKDPAQRENFFKNLFRIGNILGFQKEEMVDI 123
++K+ +L + P+ P + ++ R + ++
Sbjct: 451 QRQEKVAPCR-KLAKVVPESDYEEEDVPLWSVPHRDSQASLSVQRSMVKADVDP--LNEL 507
Query: 124 TDHR-LLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
+ R A + +S+ +DA + + +++ + + + +++
Sbjct: 508 IERRNEFEQHSQAMLFPESEDEEKDAPSPSILRRSNQPSPQRSEANADVDDLNELLER 565
>gi|315223245|ref|ZP_07865106.1| putative cross-wall-targeting lipoprotein signal [Streptococcus
anginosus F0211]
gi|315187677|gb|EFU21431.1| putative cross-wall-targeting lipoprotein signal [Streptococcus
anginosus F0211]
Length = 1276
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 55/199 (27%), Gaps = 22/199 (11%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKT------YPETYHRIRYLRQKALNIINH 55
++ AQ+ +A+ Q+ + + +T P + +++
Sbjct: 182 DKASQQAAQTNQAVEQVKAKIKAEFPDAKVTETTKEIKVDPT-----KTSYDAYTKVVDQ 236
Query: 56 FVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + ++ ++ AE + + + +
Sbjct: 237 VKAENKKATETYQAEKAKENQEI--AETKAYNEAVRKRNSENKAKVE-------AENAEI 287
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQS--QKLSEDAYHKIRHKPFVNITTNKAKNHRRITS 173
K + + + A + Q + +I NK+++ R
Sbjct: 288 AKRNQAQLAHKKSVEAENEAIKKRNAAGQAKVDAENKEIDKFNKEVAEFNKSEDERVAKE 347
Query: 174 QEKAIQKLYQTGSLYDSLE 192
+ +A + G + D +
Sbjct: 348 KAEAKANSAKDGYVKDIVS 366
>gi|194761032|ref|XP_001962736.1| GF15601 [Drosophila ananassae]
gi|190616433|gb|EDV31957.1| GF15601 [Drosophila ananassae]
Length = 1175
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 18/56 (32%)
Query: 36 PETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFP 91
P ++ +I + + + E+ L ++Q +H+ P
Sbjct: 313 PVQAQTQAADQEYKQKLIQKHEQFVAKQYEKQQHKVRQQHEEFLAKQHQIKQHILP 368
>gi|254414886|ref|ZP_05028650.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC
7420]
gi|196178375|gb|EDX73375.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC
7420]
Length = 292
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 7/83 (8%), Positives = 22/83 (26%), Gaps = 3/83 (3%)
Query: 39 YHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
+ + +++ + +E ++ E Q+ + + + Q
Sbjct: 213 WSSEQAEQERQRAEQERQRAEQERQRAEQERQRAEQERQRAEQERQRADAVT---NNLEQ 269
Query: 99 RENFFKNLFRIGNILGFQKEEMV 121
+ L LG +
Sbjct: 270 ERQRNQALIAKLQELGIDPNTLS 292
>gi|260914018|ref|ZP_05920491.1| cell division protein [Pasteurella dagmatis ATCC 43325]
gi|260631651|gb|EEX49829.1| cell division protein [Pasteurella dagmatis ATCC 43325]
Length = 1495
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 25/59 (42%)
Query: 32 EKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
++ PE Y R++ ++A++ + ++ + E+++ +E +L
Sbjct: 955 LQSDPENYERLKADYEQAISQQKQVQQRLFALADVVQRKPHFAYEERVQSETSELNEQL 1013
>gi|322490526|emb|CBZ25787.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 2655
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 21/71 (29%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
+R +A + A++ + + + A Q L+ +D A R
Sbjct: 1032 AEEAAIRAQAEQERQAAHAESQRLVREAEQRAEQRIHEARDAAEQLLQAQLADLRDEAVR 1091
Query: 100 ENFFKNLFRIG 110
+ +
Sbjct: 1092 RAEHAAVMQAL 1102
>gi|189234161|ref|XP_967052.2| PREDICTED: similar to jumonji domain containing 1A [Tribolium
castaneum]
Length = 1914
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 16/123 (13%)
Query: 54 NHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTK---DPAQRENFFKNLFRIG 110
+ + + +E + +K + + Q+ +H P + P E K +
Sbjct: 288 DREKQERDREEKERQEQALKNHFEKSLRQAQKRDHWNPIRQPQPRPNSSEEERKRV---- 343
Query: 111 NILGFQKEEMVDITDHRLLSLA--YYAQIGLQSQKLSEDAYHKIR-HKPFVNITTNKAKN 167
++E+ D R L++ + + + K P + +K
Sbjct: 344 ------EQEIHQRGDARHLAVRSERDHRAYYTTSQRPPSVPTKTEYPPPPAHSRVPTSKP 397
Query: 168 HRR 170
+
Sbjct: 398 SEK 400
>gi|307154569|ref|YP_003889953.1| hypothetical protein Cyan7822_4775 [Cyanothece sp. PCC 7822]
gi|306984797|gb|ADN16678.1| protein of unknown function DUF820 [Cyanothece sp. PCC 7822]
Length = 278
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 17/53 (32%)
Query: 36 PETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
PE Y + R ++ H + + +E + +L + L
Sbjct: 203 PEEYQKQRAEQEHQRAEQEHQRAEQEHQRAEQEHQRAEQSQFQLQQIVKNLLQ 255
>gi|326436855|gb|EGD82425.1| hypothetical protein PTSG_03069 [Salpingoeca sp. ATCC 50818]
Length = 1346
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD 64
A LA + A L IP+ +P ++ + + R ++ +
Sbjct: 781 AHALAARLDHNASL----IPEPPTPGEARSPHQVHVHRRQQLEQLREQYRQWELEQLREQ 836
Query: 65 NIAKELDSEILEKKLIA 81
+EL+ + KL
Sbjct: 837 QRQRELEQHQ-QAKLQQ 852
>gi|71996161|ref|NP_001022955.1| hypothetical protein Y79H2A.3 [Caenorhabditis elegans]
Length = 2129
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 3/92 (3%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQT-KDPAQR 99
+ Q+A I+ + + ++ + KL AE L +P K P
Sbjct: 1129 AAKLAAQEAKKDISLKSRLEQASMQQRERQKIDVQQAKLEAERILLLSKYPNFGKGPTAA 1188
Query: 100 ENFFKNLFRIGNILGFQKEEMVDITDHRLLSL 131
+ + + + + +
Sbjct: 1189 AATRPQV--TAKQVPLNPYGVSSFGVAQAIIV 1218
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 18/186 (9%), Positives = 53/186 (28%), Gaps = 15/186 (8%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHR----IRYLRQKALNIINHFV 57
QA+ +A+ A + + + + +K + +
Sbjct: 867 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQMKMLKQQ----- 921
Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
E + I E + + + ++ E + + +R + + +L Q+
Sbjct: 922 EKIKRIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEAEKRTKEKELRRQQAVLLKHQE 981
Query: 118 EEMVDIT----DHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITS 173
E + R + A + + E + R + +N + +
Sbjct: 982 LERHRLDMERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEM 1041
Query: 174 QEKAIQ 179
++ +
Sbjct: 1042 AKELKK 1047
>gi|122890900|emb|CAM13237.1| novel protein similar to vertebrate misshapen-like kinase 1 (MINK1)
[Danio rerio]
Length = 1270
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 19/114 (16%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRI-----RYLRQKALNIINH 55
+Q + K +++ + + PE + R + ++
Sbjct: 358 LQQENKERSEALKRQQAQLAAQR----------RDPEEHKRQLLHDRQKRIEEQKEQRRR 407
Query: 56 FVETGRN----PDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKN 105
E R + L+ E+++L + K E
Sbjct: 408 LEEQQRKEREMVRQQQDKAPHRRLDDMRREEDRRLAEREQEYKRKQLEEQRQSE 461
>gi|195064631|ref|XP_001996600.1| GH23310 [Drosophila grimshawi]
