BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781144|ref|YP_003065557.1| hypothetical protein CLIBASIA_05240 [Candidatus Liberibacter asiaticus str. psy62] (76 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|227822448|ref|YP_002826420.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234] gi|227341449|gb|ACP25667.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234] Length = 684 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 36/74 (48%), Positives = 53/74 (71%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 MDA VN GLG+G RE+D+MM+ + LQ+++L T G +NP+VS +LYNGIA+ EA G+ Sbjct: 517 MDATVNTGLGAGTRERDMMMIQMIQQLQEKLLMTLGPDNPYVSPDNLYNGIAKSVEAAGL 576 Query: 61 QNVNEYFNNPDSEQ 74 ++ + YF P E+ Sbjct: 577 KSPDLYFTKPTPEE 590 >gi|150397041|ref|YP_001327508.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419] gi|150028556|gb|ABR60673.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419] Length = 683 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 53/74 (71%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 MDA +N GLG+G RE+D+MM+ +L LQ+++L G +NP+VS +LYNGIA+ EA G+ Sbjct: 516 MDATINTGLGAGTRERDMMMIQMILQLQEKLLMALGPDNPYVSPDNLYNGIAKSVEAAGL 575 Query: 61 QNVNEYFNNPDSEQ 74 ++ + YF P E+ Sbjct: 576 KSPDLYFTKPAPEE 589 >gi|291334599|gb|ADD94249.1| hypothetical protein Daci_1943 [uncultured phage MedDCM-OCT-S04-C136] Length = 741 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILA-TFGLNNPFVSTTHLYNGIARLAEAVGV 60 + + +GLG+G++E+ +M++ +L Q + G P V+ ++YN + ++ E G+ Sbjct: 537 NISIVVGLGTGSKEQQTIMLNSILERQLQAFQIQGGKEMPMVNLKNMYNTLTKMVENAGL 596 Query: 61 QNVNEYFNNPDSEQ 74 +NV YF +PD + Sbjct: 597 KNVETYFVDPDVGK 610 >gi|227822445|ref|YP_002826417.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234] gi|227341446|gb|ACP25664.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234] Length = 361 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 36/74 (48%), Positives = 53/74 (71%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 MDA VN GLG+G RE+D+MM+ + LQ+++L T G +NP+VS +LYNGIA+ EA G+ Sbjct: 194 MDATVNTGLGAGTRERDMMMIQMIQQLQEKLLMTLGPDNPYVSPDNLYNGIAKSVEAAGL 253 Query: 61 QNVNEYFNNPDSEQ 74 ++ + YF P E+ Sbjct: 254 KSPDLYFTKPTPEE 267 >gi|254781144|ref|YP_003065557.1| hypothetical protein CLIBASIA_05240 [Candidatus Liberibacter asiaticus str. psy62] gi|254040821|gb|ACT57617.1| hypothetical protein CLIBASIA_05240 [Candidatus Liberibacter asiaticus str. psy62] Length = 76 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV Sbjct: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 Query: 61 QNVNEYFNNPDSEQWN 76 QNVNEYFNNPDSEQWN Sbjct: 61 QNVNEYFNNPDSEQWN 76 >gi|315122535|ref|YP_004063024.1| hypothetical protein CKC_03935 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495937|gb|ADR52536.1| hypothetical protein CKC_03935 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 637 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 60/71 (84%), Positives = 67/71 (94%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 MDAKVNIGLGSG+REKD MM+SHLL LQKEILATFG+NNPFVS+T+LYNGIARLAE++GV Sbjct: 503 MDAKVNIGLGSGSREKDTMMISHLLGLQKEILATFGINNPFVSSTNLYNGIARLAESIGV 562 Query: 61 QNVNEYFNNPD 71 QNVNEYF PD Sbjct: 563 QNVNEYFTRPD 573 >gi|27476052|ref|NP_775254.1| putative portal protein [Pseudomonas phage PaP3] gi|27414482|gb|AAL85568.1| ORF.04 [Pseudomonas phage PaP3] Length = 705 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D V +G+G+ N+++ ++ + + + + + G VS +LYN + + E G + Sbjct: 512 DLTVTVGIGNMNKDQQMLHLMRIWEMA-QAVVGGGGLGVLVSEQNLYNILKEVTENAGYK 570 Query: 62 NVNEYFNNPDSEQ 74 + + ++ NP+S + Sbjct: 571 DPDRFWTNPNSPE 583 >gi|148257059|ref|YP_001241644.1| hypothetical protein BBta_5791 [Bradyrhizobium sp. BTAi1] gi|146409232|gb|ABQ37738.