BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781144|ref|YP_003065557.1| hypothetical protein
CLIBASIA_05240 [Candidatus Liberibacter asiaticus str. psy62]
         (76 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|227822448|ref|YP_002826420.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234]
 gi|227341449|gb|ACP25667.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234]
          Length = 684

 Score = 99.1 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/74 (48%), Positives = 53/74 (71%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           MDA VN GLG+G RE+D+MM+  +  LQ+++L T G +NP+VS  +LYNGIA+  EA G+
Sbjct: 517 MDATVNTGLGAGTRERDMMMIQMIQQLQEKLLMTLGPDNPYVSPDNLYNGIAKSVEAAGL 576

Query: 61  QNVNEYFNNPDSEQ 74
           ++ + YF  P  E+
Sbjct: 577 KSPDLYFTKPTPEE 590


>gi|150397041|ref|YP_001327508.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419]
 gi|150028556|gb|ABR60673.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419]
          Length = 683

 Score = 97.6 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 53/74 (71%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           MDA +N GLG+G RE+D+MM+  +L LQ+++L   G +NP+VS  +LYNGIA+  EA G+
Sbjct: 516 MDATINTGLGAGTRERDMMMIQMILQLQEKLLMALGPDNPYVSPDNLYNGIAKSVEAAGL 575

Query: 61  QNVNEYFNNPDSEQ 74
           ++ + YF  P  E+
Sbjct: 576 KSPDLYFTKPAPEE 589


>gi|291334599|gb|ADD94249.1| hypothetical protein Daci_1943 [uncultured phage
           MedDCM-OCT-S04-C136]
          Length = 741

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILA-TFGLNNPFVSTTHLYNGIARLAEAVGV 60
           +  + +GLG+G++E+  +M++ +L  Q +      G   P V+  ++YN + ++ E  G+
Sbjct: 537 NISIVVGLGTGSKEQQTIMLNSILERQLQAFQIQGGKEMPMVNLKNMYNTLTKMVENAGL 596

Query: 61  QNVNEYFNNPDSEQ 74
           +NV  YF +PD  +
Sbjct: 597 KNVETYFVDPDVGK 610


>gi|227822445|ref|YP_002826417.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234]
 gi|227341446|gb|ACP25664.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234]
          Length = 361

 Score = 91.8 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/74 (48%), Positives = 53/74 (71%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           MDA VN GLG+G RE+D+MM+  +  LQ+++L T G +NP+VS  +LYNGIA+  EA G+
Sbjct: 194 MDATVNTGLGAGTRERDMMMIQMIQQLQEKLLMTLGPDNPYVSPDNLYNGIAKSVEAAGL 253

Query: 61  QNVNEYFNNPDSEQ 74
           ++ + YF  P  E+
Sbjct: 254 KSPDLYFTKPTPEE 267


>gi|254781144|ref|YP_003065557.1| hypothetical protein CLIBASIA_05240 [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040821|gb|ACT57617.1| hypothetical protein CLIBASIA_05240 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 76

 Score = 86.8 bits (214), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
          MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV
Sbjct: 1  MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60

Query: 61 QNVNEYFNNPDSEQWN 76
          QNVNEYFNNPDSEQWN
Sbjct: 61 QNVNEYFNNPDSEQWN 76


>gi|315122535|ref|YP_004063024.1| hypothetical protein CKC_03935 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495937|gb|ADR52536.1| hypothetical protein CKC_03935 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 637

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/71 (84%), Positives = 67/71 (94%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           MDAKVNIGLGSG+REKD MM+SHLL LQKEILATFG+NNPFVS+T+LYNGIARLAE++GV
Sbjct: 503 MDAKVNIGLGSGSREKDTMMISHLLGLQKEILATFGINNPFVSSTNLYNGIARLAESIGV 562

Query: 61  QNVNEYFNNPD 71
           QNVNEYF  PD
Sbjct: 563 QNVNEYFTRPD 573


>gi|27476052|ref|NP_775254.1| putative portal protein [Pseudomonas phage PaP3]
 gi|27414482|gb|AAL85568.1| ORF.04 [Pseudomonas phage PaP3]
          Length = 705