gi|193899812|gb|EDV98678.1| GH23310 [Drosophila grimshawi]
Length = 1093
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 7/146 (4%)
Query: 44 YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFP--QTKDPAQR-- 99
+ + + A+ + L+ L ++ + L P + +P
Sbjct: 475 ADEDEDQDQGEREQQQLLCSTCDAQFEQGKQLQAHLSEQHGICKLLVPKREPSEPMVSIP 534
Query: 100 --ENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
K++ L + D L++ A + + + S + P
Sbjct: 535 CDGASSKSMPVPAVELPETPPPEKETADKDDLAMIS-AMVAEITAERSPKVKKMVIKLPV 593
Query: 158 VNITTNKAKNHRRITSQEKAIQKLYQ 183
K + QE+ +++ Q
Sbjct: 594 GKRGGRTRKTKEQKPKQEQQLEQAKQ 619
>gi|311274398|ref|XP_001925905.2| PREDICTED: kinesin family member 16B [Sus scrofa]
Length = 1361
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 30/92 (32%), Gaps = 5/92 (5%)
Query: 17 QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILE 76
Q + + +S + + + L+++ + +E + +L
Sbjct: 749 QEELQRLQELNSHEKAEKDQI-FRELDQLKREKEEQYAKLELEKQRL--EEQEKEQVLLV 805
Query: 77 KKLIAENQQLEHLFPQTKDPAQ--RENFFKNL 106
L + ++ + + P + E ++L
Sbjct: 806 AHLEEQLREKQEMIPPLRHGEVQRAEEERQDL 837
>gi|163943348|ref|YP_001642578.1| 1A family penicillin-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|163865545|gb|ABY46603.1| penicillin-binding protein, 1A family [Bacillus weihenstephanensis
KBAB4]
Length = 794
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 7/85 (8%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+NQ + + Q D + +++ + + + ++ N
Sbjct: 706 KNQQEQKQSEQDKNQQEQKQSGQDKNQQEQKQSGQDKNQQEQKQGEQDKNQQEQKQSEQD 765
Query: 62 NPDNIAKE-LDSEILEKKLIAENQQ 85
K+ + +++ E +
Sbjct: 766 KNQQEQKQGEQDKNQQEQKQGEQDK 790
>gi|126326221|ref|XP_001366439.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain
protein 2B (hWALp4) [Monodelphis domestica]
Length = 2180
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 900 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 959
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 960 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1012
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1013 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1067
Query: 176 KAIQ 179
+ +
Sbjct: 1068 ELKK 1071
>gi|218234366|ref|YP_002366871.1| excalibur domain family [Bacillus cereus B4264]
gi|218162323|gb|ACK62315.1| excalibur domain family [Bacillus cereus B4264]
Length = 287
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 3/75 (4%), Positives = 19/75 (25%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
+ + + + + + +++A E + +
Sbjct: 152 TQKQEDEKRLAEEQARKQEDEKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQAR 211
Query: 70 LDSEILEKKLIAENQ 84
E +++ + +
Sbjct: 212 KQQEEQKRQADEQAR 226
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 8/118 (6%), Positives = 30/118 (25%), Gaps = 4/118 (3%)
Query: 23 IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE 82
+ L + + +++A E + + E +++ +
Sbjct: 153 QKQEDEKRLAEE---QARKQEDEKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQ 209
Query: 83 NQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT-DHRLLSLAYYAQIGL 139
++ + + D R+ + + + + A A +
Sbjct: 210 ARKQQEEQKRQADEQARKQQEEQKTQQAQTQPASGNTSSAYYKNCAAVRAAGKAPLYK 267
>gi|124487063|ref|NP_001074852.1| histone-lysine N-methyltransferase MLL3 [Mus musculus]
Length = 4904
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 5/69 (7%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Query: 19 INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78
N + P + +++ + + + + L+++
Sbjct: 3370 ANPQNGPPPRVEFDDNNPFS----ESFQERERKERLREQQERQRVQLMQEVDRQRALQQR 3425
Query: 79 LIAENQQLE 87
+ E L
Sbjct: 3426 MEMEQHCLM 3434
>gi|37999865|sp|Q8BRH4|MLL3_MOUSE RecName: Full=Histone-lysine N-methyltransferase MLL3; AltName:
Full=Myeloid/lymphoid or mixed-lineage leukemia protein 3
homolog
Length = 4903
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 5/69 (7%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Query: 19 INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78
N + P + +++ + + + + L+++
Sbjct: 3369 ANPQNGPPPRVEFDDNNPFS----ESFQERERKERLREQQERQRVQLMQEVDRQRALQQR 3424
Query: 79 LIAENQQLE 87
+ E L
Sbjct: 3425 MEMEQHCLM 3433
>gi|159475230|ref|XP_001695726.1| hypothetical protein CHLREDRAFT_149876 [Chlamydomonas reinhardtii]
gi|158275737|gb|EDP01513.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1971
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
R R + + + + + KE ++L E ++ + + + A+RE
Sbjct: 1161 RARQVLAEDQAELARIERERQEAERARKEALERERLERLKQEQERQKR---EKAEAAERE 1217
Query: 101 NFFKNLFRIGNI 112
Sbjct: 1218 RLQAEKREKAKA 1229
>gi|148671129|gb|EDL03076.1| mCG113864 [Mus musculus]
Length = 4532
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 5/69 (7%), Positives = 18/69 (26%), Gaps = 4/69 (5%)
Query: 19 INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78
N + P + +++ + + + + L+++
Sbjct: 2947 ANPQNGPPPRVEFDDNNPFS----ESFQERERKERLREQQERQRVQLMQEVDRQRALQQR 3002
Query: 79 LIAENQQLE 87
+ E L
Sbjct: 3003 MEMEQHCLM 3011
>gi|153869210|ref|ZP_01998873.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
gi|152074257|gb|EDN71132.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
Length = 1134
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 37/125 (29%), Gaps = 3/125 (2%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
QS E AQ ++ + +++ ++ + +E
Sbjct: 323 QSEELKAQQEEMQQVNEELQDQREQLQHKQAELKHNNEELQSQTEELQSQSEELQTQQEE 382
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQR-ENFFKNLFRIGNILGFQKEEMVDITDHRL 128
+ ++L ++LE + E + + L + E+ + ++
Sbjct: 383 --LKQTNEELEERTKELERQKTDMQQKNFALEQTQVEMQKTQVALETKANELELASRYKS 440
Query: 129 LSLAY 133
LA
Sbjct: 441 EFLAN 445
>gi|157124490|ref|XP_001654071.1| 26S protease (S4) regulatory subunit, putative [Aedes aegypti]
gi|108873962|gb|EAT38187.1| 26S protease (S4) regulatory subunit, putative [Aedes aegypti]
Length = 594
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 5/70 (7%), Positives = 16/70 (22%), Gaps = 8/70 (11%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
R ++ L E + + + + E + ++ + +
Sbjct: 140 ARKRYEEQLAQQQRVQEENLRKQEESVAKQEAMRRQTIEHEM--------ELREKNKMKL 191
Query: 102 FFKNLFRIGN 111
L
Sbjct: 192 LEAELRAKAK 201
>gi|332814679|ref|XP_525949.3| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
troglodytes]
Length = 2217