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 557 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D + +GLGSG + + + +QKE++ +N V LYN A L +G + Sbjct: 356 DMTIEVGLGSGGKAQQFAQTMAIANVQKELVMAGKVN--LVGDRELYNTAAELTRIMGHK 413 Query: 62 NVNEYFNNPDS 72 N +FN+P + Sbjct: 414 NPGRFFNDPAA 424 >gi|167600438|ref|YP_001671938.1| portal protein [Pseudomonas phage LUZ24] gi|161168301|emb|CAP45466.1| portal protein [Pseudomonas phage LUZ24] Length = 706 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D V +G+G+ N+++ ++ + + + + + G VS +LYN + + E G + Sbjct: 513 DLTVTVGIGNMNKDQQMLHLMRIWEMA-QAVVGGGGLGVLVSEQNLYNILKEVTENAGYK 571 Query: 62 NVNEYFNNPDSEQ 74 + + ++ NPDS + Sbjct: 572 DPDHFWTNPDSPE 584 >gi|160897386|ref|YP_001562968.1| hypothetical protein Daci_1943 [Delftia acidovorans SPH-1] gi|160362970|gb|ABX34583.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 763 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 +A +N+GLG+G++++ + + + Q T GL + ++Y A+L +AVG + Sbjct: 560 NATINVGLGTGSKDQLVQQLMMIGQQQ-----TLGLQIGTATPKNVYETQAQLTKAVGFK 614 Query: 62 NVNEYFNN 69 + +++F + Sbjct: 615 SPDKFFVD 622 >gi|307308935|ref|ZP_07588618.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti BL225C] gi|306900569|gb|EFN31182.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti BL225C] Length = 677 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D ++ G +R++ + +++LLA Q + LA P V+ +++N +A+L E G + Sbjct: 517 DVTTSVAFGVMSRDQSMASLNNLLAQQYQALAQGL---PIVNAQNIFNTVAKLTELSGYK 573 Query: 62 NVNEYF 67 N ++ Sbjct: 574 NTAAHW 579 >gi|241760934|ref|ZP_04759023.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374553|gb|EER64014.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 729 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 M +V +GLGSG +++ + LL++Q++ LA + +YN IA + G+ Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571 Query: 61 QNVNEYFNNPD 71 N +Y +PD Sbjct: 572 GNPTDYLIDPD 582 >gi|56551276|ref|YP_162115.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4] gi|56542850|gb|AAV89004.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4] Length = 729 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 M +V +GLGSG +++ + LL++Q++ LA + +YN IA + G+ Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571 Query: 61 QNVNEYFNNPD 71 N +Y +PD Sbjct: 572 GNPTDYLIDPD 582 >gi|260753098|ref|YP_003225991.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552461|gb|ACV75407.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 729 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 1 MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60 M +V +GLGSG +++ + LL++Q++ LA + +YN IA + G+ Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571 Query: 61 QNVNEYFNNPD 71 N +Y +PD Sbjct: 572 GNPTDYLIDPD 582 >gi|288817860|ref|YP_003432207.1| putative portal protein [Hydrogenobacter thermophilus TK-6] gi|288787259|dbj|BAI69006.1| putative portal protein [Hydrogenobacter thermophilus TK-6] Length = 618 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D ++ G+G G ++ ++ L L + ++YN + +L E +G + Sbjct: 514 DVVISAGIGVGTKQTNMAN-----LQLLLQLYPKLLQLGIATPKNVYNLVKKLIEEMGYK 568 Query: 62 NVNEYFNNPDSEQ 74 NV+++ +P+ Q Sbjct: 569 NVDDFLQDPEQAQ 581 >gi|308751459|gb|ADO44942.1| hypothetical protein Hydth_0542 [Hydrogenobacter thermophilus TK-6] Length = 618 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D ++ G+G G ++ ++ L L + ++YN + L E +G + Sbjct: 514 DVVISAGIGVGTKQTNMAN-----LQLLLQLYPKLLQLGIATPKNVYNLVKNLIEEMGYK 568 Query: 62 NVNEYFNNPDSEQ 74 NV+++ +P+ Q Sbjct: 569 NVDDFLQDPEQAQ 581 >gi|291334641|gb|ADD94289.1| portal protein [uncultured phage MedDCM-OCT-S04-C64] Length = 755 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 + V +G+GS +RE+ ++ + ++A Q E++A G+ V +Y + +A+ G+Q Sbjct: 517 NTSVQVGVGSVSRERRMVALETIMAKQNELIANGGM-GTLVQPFQVYQTLRDIADGFGLQ 575 Query: 62 NVNEYFNNP 70 YF +P Sbjct: 576 -PQAYFTDP 583 >gi|221199509|ref|ZP_03572553.1| putative portal protein [Burkholderia multivorans CGD2M] gi|221205589|ref|ZP_03578604.1| putative portal protein [Burkholderia multivorans CGD2] gi|221174427|gb|EEE06859.1| putative portal protein [Burkholderia multivorans CGD2] gi|221180794|gb|EEE13197.1| putative portal protein [Burkholderia multivorans CGD2M] Length = 807 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 3 AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLN-NPFVSTTHLYNGIARLAEAVGVQ 61 KV +G G+G+ + + ++ L +Q+ + + V+ +L + + +A+ + Sbjct: 605 MKVVVGTGTGDMTERVAHLTQLFGMQQTLAQSPNPQIAGMVTPQNLQRTVHEIVKALQLG 664 Query: 62 NVNEYFNN 69 + + ++ Sbjct: 665 EPSMFVSD 672 >gi|291334835|gb|ADD94475.