 Score = 76.4 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  V +G+G+ N+++ ++ +  +  +  + +   G     VS  +LYN +  + E  G +
Sbjct: 512 DLTVTVGIGNMNKDQQMLHLMRIWEMA-QAVVGGGGLGVLVSEQNLYNILKEVTENAGYK 570

Query: 62  NVNEYFNNPDSEQ 74
           + + ++ NP+S +
Sbjct: 571 DPDRFWTNPNSPE 583


>gi|148257059|ref|YP_001241644.1| hypothetical protein BBta_5791 [Bradyrhizobium sp. BTAi1]
 gi|146409232|gb|ABQ37738.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 557

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  + +GLGSG + +       +  +QKE++    +N   V    LYN  A L   +G +
Sbjct: 356 DMTIEVGLGSGGKAQQFAQTMAIANVQKELVMAGKVN--LVGDRELYNTAAELTRIMGHK 413

Query: 62  NVNEYFNNPDS 72
           N   +FN+P +
Sbjct: 414 NPGRFFNDPAA 424


>gi|167600438|ref|YP_001671938.1| portal protein [Pseudomonas phage LUZ24]
 gi|161168301|emb|CAP45466.1| portal protein [Pseudomonas phage LUZ24]
          Length = 706

 Score = 75.6 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  V +G+G+ N+++ ++ +  +  +  + +   G     VS  +LYN +  + E  G +
Sbjct: 513 DLTVTVGIGNMNKDQQMLHLMRIWEMA-QAVVGGGGLGVLVSEQNLYNILKEVTENAGYK 571

Query: 62  NVNEYFNNPDSEQ 74
           + + ++ NPDS +
Sbjct: 572 DPDHFWTNPDSPE 584


>gi|160897386|ref|YP_001562968.1| hypothetical protein Daci_1943 [Delftia acidovorans SPH-1]
 gi|160362970|gb|ABX34583.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 763

 Score = 71.8 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           +A +N+GLG+G++++ +  +  +   Q     T GL     +  ++Y   A+L +AVG +
Sbjct: 560 NATINVGLGTGSKDQLVQQLMMIGQQQ-----TLGLQIGTATPKNVYETQAQLTKAVGFK 614

Query: 62  NVNEYFNN 69
           + +++F +
Sbjct: 615 SPDKFFVD 622


>gi|307308935|ref|ZP_07588618.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti
           BL225C]
 gi|306900569|gb|EFN31182.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti
           BL225C]
          Length = 677

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D   ++  G  +R++ +  +++LLA Q + LA      P V+  +++N +A+L E  G +
Sbjct: 517 DVTTSVAFGVMSRDQSMASLNNLLAQQYQALAQGL---PIVNAQNIFNTVAKLTELSGYK 573

Query: 62  NVNEYF 67
           N   ++
Sbjct: 574 NTAAHW 579


>gi|241760934|ref|ZP_04759023.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374553|gb|EER64014.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 729

 Score = 68.7 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           M  +V +GLGSG +++ +     LL++Q++ LA          +  +YN IA +    G+
Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571

Query: 61  QNVNEYFNNPD 71
            N  +Y  +PD
Sbjct: 572 GNPTDYLIDPD 582


>gi|56551276|ref|YP_162115.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542850|gb|AAV89004.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 729

 Score = 68.7 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           M  +V +GLGSG +++ +     LL++Q++ LA          +  +YN IA +    G+
Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571

Query: 61  QNVNEYFNNPD 71
            N  +Y  +PD
Sbjct: 572 GNPTDYLIDPD 582


>gi|260753098|ref|YP_003225991.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552461|gb|ACV75407.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 729

 Score = 68.7 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 1   MDAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGV 60
           M  +V +GLGSG +++ +     LL++Q++ LA          +  +YN IA +    G+
Sbjct: 517 MRVRVTVGLGSGRKDQRLAYRQQLLSIQQQALAV-----GLTGSKQIYNNIAAMIRDCGL 571