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 887 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 946
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 947 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 999
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1000 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1054
Query: 176 KAIQ 179
+ +
Sbjct: 1055 ELKK 1058
>gi|229150407|ref|ZP_04278624.1| Excalibur domain protein [Bacillus cereus m1550]
gi|228633104|gb|EEK89716.1| Excalibur domain protein [Bacillus cereus m1550]
Length = 289
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 3/75 (4%), Positives = 19/75 (25%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
+ + + + + + +++A E + +
Sbjct: 154 TQKQEDEKRLAEEQARKQEDEKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQAR 213
Query: 70 LDSEILEKKLIAENQ 84
E +++ + +
Sbjct: 214 KQQEEQKRQADEQAR 228
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 8/118 (6%), Positives = 30/118 (25%), Gaps = 4/118 (3%)
Query: 23 IPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE 82
+ L + + +++A E + + E +++ +
Sbjct: 155 QKQEDEKRLAEE---QARKQEDEKRQADEQARKQQEEQKRQADEQARKQQEEQKRQADEQ 211
Query: 83 NQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT-DHRLLSLAYYAQIGL 139
++ + + D R+ + + + + A A +
Sbjct: 212 ARKQQEEQKRQADEQARKQQEEQKAQQAQTQPASGNTSSAYYKNCAAVRAAGKAPLYK 269
>gi|156036336|ref|XP_001586279.1| hypothetical protein SS1G_12857 [Sclerotinia sclerotiorum 1980]
gi|154698262|gb|EDN98000.1| hypothetical protein SS1G_12857 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1322
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 14/45 (31%), Gaps = 3/45 (6%)
Query: 43 RYLRQKALN-IINHFVETGRNPDNIAKEL--DSEILEKKLIAENQ 84
R +Q+A N + E + + + ++Q
Sbjct: 1171 RLQQQQAENIRLQQQQAENIRLQQQQAEQSRRQQQQTEHIRRQSQ 1215
>gi|94482823|gb|ABF22439.1| coiled-coil transcriptional coactivator [Takifugu rubripes]
Length = 654
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 11/96 (11%)
Query: 5 AKILAQ--SAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
L Q E L + +++ + Y R R + + + + +
Sbjct: 139 RAELLQNRLQECLQERAELLQAHEATNRQREKDKLEYKRAREAWDRRRSEVESDISRLQR 198
Query: 63 PDN---------IAKELDSEILEKKLIAENQQLEHL 89
K+ + + L + L E L
Sbjct: 199 ELKHSHEQIKSMERKQEEEQDLVELLTQEKSTLLEA 234
>gi|146084685|ref|XP_001465074.1| hypothetical protein [Leishmania infantum JPCM5]
Length = 1237
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 21/71 (29%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
+R +A + A++ + + + A Q L+ +D A R
Sbjct: 1030 AEEAAIRAQAEQERQAAHAESQRLLQEAEQRAEQRIREARDAAEQLLQAQLADLRDEAVR 1089
Query: 100 ENFFKNLFRIG 110
+ +
Sbjct: 1090 RAEHAAVMQAL 1100
>gi|307169034|gb|EFN61879.1| Bromodomain adjacent to zinc finger domain protein 2B [Camponotus
floridanus]
Length = 2352
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 40/136 (29%), Gaps = 22/136 (16%)
Query: 4 QAKILAQSAEALA---QLINHHIPDDSSPTLEKTYPETYHRI--RYLRQKALNIINHFVE 58
A+ +A+ E L + + + + Y + + + I E
Sbjct: 703 SAQEVARKLEELKATSSFRDGRMNNQ-----YERDKLAYAKKIAKEEALRHKEQIRLIKE 757
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL------FRIGNI 112
+ A + EI ++L+ ++L Q+ + + +
Sbjct: 758 QEKTERQEAVRREREIRTQQLLEGRKRLAFTI------KQKMKIIQEIERGKSKSDVARE 811
Query: 113 LGFQKEEMVDITDHRL 128
LG + I +R
Sbjct: 812 LGLASSTVATIWKNRE 827
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 890 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 949
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 950 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1002
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1003 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1057
Query: 176 KAIQ 179
+ +
Sbjct: 1058 ELKK 1061
>gi|73662995|ref|YP_301776.1| hypothetical protein SSP1686 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495510|dbj|BAE18831.1| hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 375
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 5/53 (9%), Positives = 16/53 (30%)
Query: 33 KTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQ 85
+ + R +A + A+ ++ L+++ E +
Sbjct: 274 QEDEAAAAQRRQEEHEAEQRRQQAEYEEQQRRQQAEAEEAARLKQEKAEEKMR 326
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 891 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 950
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 951 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1003
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1004 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1058
Query: 176 KAIQ 179
+ +
Sbjct: 1059 ELKK 1062
>gi|323449509|gb|EGB05397.1| hypothetical protein AURANDRAFT_1128 [Aureococcus anophagefferens]
Length = 492
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 24/101 (23%), Gaps = 3/101 (2%)
Query: 38 TYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQ-TKD- 95
Y + + L E Q L + KD
Sbjct: 2 EYRAALAQATREARQAQRVEAEQTRGVQRQHMDHRAQYKASLAQETQALAGRLDEALKDG 61
Query: 96 -PAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYA 135
+R L +I ++E+ +D L+ A
Sbjct: 62 EEERRAAHEAALEKIRKETAELEQELRRESDAAYLAARSKA 102
>gi|74004366|ref|XP_856818.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 10 [Canis familiaris]
Length = 2202
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 888 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 947
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 948 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1000
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1001 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1055
Query: 176 KAIQ 179
+ +
Sbjct: 1056 ELKK 1059
>gi|118371934|ref|XP_001019165.1| hypothetical protein TTHERM_00257100 [Tetrahymena thermophila]
gi|89300932|gb|EAR98920.1| hypothetical protein TTHERM_00257100 [Tetrahymena thermophila
SB210]
Length = 633
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 6/88 (6%), Positives = 20/88 (22%), Gaps = 2/88 (2%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+ + Q +N I + ++ ++ Q+ + +
Sbjct: 530 RSNQQCLEQINQQQQFLNEKIEEQNNQLAKQNEQLEEMTK--QYQEKIQQNQQLEQEIEF 587
Query: 63 PDNIAKELDSEILEKKLIAENQQLEHLF 90
+ + + QL
Sbjct: 588 LKQKNEMEIEYQRQIHKAKQESQLIPAI 615
>gi|195340791|ref|XP_002036996.1| GM12679 [Drosophila sechellia]
gi|194131112|gb|EDW53155.1| GM12679 [Drosophila sechellia]
Length = 1310