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041] Length = 223 Score = 37.9 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 18 IMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQNVNEYFNNP 70 ++ + ++A Q E++A G+ V +Y + + + G+Q YF +P Sbjct: 1 MVALETIMAKQNELIANGGM-GTLVQPFQVYQTLRDITDGFGLQ-PQAYFTDP 51 >gi|294083946|ref|YP_003550703.1| putative portal protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663518|gb|ADE38619.1| putative portal protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 697 Score = 37.5 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 D V + LG G ++ + + L + + P + + + ++ E G+ Sbjct: 532 DVMVELKLGYGEQDAEAQKMLAL----HTLFSQDPNIQPMYGMENRFAMLKKILEQQGIL 587 Query: 62 NVNEYFN 68 NV E+ Sbjct: 588 NVEEFLT 594 >gi|254426466|ref|ZP_05040181.1| hypothetical protein S7335_1149 [Synechococcus sp. PCC 7335] gi|196187478|gb|EDX82445.1| hypothetical protein S7335_1149 [Synechococcus sp. PCC 7335] Length = 1175 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 17 DIMMVSHLLALQKEILATFG--LNNPFVSTTHLYNGIARLAEAVGVQ 61 + + L +Q +L G ++NP V YN +A + E +G Q Sbjct: 228 QLKAMCQALGVQMLVLNPDGGAVSNPLVMRQ--YNALAEIVEGLGYQ 272 >gi|221271428|dbj|BAH15181.1| portal protein [Serratia phage KSP100] Length = 374 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%) Query: 3 AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQN 62 V + +G R + + L + A L+ + + + L A+G + Sbjct: 159 VIVAVAIGQNERRERANNLVQLSQF---LTANPLLSGTTFTAENANHLARELTLAMGFYD 215 Query: 63 VNEYFNNPDSEQ 74 VN + + Q Sbjct: 216 VNNFITPMEQVQ 227 >gi|316934283|ref|YP_004109265.1| putative portal protein [Rhodopseudomonas palustris DX-1] gi|315601997|gb|ADU44532.1| putative portal protein [Rhodopseudomonas palustris DX-1] Length = 673 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Query: 3 AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQN 62 +V++ +G G +EK+ + L + L+T + F Y + + G QN Sbjct: 508 VQVSLHVGYGEQEKEAARYAQLWGM----LSTDPKASMFCPPDKQYKLLTDGMKKNGFQN 563 Query: 63 VNEYFNNPDSEQ 74 ++Y PD + Sbjct: 564 FSDYLIPPDQVK 575 >gi|297519728|ref|ZP_06938114.1| methyl-accepting chemotaxis protein II [Escherichia coli OP50] Length = 305 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|30063338|ref|NP_837509.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 2a str. 2457T] gi|56479995|ref|NP_707781.2| methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 2a str. 301] gi|30041590|gb|AAP17318.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 2a str. 2457T] gi|56383546|gb|AAN43488.2| methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 2a str. 301] gi|281601333|gb|ADA74317.1| Methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 2002017] gi|313650101|gb|EFS14514.1| methyl-accepting chemotaxis protein II [Shigella flexneri 2a str. 2457T] gi|332757347|gb|EGJ87684.1| methyl-accepting chemotaxis protein II [Shigella flexneri 2747-71] gi|332766617|gb|EGJ96821.1| tsr [Shigella flexneri 2930-71] gi|333017675|gb|EGK36987.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-304] Length = 553 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|218695452|ref|YP_002403119.1| methyl-accepting chemotaxis protein II [Escherichia coli 55989] gi|218352184|emb|CAU97923.1| methyl-accepting chemotaxis protein II [Escherichia coli 55989] Length = 553 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|320668455|gb|EFX35282.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. LSU-61] Length = 553 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|15802298|ref|NP_288323.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 EDL933] gi|12515948|gb|AAG56876.1|AE005410_12 methyl-accepting chemotaxis protein II, aspartate sensor receptor [Escherichia coli O157:H7 str. EDL933] Length = 553 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|15831850|ref|NP_310623.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. Sakai] gi|168747917|ref|ZP_02772939.