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 7/109 (6%)
Query: 8 LAQSAEALAQLI--NHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDN 65
+AQ E + Q + LEK + Y + K L +H ET +
Sbjct: 445 MAQEVEVVKQNQRRQQEKEVEPQEQLEKEQHQNYMQQEEQNGKELRNKDHHSETKQQGIQ 504
Query: 66 -----IAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRI 109
K + +++ E Q ++ L + QRE + +
Sbjct: 505 KLTRDQRKAEQRQEKDQQPEREQQGIQQLTRDQRKAIQREKEREQERQY 553
>gi|229109630|ref|ZP_04239218.1| Excalibur domain protein [Bacillus cereus Rock1-15]
gi|228673816|gb|EEL29072.1| Excalibur domain protein [Bacillus cereus Rock1-15]
Length = 289
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 8/121 (6%), Positives = 29/121 (23%), Gaps = 4/121 (3%)
Query: 20 NHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKL 79
+ L + + +++A E + E +++
Sbjct: 152 EKTQKQEDEKRLAEE---QARKQEDEKRQADEQARKQQEEQKRQAGEQARKQQEEQKRQA 208
Query: 80 IAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT-DHRLLSLAYYAQIG 138
+ ++ + + D R+ + + + + A A +
Sbjct: 209 DEQARKQQEEQKRQADEQARKQQEEQKAQQAQTQPASGNTSSAYYKNCAAVRAAGKAPLY 268
Query: 139 L 139
Sbjct: 269 K 269
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 3/75 (4%), Positives = 19/75 (25%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
+ + + + + + +++A E + +
Sbjct: 154 TQKQEDEKRLAEEQARKQEDEKRQADEQARKQQEEQKRQAGEQARKQQEEQKRQADEQAR 213
Query: 70 LDSEILEKKLIAENQ 84
E +++ + +
Sbjct: 214 KQQEEQKRQADEQAR 228
>gi|74004362|ref|XP_848667.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 1 [Canis familiaris]
Length = 2168
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 854 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 913
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 914 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 966
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 967 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1021
Query: 176 KAIQ 179
+ +
Sbjct: 1022 ELKK 1025
>gi|324500277|gb|ADY40136.1| Kinesin-like protein KIF21B [Ascaris suum]
Length = 1710
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 14/151 (9%), Positives = 38/151 (25%), Gaps = 22/151 (14%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
E Y R + + R + L L + D
Sbjct: 767 EDYERKLNEMRAEFKKLQSVEREHRKMQARQAMEQQQ------------LLKLRSELAD- 813
Query: 97 AQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKP 156
+ L + +K + ++ + ++ +++K
Sbjct: 814 --MKKLKVELMQ-KIKEEAKKAKASELAHSKKVAGLEK-----ETRKKDSLIKQLENKDR 865
Query: 157 FVNITTNKAKNH-RRITSQEKAIQKLYQTGS 186
+ + R+ Q + + +L ++G
Sbjct: 866 QREMFLKRTTEEITRLRQQNRQVNRLPKSGR 896
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo sapiens]
gi|229462995|sp|Q9UIF8|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic construct]
Length = 2168
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 890 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 949
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 950 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1002
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1003 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1057
Query: 176 KAIQ 179
+ +
Sbjct: 1058 ELKK 1061
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Ailuropoda melanoleuca]
Length = 2169
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 889 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 948
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 949 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1001
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1002 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1056
Query: 176 KAIQ 179
+ +
Sbjct: 1057 ELKK 1060
>gi|327263715|ref|XP_003216663.1| PREDICTED: intraflagellar transport protein 74 homolog [Anolis
carolinensis]
Length = 621
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSS--PTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ + + +A+ I + + + Y + +K L ++ +
Sbjct: 193 ERQNKEKLIQAVEDDIQQEKQAAENIIKNMSEEDQVKYMETKMANEKLLQELSALQQELD 252
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLF 90
+ + L+ EI ++ E QL
Sbjct: 253 ALNMKEQALEGEIAHSQVKQEALQLYEKL 281
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
gi|123236722|emb|CAM26914.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/182 (9%), Positives = 52/182 (28%), Gaps = 16/182 (8%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHR----IRYLRQKALNIINHFV 57
QA+ +A+ A + + + + +K + +
Sbjct: 807 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQMKIIKQQ----- 861
Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
E + I E + + + ++ E + + +R + + +L Q+
Sbjct: 862 EKIKRIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEAEKRTKEKELRRQQAVLLKHQE 921
Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKA 177
E R + A + + E + R + +N + + ++
Sbjct: 922 RERR-----RQHVMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAKEL 976
Query: 178 IQ 179
+
Sbjct: 977 KK 978
>gi|296805489|ref|XP_002843569.1| DUF1720 domain-containing protein [Arthroderma otae CBS 113480]
gi|238844871|gb|EEQ34533.1| DUF1720 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1455
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 31/118 (26%), Gaps = 2/118 (1%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ Q L Q +A T + E R + Q L + V G+
Sbjct: 1024 EEQEAALRQEQQAQEAETEQLDTLSRDETRRQE--EELAREKEAAQARLKALEEQVRQGK 1081
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEE 119
K + ++ E + + + L +G+ ++
Sbjct: 1082 IKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGDEESSSDDD 1139
>gi|158286819|ref|XP_001688140.1| AGAP006800-PA [Anopheles gambiae str. PEST]
gi|157020650|gb|EDO64789.1| AGAP006800-PA [Anopheles gambiae str. PEST]
Length = 633
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 26 DSSPTLEKTYP--ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE 82
+ T ++T P R R ++ A + ++ +++ + ++ L +
Sbjct: 252 EPDDTDDETNPMNILRKRQREQQEDAKDDLHAYLDLQQMAVAAQNSHAQLQYQQHLKLQ 310
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 864 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 923
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 924 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 976
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 977 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1031