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4113] gi|168757925|ref|ZP_02782932.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4401] gi|168762316|ref|ZP_02787323.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4501] gi|168770873|ref|ZP_02795880.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4486] gi|168776563|ref|ZP_02801570.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4196] gi|168783190|ref|ZP_02808197.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4076] gi|168789755|ref|ZP_02814762.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC869] gi|168801874|ref|ZP_02826881.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC508] gi|195939590|ref|ZP_03084972.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4024] gi|208810571|ref|ZP_03252447.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4206] gi|208816891|ref|ZP_03258011.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4045] gi|208821820|ref|ZP_03262140.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4042] gi|217328989|ref|ZP_03445070.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. TW14588] gi|254793510|ref|YP_003078347.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. TW14359] gi|261227613|ref|ZP_05941894.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. FRIK2000] gi|261258221|ref|ZP_05950754.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. FRIK966] gi|13362064|dbj|BAB36019.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. Sakai] gi|187768041|gb|EDU31885.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4196] gi|188017376|gb|EDU55498.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4113] gi|188999453|gb|EDU68439.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4076] gi|189355188|gb|EDU73607.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4401] gi|189360314|gb|EDU78733.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4486] gi|189367395|gb|EDU85811.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4501] gi|189370680|gb|EDU89096.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC869] gi|189376035|gb|EDU94451.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC508] gi|208725087|gb|EDZ74794.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4206] gi|208731234|gb|EDZ79923.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4045] gi|208741943|gb|EDZ89625.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4042] gi|209767248|gb|ACI81936.1| methyl-accepting chemotaxis protein II [Escherichia coli] gi|209767250|gb|ACI81937.1| methyl-accepting chemotaxis protein II [Escherichia coli] gi|209767252|gb|ACI81938.1| methyl-accepting chemotaxis protein II [Escherichia coli] gi|209767256|gb|ACI81940.1| methyl-accepting chemotaxis protein II [Escherichia coli] gi|217318336|gb|EEC26763.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. TW14588] gi|254592910|gb|ACT72271.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. TW14359] gi|320188586|gb|EFW63248.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC1212] gi|320641740|gb|EFX11128.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. G5101] gi|320647100|gb|EFX15933.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H- str. 493-89] gi|320652383|gb|EFX20681.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H- str. H 2687] gi|326342264|gb|EGD66045.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. 1044] gi|326343815|gb|EGD67577.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. 1125] Length = 553 Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|333004146|gb|EGK23678.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-272] gi|333017757|gb|EGK37064.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-227] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|323948228|gb|EGB44216.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia coli H120] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|74311764|ref|YP_310183.1| methyl-accepting chemotaxis protein II [Shigella sonnei Ss046] gi|300917531|ref|ZP_07134188.