Query: 176 KAIQ 179
+ +
Sbjct: 1032 ELKK 1035
>gi|324500546|gb|ADY40254.1| Kinesin-like protein KIF21B [Ascaris suum]
Length = 1604
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 14/151 (9%), Positives = 38/151 (25%), Gaps = 22/151 (14%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDP 96
E Y R + + R + L L + D
Sbjct: 767 EDYERKLNEMRAEFKKLQSVEREHRKMQARQAMEQQQ------------LLKLRSELAD- 813
Query: 97 AQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKP 156
+ L + +K + ++ + ++ +++K
Sbjct: 814 --MKKLKVELMQ-KIKEEAKKAKASELAHSKKVAGLEK-----ETRKKDSLIKQLENKDR 865
Query: 157 FVNITTNKAKNH-RRITSQEKAIQKLYQTGS 186
+ + R+ Q + + +L ++G
Sbjct: 866 QREMFLKRTTEEITRLRQQNRQVNRLPKSGR 896
>gi|206972147|ref|ZP_03233095.1| excalibur domain protein [Bacillus cereus AH1134]
gi|206733070|gb|EDZ50244.1| excalibur domain protein [Bacillus cereus AH1134]
Length = 302
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 5/90 (5%), Positives = 21/90 (23%)
Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
+ + + + + ++ A E + +
Sbjct: 152 TQKQEDEKRLAEEQARKQEDEKRLADEQARKQQEEQKRLADEQARKQQEEQKRLADEQAR 211
Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQR 99
E ++ + ++ + + D R
Sbjct: 212 KQQEEQKRLADEQARKQQEEQKRLADEQAR 241
>gi|194881557|ref|XP_001974897.1| GG22026 [Drosophila erecta]
gi|190658084|gb|EDV55297.1| GG22026 [Drosophila erecta]
Length = 1040
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 37 ETYHRIRYLRQKA------LNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
++R + +Q+ N ++ AK + L+ + E + +
Sbjct: 180 IDWNRQKEEQQRRERKVQEQAKRNKEIKEVDERLKQAKAKQEQELKDIIEQELRAKINKI 239
Query: 91 PQ 92
+
Sbjct: 240 EE 241
>gi|74004348|ref|XP_856450.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 2 [Canis familiaris]
Length = 2167
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 888 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 947
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 948 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1000
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1001 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1055
Query: 176 KAIQ 179
+ +
Sbjct: 1056 ELKK 1059
>gi|145639159|ref|ZP_01794766.1| electron transport complex protein RnfC [Haemophilus influenzae
PittII]
gi|145271721|gb|EDK11631.1| electron transport complex protein RnfC [Haemophilus influenzae
PittII]
Length = 651
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 45/167 (26%), Gaps = 17/167 (10%)
Query: 37 ETYHRI-RYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTK- 94
Y R + + E + +++ + + +
Sbjct: 434 IQYFRQEKAKIWQIKEKQKKSDEAKIRFEAKQ-ARMEREEQERKARSQRAAQARREELAQ 492
Query: 95 ----DPAQRENF-----FKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLS 145
DP + N I E+ + D+ L A+ + Q S
Sbjct: 493 TKGEDPVKAALERLKAKKANETESTQIKTLTSEKGEVLPDNTDLMAQRKARRLARQQAAS 552
Query: 146 EDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLE 192
+ + + +P TN K +KL QT S +++
Sbjct: 553 QVENQEQQTQP-----TNAKKAAVAAALARTKAKKLAQTNSTSEAIS 594
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 889 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 948
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 949 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1001
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1002 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1056
Query: 176 KAIQ 179
+ +
Sbjct: 1057 ELKK 1060
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 889 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 948
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 949 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 1001
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 1002 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1056
Query: 176 KAIQ 179
+ +
Sbjct: 1057 ELKK 1060
>gi|74004364|ref|XP_856778.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 9 [Canis familiaris]
Length = 2104
Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 790 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 849
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 850 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 902
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 903 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 957
Query: 176 KAIQ 179
+ +
Sbjct: 958 ELKK 961
>gi|291567328|dbj|BAI89600.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 266
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAEN-QQLEHLFPQTK 94
+ R + ++A A+ E + AE +L +
Sbjct: 202 QEAERAQQEAERAQREAERAQREAERAQQEAERAQQEAERAQQEAERANRLAEKLRELG 260
>gi|291567323|dbj|BAI89595.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|291567327|dbj|BAI89599.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 266
Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAEN-QQLEHLFPQTK 94
+ R + ++A A+ E + AE +L +
Sbjct: 202 QEAERAQQEAERAQREAERAQREAERAQQEAERAQQEAERAQQEAERANRLAEKLRELG 260
>gi|145544066|ref|XP_001457718.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425536|emb|CAK90321.1| unnamed protein product [Paramecium tetraurelia]
Length = 1151
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 50/133 (37%), Gaps = 9/133 (6%)
Query: 5 AKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIR------YLRQKALNIINHFVE 58
+ + Q+ + + Q ++ + L ++ ++ + + ++ + +
Sbjct: 927 KQTVKQNTQEIKQQVDKNQDQIKLQELVQSKEIQFYEEKLSSLMKEIDEEKNKRVQIEQD 986
Query: 59 TGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKE 118
T + ++ E SEI E+K + Q+LE+ + + L + Q
Sbjct: 987 TNQRIQSLKLEQQSEITEEKHREQIQKLENEI--FRRDQIIHDLNVKLNDYSKQIK-QSN 1043
Query: 119 EMVDITDHRLLSL 131
M ++D + + +
Sbjct: 1044 SMNRLSDVQNIKI 1056
>gi|13345187|gb|AAK19244.1|AF312916_1 reticulocyte binding protein 2 homolog A [Plasmodium falciparum]
Length = 3130
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 16/48 (33%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
++ Q+ L + K+ + E+ E ++L+
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQK 2785
>gi|66801013|ref|XP_629432.1| myb domain-containing protein [Dictyostelium discoideum AX4]
gi|60462823|gb|EAL61023.1| myb domain-containing protein [Dictyostelium discoideum AX4]
Length = 1221
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 18/63 (28%), Gaps = 7/63 (11%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRE 100