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 115-1] gi|73855241|gb|AAZ87948.1| methyl-accepting chemotaxis protein II [Shigella sonnei Ss046] gi|300415236|gb|EFJ98546.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 115-1] gi|323165318|gb|EFZ51106.1| methyl-accepting chemotaxis protein II [Shigella sonnei 53G] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|16129838|ref|NP_416400.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12 substr. MG1655] gi|89108726|ref|AP_002506.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12 substr. W3110] gi|157161358|ref|YP_001458676.1| methyl-accepting chemotaxis protein II [Escherichia coli HS] gi|170019769|ref|YP_001724723.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli ATCC 8739] gi|170081542|ref|YP_001730862.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12 substr. DH10B] gi|191168086|ref|ZP_03029885.1| methyl-accepting chemotaxis protein II [Escherichia coli B7A] gi|193069871|ref|ZP_03050820.1| methyl-accepting chemotaxis protein II [Escherichia coli E110019] gi|194439084|ref|ZP_03071167.1| methyl-accepting chemotaxis protein II [Escherichia coli 101-1] gi|209919312|ref|YP_002293396.1| methyl-accepting chemotaxis protein II [Escherichia coli SE11] gi|218554474|ref|YP_002387387.1| methyl-accepting chemotaxis protein II [Escherichia coli IAI1] gi|238901101|ref|YP_002926897.1| methyl-accepting chemotaxis protein II [Escherichia coli BW2952] gi|253773157|ref|YP_003035988.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161946|ref|YP_003045054.1| methyl-accepting chemotaxis protein II [Escherichia coli B str. REL606] gi|256022449|ref|ZP_05436314.1| methyl-accepting chemotaxis protein II [Escherichia sp. 4_1_40B] gi|293415201|ref|ZP_06657844.1| methyl-accepting chemotaxis protein II [Escherichia coli B185] gi|300822339|ref|ZP_07102480.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 119-7] gi|300904774|ref|ZP_07122602.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 84-1] gi|300928920|ref|ZP_07144424.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 187-1] gi|300951510|ref|ZP_07165345.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 116-1] gi|300956600|ref|ZP_07168879.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 175-1] gi|301029338|ref|ZP_07192435.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 196-1] gi|301645596|ref|ZP_07245525.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 146-1] gi|307138551|ref|ZP_07497907.1| methyl-accepting chemotaxis protein II [Escherichia coli H736] gi|307314202|ref|ZP_07593812.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli W] gi|309796003|ref|ZP_07690416.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 145-7] gi|331642504|ref|ZP_08343639.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli H736] gi|331668583|ref|ZP_08369431.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli TA271] gi|331677771|ref|ZP_08378446.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli H591] gi|2506837|sp|P07017|MCP2_ECOLI RecName: Full=Methyl-accepting chemotaxis protein II; Short=MCP-II; AltName: Full=Aspartate chemoreceptor protein gi|1736539|dbj|BAA15702.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K12 substr. W3110] gi|1788195|gb|AAC74956.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12 substr. MG1655] gi|157067038|gb|ABV06293.1| methyl-accepting chemotaxis protein II [Escherichia coli HS] gi|169754697|gb|ACA77396.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli ATCC 8739] gi|169889377|gb|ACB03084.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12 substr. DH10B] gi|190901884|gb|EDV61634.1| methyl-accepting chemotaxis protein II [Escherichia coli B7A] gi|192956771|gb|EDV87225.1| methyl-accepting chemotaxis protein II [Escherichia coli E110019] gi|194422043|gb|EDX38047.1| methyl-accepting chemotaxis protein II [Escherichia coli 101-1] gi|209912571|dbj|BAG77645.1| methyl-accepting chemotaxis protein II [Escherichia coli SE11] gi|218361242|emb|CAQ98826.1| methyl-accepting chemotaxis protein II [Escherichia coli IAI1] gi|238861760|gb|ACR63758.1| methyl-accepting chemotaxis protein II [Escherichia coli BW2952] gi|242377607|emb|CAQ32363.1| tar, subunit of MCP-II [Escherichia coli BL21(DE3)] gi|253324201|gb|ACT28803.