R + + I +E + L++ + QQL+ D +
Sbjct: 119 RKDETEEARNERLESIRLEKERLKQI-REQQRKQLQELEKNQRQQLQE------DKEKSA 171
Query: 101 NFF 103
N
Sbjct: 172 NAR 174
>gi|224489535|emb|CAB54509.2| C. elegans protein Y79H2A.3a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1951
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 3/92 (3%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQT-KDPAQR 99
+ Q+A I+ + + ++ + KL AE L +P K P
Sbjct: 951 AAKLAAQEAKKDISLKSRLEQASMQQRERQKIDVQQAKLEAERILLLSKYPNFGKGPTAA 1010
Query: 100 ENFFKNLFRIGNILGFQKEEMVDITDHRLLSL 131
+ + + + + +
Sbjct: 1011 AATRPQV--TAKQVPLNPYGVSSFGVAQAIIV 1040
>gi|124513454|ref|XP_001350083.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7]
gi|74842797|sp|Q8IDX6|RBP2A_PLAF7 RecName: Full=Reticulocyte-binding protein 2 homolog a
gi|23615500|emb|CAD52492.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7]
gi|33413772|gb|AAN39443.1| normocyte binding protein 2a [Plasmodium falciparum]
Length = 3130
Score = 34.6 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 16/48 (33%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
++ Q+ L + K+ + E+ E ++L+
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQK 2785
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Anolis carolinensis]
Length = 2184
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 55/185 (29%), Gaps = 22/185 (11%)
Query: 4 QAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVET---- 59
QA+ +A+ A + +L+ + + ++ + ++K I +
Sbjct: 899 QAQEIARQAAQI-KLLRKLQKQEQARAAKEAKKQQAIIAAEEKRKQKEQIKIMKQQEKIK 957
Query: 60 ---GRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILG 114
+ + +KK A N +L +R + + +L
Sbjct: 958 RIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLK 1010
Query: 115 FQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQ 174
Q+ E R + A + + E + R + +N + +
Sbjct: 1011 HQERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMA 1065
Query: 175 EKAIQ 179
++ +
Sbjct: 1066 KELKK 1070
>gi|194746954|ref|XP_001955919.1| GF24935 [Drosophila ananassae]
gi|190623201|gb|EDV38725.1| GF24935 [Drosophila ananassae]
Length = 2933
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 41/171 (23%), Gaps = 15/171 (8%)
Query: 13 EALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPD-NIAKELD 71
+ + + + ++A E + +
Sbjct: 1160 NIVQERLKQEQRQK---EQRERDARDQAEREKALREAEARERLVREEQTRLESQRQQAAF 1216
Query: 72 SEILEKKLIAENQQLEHLFPQTKDPAQRENFF--KNLFRIGNILGFQKEEMVDITDHRLL 129
+ + E ++ A RE + + + +E+ +HR +
Sbjct: 1217 EQAQRELAARELA--------LREQAVREEEARLQAIREQASREQLAREQAAREEEHR-I 1267
Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
+ +L + R + + R +E IQ+
Sbjct: 1268 QTLREIAKREEEVRLQSKREEETRIRREEEERIRRESEARLKREEEARIQR 1318
>gi|303275478|ref|XP_003057033.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461385|gb|EEH58678.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 661
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 39/155 (25%), Gaps = 11/155 (7%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK-----------LIAENQQLEH 88
L +K + + R + + K L A+ + +
Sbjct: 488 AARDDLFEKKKEAVKKWRAKQREAAAAHRAKLDAEHDAKERLRATKASAELAAQRSREKE 547
Query: 89 LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDA 148
+ K+ + E + L N + + ++ A+ + Q A
Sbjct: 548 ALREWKEKKRSEEENRKLCAAANDAAAAEARAERLRLKKIERAERDARNAWREQARVAAA 607
Query: 149 YHKIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQ 183
+ + S + ++L +
Sbjct: 608 ENARIAAEKAAAALIPSAPPTSQASAKAERERLAK 642
>gi|229043921|ref|ZP_04191617.1| Excalibur domain protein [Bacillus cereus AH676]
gi|229127581|ref|ZP_04256572.1| Excalibur domain protein [Bacillus cereus BDRD-Cer4]
gi|228655927|gb|EEL11774.1| Excalibur domain protein [Bacillus cereus BDRD-Cer4]
gi|228725452|gb|EEL76713.1| Excalibur domain protein [Bacillus cereus AH676]
Length = 299
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 6/89 (6%), Positives = 23/89 (25%), Gaps = 3/89 (3%)
Query: 20 NHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKL 79
+ L + +++A E + + E ++
Sbjct: 147 EKTQKQEDEKRLADE---QARKQEDEKRQADEQARKQQEEQKRLADEQARKQQEEQKRLA 203
Query: 80 IAENQQLEHLFPQTKDPAQRENFFKNLFR 108
+ ++ + + D R+ + +
Sbjct: 204 DEQARKQQEEQKRLADEQARKQQEEQKRQ 232
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 842 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 901
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 902 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 954
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 955 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1009
Query: 176 KAIQ 179
+ +
Sbjct: 1010 ELKK 1013
>gi|74004358|ref|XP_856656.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 7 [Canis familiaris]
Length = 2133
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 854 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 913
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 914 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 966
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 967 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 1021
Query: 176 KAIQ 179
+ +
Sbjct: 1022 ELKK 1025
>gi|74004354|ref|XP_856574.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 5 [Canis familiaris]
Length = 2070
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 756 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 815
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 816 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 868
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 869 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 923
Query: 176 KAIQ 179
+ +
Sbjct: 924 ELKK 927
>gi|74004360|ref|XP_856693.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2B
(hWALp4) isoform 8 [Canis familiaris]
Length = 2129
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 55/184 (29%), Gaps = 20/184 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + + +K + +++ + I+ +
Sbjct: 815 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 874
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 875 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 927
Query: 116 QKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQE 175
Q+ E R + A + + E + R + +N + + +
Sbjct: 928 QERERR-----RQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAK 982
Query: 176 KAIQ 179
+ +
Sbjct: 983 ELKK 986
>gi|159462402|ref|XP_001689431.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283419|gb|EDP09169.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1905
Score = 34.6 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 2/99 (2%)
Query: 25 DDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAEN- 83
+P + PE R + + +A +T A I + + E
Sbjct: 1049 PVPAPIALQAEPEQAVREQLGQNQAQAQHMQ-DQTRTTLAEQADGQQQRITQVRTEQEAP 1107
Query: 84 QQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVD 122
+ L+ P+ E + G +++
Sbjct: 1108 EALQQEAPEALLQEAPEALQQEAPNEAQQQGLMQQDARQ 1146
>gi|260913865|ref|ZP_05920339.1| electron transport complex [Pasteurella dagmatis ATCC 43325]
gi|260631952|gb|EEX50129.1| electron transport complex [Pasteurella dagmatis ATCC 43325]
Length = 753
Score = 34.6 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 32/125 (25%), Gaps = 13/125 (10%)
Query: 37 ETYHRI-RYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTK- 94
Y R + E + + L + +++ + + + K
Sbjct: 433 IQYFRQEKAKIWDIKEKAKQAEEAKQRFEARQARL-EKEEQERKARAQKAMVARREEMKT 491
Query: 95 ----DPAQRENFFKNLFRIGNILGFQK------EEMVDITDHRLLSLAYYAQIGLQSQKL 144
DP Q + E+ + D+ + A+ + Q+
Sbjct: 492 QDGVDPVQAALERLKAKKTETEASLTPVKTIIGEKGEILPDNSDIMAQRKARRLARQQEA 551
Query: 145 SEDAY 149
E A
Sbjct: 552 GETAK 556
>gi|225571977|ref|ZP_03780841.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM
10507]
gi|225040510|gb|EEG50756.1| hypothetical protein RUMHYD_00271 [Blautia hydrogenotrophica DSM
10507]
Length = 1186
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Query: 8 LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
L + E QL + + E+Y +++ ++ +
Sbjct: 231 LLEMEEIDEQLQEKKQKKSLTEEQLQKTQESYGQVKEEYEELEQKLQKLNTRIEQI--RE 288
Query: 68 KELDSEILEKKLIAENQQLEHLF 90
+ + ++L + + L+
Sbjct: 289 ETQQDALRRQQLEGQVEVLKEQI 311
>gi|322494807|emb|CBZ30110.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1041
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Query: 34 TYPETYHRIRYLRQKALNII-------NHFVETGRNPDNIAKELDSEILEKKLIAENQQL 86
PE +R +++ + +E +++ +K E +Q
Sbjct: 377 HDPEKEAALRAEQRREREDAARAARDERQRQQQLIEEAQKQREEEAQKRRQKKEDEARQR 436
Query: 87 EHLFPQTKDPAQRENFFK 104
+ + + + +RE
Sbjct: 437 KEMLTKMDEERKRERDAA 454
>gi|62644491|ref|XP_221882.3| PREDICTED: guanylate binding protein 1, interferon-inducible, 67kDa
[Rattus norvegicus]
gi|109467739|ref|XP_001078913.1| PREDICTED: guanylate binding protein 1, interferon-inducible, 67kDa
[Rattus norvegicus]
Length = 780
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 9 AQSAEALAQLINHHIPDDSSPTLEKTYPETYHR-IRYLRQKALNIINHFVETGRNPDNIA 67
A+SA+A A+L+ + L + +Y ++ L +K N ++
Sbjct: 497 AESAQAAAKLLEETQKK--NEKLMEQKERSYQEHMKQLTEKMENDRIQLKAEQERILSLK 554
Query: 68 KELDSEILEKKLIAENQQLEHLFPQTKDPAQRENF 102
+ ++L++ E+++L+ + K+ +R
Sbjct: 555 LQEQKQLLQEGFREESRKLQE---EMKNVEKRYKE 586
>gi|311259352|ref|XP_003128058.1| PREDICTED: BEN domain-containing protein 5-like [Sus scrofa]
Length = 309
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 6/83 (7%)
Query: 18 LINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEK 77
+ + +L E R L ++ L E R+ + +++++
Sbjct: 75 FVEASPGPEDMDSL-----EEAAVPRALYEELLRNYQQQQEEMRHLQQELERTRRQLVQQ 129
Query: 78 KLI-AENQQLEHLFPQTKDPAQR 99
E L + +D +R
Sbjct: 130 AKKLKEYGALVSEMKELRDLNRR 152
>gi|291567321|dbj|BAI89593.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 266
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 37 ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAEN-QQLEHLFPQTK 94
+ R + ++A A+ E + AE +L +
Sbjct: 202 QEAERAQQEAERAQREAERAQREAERAQQEAERAQQEAERAQQEAERANRLAEKLRELG 260
>gi|294661197|ref|YP_003573073.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336348|gb|ACP20945.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus
5a2]
Length = 846
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%)
Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
+ ++ LAQ E L Q ++ E + R+R + +
Sbjct: 316 EEASERLAQEEERLRQEAERAAGEERIRQEEGRLQQAAERLRQEEGRLQQAAERLRQEEG 375
Query: 62 NPDNIAKELDSEILEKKLIAENQQLEH 88
A+ L + + K E ++L
Sbjct: 376 RLQQAAERLKQKEEKLKQAEEAERLRQ 402
>gi|145610539|ref|XP_001410423.1| hypothetical protein MGG_11427 [Magnaporthe oryzae 70-15]
gi|145017905|gb|EDK02184.1| hypothetical protein MGG_11427 [Magnaporthe oryzae 70-15]
Length = 996
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 11/145 (7%), Positives = 35/145 (24%), Gaps = 7/145 (4%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ- 98
R L+++ + K + ++ + E++ L D A+
Sbjct: 749 ARENELQRQQKAKEDELRRQIEQLQRQQKAKEDDLARQHKAREDELRRQL-----DQAKS 803
Query: 99 -RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
+ + + + + + AQ ++ A
Sbjct: 804 TSAAEVDKVKKTAQADAERAQREAEQVKKSSTAELERAQRRSEAALADLKATISRLEVDL 863
Query: 158 VNITTNKAKNHRRITSQEKAIQKLY 182
+ K + + + +
Sbjct: 864 MKAGKAKTAELQSLREELEKKVTAK 888
>gi|328948090|ref|YP_004365427.1| P83100 family protein [Treponema succinifaciens DSM 2489]
gi|328448414|gb|AEB14130.1| P83100 family protein [Treponema succinifaciens DSM 2489]
Length = 567
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 14/164 (8%), Positives = 43/164 (26%), Gaps = 11/164 (6%)
Query: 3 NQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN 62
+ A A+ A+ D ++ + +
Sbjct: 276 QAKQNEADKAKKTAENAQKEAAADPQNKAKQAD-AKQAEQKAENAQKEADQAKSNAEQEQ 334
Query: 63 PDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVD 122
++ ++ KK + Q+ + + +N + + + + E+
Sbjct: 335 QKTQQQKQKADESAKKAEEQQQKADKKLDE------AQNERMEIAK--DQQEILEAELKQ 386
Query: 123 ITDHRLL--SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNK 164
+ D ++ + A K++ ++ P I
Sbjct: 387 LEDGTVIGLKVVKEANYLSTLVKVNSKTGKVVKESPVKVIRGRT 430
>gi|296111977|ref|YP_003622359.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154]
gi|295833509|gb|ADG41390.1| hypothetical protein LKI_09255 [Leuconostoc kimchii IMSNU 11154]
Length = 788
Score = 34.6 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 40/129 (31%), Gaps = 5/129 (3%)
Query: 1 MQNQAKILAQSAEALAQLINHH--IPDDSSPTLEKTYPETYHRIRYLRQKALNII--NHF 56
++ LAQ E L+ + + L+ Y R + + I +
Sbjct: 514 IKQHQTQLAQQLETRQNLLQKYHVTTIEEINHLKLEN-IDYLRKKQRYDDLMQQIDSDKL 572
Query: 57 VETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQ 116
++ + D+ + + +++L Q + + Q D ++ +