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973847|gb|ACT39518.1| methyl-accepting chemotaxis protein II [Escherichia coli B str. REL606] gi|253978041|gb|ACT43711.1| methyl-accepting chemotaxis protein II [Escherichia coli BL21(DE3)] gi|260448991|gb|ACX39413.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli DH1] gi|291432849|gb|EFF05828.1| methyl-accepting chemotaxis protein II [Escherichia coli B185] gi|299877764|gb|EFI85975.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 196-1] gi|300316582|gb|EFJ66366.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 175-1] gi|300403288|gb|EFJ86826.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 84-1] gi|300449260|gb|EFK12880.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 116-1] gi|300463074|gb|EFK26567.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 187-1] gi|300525222|gb|EFK46291.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 119-7] gi|301076128|gb|EFK90934.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 146-1] gi|306906171|gb|EFN36689.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli W] gi|308120453|gb|EFO57715.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 145-7] gi|315061192|gb|ADT75519.1| methyl-accepting chemotaxis protein II [Escherichia coli W] gi|315136529|dbj|BAJ43688.1| methyl-accepting chemotaxis protein II [Escherichia coli DH1] gi|315257280|gb|EFU37248.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 85-1] gi|315617888|gb|EFU98486.1| methyl-accepting chemotaxis protein II [Escherichia coli 3431] gi|323174597|gb|EFZ60218.1| methyl-accepting chemotaxis protein II [Escherichia coli LT-68] gi|323186337|gb|EFZ71687.1| methyl-accepting chemotaxis protein II [Escherichia coli 1357] gi|323378231|gb|ADX50499.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli KO11] gi|323937144|gb|EGB33424.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia coli E1520] gi|323940446|gb|EGB36637.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia coli E482] gi|323961941|gb|EGB57540.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia coli H489] gi|323972605|gb|EGB67808.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia coli TA007] gi|324017968|gb|EGB87187.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 117-3] gi|331039302|gb|EGI11522.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli H736] gi|331063777|gb|EGI35688.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli TA271] gi|331074231|gb|EGI45551.1| methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) [Escherichia coli H591] gi|332343613|gb|AEE56947.1| methyl-accepting chemotaxis protein II [Escherichia coli UMNK88] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|320657984|gb|EFX25746.1| methyl-accepting chemotaxis protein II [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658557|gb|EFX26251.1| methyl-accepting chemotaxis protein II [Escherichia coli O55:H7 str. USDA 5905] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|291283068|ref|YP_003499886.1| Methyl-accepting chemotaxis protein II [Escherichia coli O55:H7 str. CB9615] gi|209767254|gb|ACI81939.1| methyl-accepting chemotaxis protein II [Escherichia coli] gi|290762941|gb|ADD56902.1| Methyl-accepting chemotaxis protein II [Escherichia coli O55:H7 str. CB9615] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|209399651|ref|YP_002270970.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4115] gi|209161051|gb|ACI38484.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7 str. EC4115] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|145521|gb|AAA23566.1| methyl-accepting chemotaxis protein II [Escherichia coli] Length = 553 Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|218548512|ref|YP_002382303.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii ATCC 35469] gi|218356053|emb|CAQ88669.