Sbjct: 573 IQLRQIKDDNELQKQIILTQQELEKAQQLVLTIQTQLSDLQAQQKQRTSDDAFLKQQQDL 632
Query: 117 KEEMVDITD 125
E + D
Sbjct: 633 ANERTVLID 641
>gi|117920388|ref|YP_869580.1| protein-glutamate O-methyltransferase [Shewanella sp. ANA-3]
gi|117612720|gb|ABK48174.1| Protein-glutamate O-methyltransferase [Shewanella sp. ANA-3]
Length = 740
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 3/46 (6%), Positives = 13/46 (28%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQ 85
+ +++ + + D + ++ L E +
Sbjct: 357 TQAVQEQEQKQQALAEVFAKADQSKQAQQAQDEQTRQQDLAKEQVK 402
>gi|332229279|ref|XP_003263819.1| PREDICTED: LOW QUALITY PROTEIN: intersectin-1-like [Nomascus
leucogenys]
Length = 1795
Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 8/85 (9%), Positives = 26/85 (30%), Gaps = 14/85 (16%)
Query: 19 INHHIPDDS-----SPTLEKTYPETYHRIRYLR---------QKALNIINHFVETGRNPD 64
++ +P++ LEK P T+ + ++ ++ +
Sbjct: 325 VDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA 384
Query: 65 NIAKELDSEILEKKLIAENQQLEHL 89
+ + ++ E ++ L
Sbjct: 385 QLERAEQERKERERQEQERKRQLEL 409
>gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1210
Score = 34.2 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 15/50 (30%)
Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHL 89
R R ++ + + + E K+L + + LE
Sbjct: 882 ARARKQDEEEKELRAKQEQERDLLRQQLLKEQEEKRNKELEEQKKLLEQR 931
>gi|158286821|ref|XP_001688141.1| AGAP006800-PB [Anopheles gambiae str. PEST]
gi|157020651|gb|EDO64790.1| AGAP006800-PB [Anopheles gambiae str. PEST]
Length = 552
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 26 DSSPTLEKTYP--ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE 82
+ T ++T P R R ++ A + ++ +++ + ++ L +
Sbjct: 252 EPDDTDDETNPMNILRKRQREQQEDAKDDLHAYLDLQQMAVAAQNSHAQLQYQQHLKLQ 310
>gi|224044643|ref|XP_002187267.1| PREDICTED: myeloid/lymphoid or mixed-lineage leukemia 3 [Taeniopygia
guttata]
Length = 4885
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 5/84 (5%), Positives = 20/84 (23%), Gaps = 6/84 (7%)
Query: 19 INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78
E P + +++ + + + + L+++
Sbjct: 3350 AAAQSGPPPRVEFEDNNPFS----ESFQERERKERLREQQERQRIQLMQEVDRQRALQQR 3405
Query: 79 LIAENQQLEHLFPQTKDPAQRENF 102
+ E + P+ +
Sbjct: 3406 MELEQHSMMG--PELNNKTSLSQI 3427
>gi|312374483|gb|EFR22030.1| hypothetical protein AND_15859 [Anopheles darlingi]
Length = 513
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 6/70 (8%), Positives = 16/70 (22%), Gaps = 8/70 (11%)
Query: 42 IRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQREN 101
R ++ L E + + K + E + ++ + +
Sbjct: 58 ARKRYEEQLAQQQRVQEENLRKQEESVAKQEAMRRKTIEHEM--------ELREKNKMKL 109
Query: 102 FFKNLFRIGN 111
L
Sbjct: 110 LEAELRAKAK 119
>gi|229596818|ref|XP_976651.3| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|225565091|gb|EAR86056.3| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 654
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 32 EKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
+ + + + + Q+ + + +EL +IL++++ E +L+ L
Sbjct: 379 LQQNEQELEKQKMILQQNEQELE--KQKMIQQQKEQEELKQKILQQQMQEEQNKLQQLI 435
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus
gallus]
gi|22653663|sp|Q9DE13|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein
2B; AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 34.2 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/188 (10%), Positives = 57/188 (30%), Gaps = 19/188 (10%)
Query: 4 QAKILAQSAEALA--QLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVE--- 58
QA+ +A+ A + + + ++ +K + +++ + I+ +
Sbjct: 804 QAQEIARQAAQIKLLRKLQKQEQARAAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKR 863
Query: 59 -TGRNPDNIAKELD--SEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGF 115
+ + +KK A N +L +R + + +L
Sbjct: 864 IQQIRMEKELRAQQILEAKKKKKEEAANAKLLEA-------EKRIKEKEMRRQQAVLLKH 916
Query: 116 QKEEMVDIT----DHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRI 171
Q+ E + R + A + + E + R + +N + +
Sbjct: 917 QELERHRLDMERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLEL 976
Query: 172 TSQEKAIQ 179
++ +
Sbjct: 977 EMAKELKK 984
>gi|296195664|ref|XP_002745516.1| PREDICTED: TNFAIP3-interacting protein 1-like [Callithrix jacchus]
Length = 499
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
++ Q K L + + Q L + ++ L+ +
Sbjct: 216 LEKQRKELLEVNQQWDQQFRSM------KELYERKVAELKTKLDAAERFLSTREKEQQQR 269
Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFR 108
+ D+ ++L ++L+++ E ++L + K+ + L
Sbjct: 270 QREDDRQRDLTRDLLQRE-EKEKERLNEELHELKNENKLLKENNALVN 316
>gi|307193129|gb|EFN76046.1| Calmodulin-regulated spectrin-associated protein 1 [Harpegnathos
saltator]
Length = 1578
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 34/129 (26%), Gaps = 3/129 (2%)
Query: 44 YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103
+K I R KE + E ++L+ K +R+
Sbjct: 1118 DEMEKKKERIMLLSLQRRQRQEEMKERKEAEAQAH--REQEKLKAEERARKKEEERQRRA 1175
Query: 104 KNLFRIGNILGFQKEEMVD-ITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT 162
L ++ E + D LL+ A++ ++ V +
Sbjct: 1176 AILEHHKVKKAIEEAEREGKVIDKELLNAINPAKLRNKTATARPRPKTIHGDAGAVLDSG 1235
Query: 163 NKAKNHRRI 171
+ +
Sbjct: 1236 ALTPSRGKK 1244
>gi|221130166|ref|XP_002164299.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 1064
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 41 RIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQ 98
R R + ++A E E +S++ ++K AE QQL Q K+ +
Sbjct: 835 RARRIDEEAQEQRKKQDEERELLRQQQLEAESKLNQQK-EAEKQQLLEKRAQYKEATK 891
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.301 0.137 0.334
Lambda K H
0.267 0.0424 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,192,718,174
Number of Sequences: 14124377
Number of extensions: 34031592
Number of successful extensions: 3572253
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 30823
Number of HSP's successfully gapped in prelim test: 21526
Number of HSP's that attempted gapping in prelim test: 1452677
Number of HSP's gapped (non-prelim): 831466
length of query: 196
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 64
effective length of database: 2,978,375,866
effective search space: 190616055424
effective search space used: 190616055424
T: 11
A: 40
X1: 16 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.7 bits)
S2: 77 (34.2 bits)