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii ATCC 35469] gi|324113667|gb|EGC07642.1| methyl-accepting chemotaxis signaling domain-containing protein [Escherichia fergusonii B253] gi|325496931|gb|EGC94790.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii ECD227] Length = 521 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 12/32 (37%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N + YF P N Sbjct: 128 KNYYAALTELIDFLDYGNTDAYFAQPTQSMQN 159 >gi|332089620|gb|EGI94722.1| methyl-accepting chemotaxis protein II [Shigella boydii 5216-82] Length = 494 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 69 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 100 >gi|157157023|ref|YP_001463192.1| methyl-accepting chemotaxis protein II [Escherichia coli E24377A] gi|157079053|gb|ABV18761.1| methyl-accepting chemotaxis protein II [Escherichia coli E24377A] Length = 553 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|332757446|gb|EGJ87781.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-671] Length = 513 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 88 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119 >gi|309702109|emb|CBJ01424.1| methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) [Escherichia coli ETEC H10407] Length = 553 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|188495919|ref|ZP_03003189.1| methyl-accepting chemotaxis protein II [Escherichia coli 53638] gi|188491118|gb|EDU66221.1| methyl-accepting chemotaxis protein II [Escherichia coli 53638] Length = 553 Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|312969930|ref|ZP_07784113.1| methyl-accepting chemotaxis protein II [Escherichia coli 1827-70] gi|310338215|gb|EFQ03304.1| methyl-accepting chemotaxis protein II [Escherichia coli 1827-70] Length = 513 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 88 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119 >gi|326433889|gb|EGD79459.1| hypothetical protein PTSG_10025 [Salpingoeca sp. ATCC 50818] Length = 6681 Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 9 LGSGNREKDIMMVSHLLALQKEILATFG-----LNNPFVSTTHLYNGIARLAEAVGVQNV 63 LGS ++E D+++++ +L Q+ +L T + L RLAE +G+ + Sbjct: 5415 LGSSSQEPDLVILAAMLKRQERVLQTLAHTKTRPEVGRLMLEQLQQTAQRLAECLGLHDE 5474 Query: 64 NE 65 + Sbjct: 5475 GD 5476 >gi|110805866|ref|YP_689386.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor [Shigella flexneri 5 str. 8401] gi|110615414|gb|ABF04081.1| methyl-accepting chemotaxis protein II [Shigella flexneri 5 str. 8401] Length = 553 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|186915166|gb|ACC95273.1| Tar [Escherichia coli] Length = 168 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146 >gi|301307242|ref|ZP_07213262.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 124-1] gi|300837564|gb|EFK65324.1| methyl-accepting chemotaxis protein signaling domain protein [Escherichia coli MS 124-1] Length = 513 Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 88 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119 >gi|187732383|ref|YP_001880693.1| methyl-accepting chemotaxis protein II [Shigella boydii CDC 3083-94] gi|187429375|gb|ACD08649.1| methyl-accepting chemotaxis protein II [Shigella boydii CDC 3083-94] Length = 472 Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159 >gi|186915090|gb|ACC95235.1| Tar [Escherichia coli] gi|186915108|gb|ACC95244.1| Tar [Escherichia coli] Length = 168 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146 >gi|167583563|ref|YP_001671753.1| portal protein [Enterobacteria phage phiEco32] gi|164375401|gb|ABY52809.1| portal protein [Enterobacteria phage phiEco32] Length = 747 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 2 DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61 + +V + + + + + L K+++A P A++ E +G++ Sbjct: 517 NLQVVVAISPNEKAERAQKLISL----KQLIAADAQLAPLFGLEQDRYMTAQIFELMGIK 572 Query: 62 NVNEYFNNPDSEQ 74 + ++Y + Q Sbjct: 573 DTHKYLLPLEQYQ 585 >gi|186915078|gb|ACC95229.1| Tar [Escherichia coli] gi|186915080|gb|ACC95230.1| Tar [Escherichia coli] gi|186915092|gb|ACC95236.1| Tar [Escherichia coli] gi|186915094|gb|ACC95237.1| Tar [Escherichia coli] gi|186915096|gb|ACC95238.1| Tar [Escherichia coli] gi|186915102|gb|ACC95241.1| Tar [Escherichia coli] gi|186915106|gb|ACC95243.1| Tar [Escherichia coli] gi|186915112|gb|ACC95246.1| Tar [Escherichia coli] gi|186915114|gb|ACC95247.1| Tar [Escherichia coli] gi|186915118|gb|ACC95249.1| Tar [Escherichia coli] gi|186915120|gb|ACC95250.1| Tar [Escherichia coli] gi|186915122|gb|ACC95251.1| Tar [Escherichia coli] gi|186915124|gb|ACC95252.1| Tar [Escherichia coli] gi|186915130|gb|ACC95255.1| Tar [Escherichia coli] gi|186915134|gb|ACC95257.1| Tar [Escherichia coli] gi|186915144|gb|ACC95262.1| Tar [Escherichia coli] gi|186915150|gb|ACC95265.1| Tar [Escherichia coli] gi|186915154|gb|ACC95267.1| Tar [Escherichia coli] gi|186915156|gb|ACC95268.1| Tar [Escherichia coli] gi|186915162|gb|ACC95271.1| Tar [Escherichia coli] gi|186915168|gb|ACC95274.1| Tar [Escherichia coli] gi|186915174|gb|ACC95277.1| Tar [Escherichia coli] gi|186915180|gb|ACC95280.1| Tar [Escherichia coli] gi|186915186|gb|ACC95283.1| Tar [Escherichia coli] gi|186915188|gb|ACC95284.1| Tar [Escherichia coli] gi|186915192|gb|ACC95286.1| Tar [Escherichia coli] gi|186915198|gb|ACC95289.1| Tar [Escherichia coli] gi|186915202|gb|ACC95291.1| Tar [Escherichia coli] gi|186915204|gb|ACC95292.1| Tar [Escherichia coli] gi|186915224|gb|ACC95302.1| Tar [Escherichia coli] gi|186915226|gb|ACC95303.1| Tar [Escherichia coli] gi|186915234|gb|ACC95307.1| Tar [Escherichia coli] gi|186915238|gb|ACC95309.1| Tar [Escherichia coli] gi|186915240|gb|ACC95310.1| Tar [Escherichia coli] gi|186915250|gb|ACC95315.1| Tar [Escherichia coli] gi|186915256|gb|ACC95318.1| Tar [Escherichia coli] gi|186915258|gb|ACC95319.1| Tar [Escherichia coli] gi|186915260|gb|ACC95320.1| Tar [Escherichia coli] gi|186915272|gb|ACC95326.1| Tar [Escherichia coli] gi|186915276|gb|ACC95328.1| Tar [Escherichia coli] gi|186915282|gb|ACC95331.1| Tar [Escherichia coli] Length = 168 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146 >gi|186915268|gb|ACC95324.1| Tar [Escherichia coli] Length = 168 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146 >gi|186915274|gb|ACC95327.1| Tar [Escherichia coli] Length = 168 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146 >gi|320177404|gb|EFW52405.1| methyl-accepting chemotaxis protein II [Shigella dysenteriae CDC 74-1112] Length = 428 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 88 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119 >gi|308508315|ref|XP_003116341.1| hypothetical protein CRE_08980 [Caenorhabditis remanei] gi|308251285|gb|EFO95237.1| hypothetical protein CRE_08980 [Caenorhabditis remanei] Length = 1371 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 9 LGSGNREKDIMMVSHLLALQKEILATFGLNNPF--VSTTHLYNGIARLAEAVGVQNVNEY 66 LG G+ E+ I + ++L ++ A G N+ S +Y G +N E+ Sbjct: 145 LGVGSNEETINELRNVLLDEEIDKAYIGPNHSIFVTSEKGIYAAGKASNFLEGYENSEEF 204 Query: 67 FNNP 70 F +P Sbjct: 205 FTSP 208 >gi|157834627|pdb|2ASR|A Chain A, The Three-Dimensional Structure Of The Aspartate Receptor From Escherichia Coli Length = 142 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 11/32 (34%) Query: 45 THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76 + Y + L + + N YF P N Sbjct: 91 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 122 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.310 0.157 0.440 Lambda K H 0.267 0.0482 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 853,282,683 Number of Sequences: 14124377 Number of extensions: 28426125 Number of successful extensions: 236951 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 236419 Number of HSP's gapped (non-prelim): 499 length of query: 76 length of database: 4,842,793,630 effective HSP length: 47 effective length of query: 29 effective length of database: 4,178,947,911 effective search space: 121189489419 effective search space used: 121189489419 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 76 (33.7 bits)