Query: 61  QNVNEYFNNPD 71
            N  +Y  +PD
Sbjct: 572 GNPTDYLIDPD 582


>gi|288817860|ref|YP_003432207.1| putative portal protein [Hydrogenobacter thermophilus TK-6]
 gi|288787259|dbj|BAI69006.1| putative portal protein [Hydrogenobacter thermophilus TK-6]
          Length = 618

 Score = 65.2 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  ++ G+G G ++ ++             L    L     +  ++YN + +L E +G +
Sbjct: 514 DVVISAGIGVGTKQTNMAN-----LQLLLQLYPKLLQLGIATPKNVYNLVKKLIEEMGYK 568

Query: 62  NVNEYFNNPDSEQ 74
           NV+++  +P+  Q
Sbjct: 569 NVDDFLQDPEQAQ 581


>gi|308751459|gb|ADO44942.1| hypothetical protein Hydth_0542 [Hydrogenobacter thermophilus TK-6]
          Length = 618

 Score = 63.3 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  ++ G+G G ++ ++             L    L     +  ++YN +  L E +G +
Sbjct: 514 DVVISAGIGVGTKQTNMAN-----LQLLLQLYPKLLQLGIATPKNVYNLVKNLIEEMGYK 568

Query: 62  NVNEYFNNPDSEQ 74
           NV+++  +P+  Q
Sbjct: 569 NVDDFLQDPEQAQ 581


>gi|291334641|gb|ADD94289.1| portal protein [uncultured phage MedDCM-OCT-S04-C64]
          Length = 755

 Score = 62.2 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           +  V +G+GS +RE+ ++ +  ++A Q E++A  G+    V    +Y  +  +A+  G+Q
Sbjct: 517 NTSVQVGVGSVSRERRMVALETIMAKQNELIANGGM-GTLVQPFQVYQTLRDIADGFGLQ 575

Query: 62  NVNEYFNNP 70
               YF +P
Sbjct: 576 -PQAYFTDP 583


>gi|221199509|ref|ZP_03572553.1| putative portal protein [Burkholderia multivorans CGD2M]
 gi|221205589|ref|ZP_03578604.1| putative portal protein [Burkholderia multivorans CGD2]
 gi|221174427|gb|EEE06859.1| putative portal protein [Burkholderia multivorans CGD2]
 gi|221180794|gb|EEE13197.1| putative portal protein [Burkholderia multivorans CGD2M]
          Length = 807

 Score = 61.8 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 3   AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLN-NPFVSTTHLYNGIARLAEAVGVQ 61
            KV +G G+G+  + +  ++ L  +Q+ +  +        V+  +L   +  + +A+ + 
Sbjct: 605 MKVVVGTGTGDMTERVAHLTQLFGMQQTLAQSPNPQIAGMVTPQNLQRTVHEIVKALQLG 664

Query: 62  NVNEYFNN 69
             + + ++
Sbjct: 665 EPSMFVSD 672


>gi|291334835|gb|ADD94475.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041]
          Length = 223

 Score = 37.9 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 18 IMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQNVNEYFNNP 70
          ++ +  ++A Q E++A  G+    V    +Y  +  + +  G+Q    YF +P
Sbjct: 1  MVALETIMAKQNELIANGGM-GTLVQPFQVYQTLRDITDGFGLQ-PQAYFTDP 51


>gi|294083946|ref|YP_003550703.1| putative portal protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663518|gb|ADE38619.1| putative portal protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 697

 Score = 37.5 bits (86), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           D  V + LG G ++ +   +  L      + +      P     + +  + ++ E  G+ 
Sbjct: 532 DVMVELKLGYGEQDAEAQKMLAL----HTLFSQDPNIQPMYGMENRFAMLKKILEQQGIL 587

Query: 62  NVNEYFN 68
           NV E+  
Sbjct: 588 NVEEFLT 594


>gi|254426466|ref|ZP_05040181.1| hypothetical protein S7335_1149 [Synechococcus sp. PCC 7335]
 gi|196187478|gb|EDX82445.1| hypothetical protein S7335_1149 [Synechococcus sp. PCC 7335]
          Length = 1175

 Score = 36.4 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 17  DIMMVSHLLALQKEILATFG--LNNPFVSTTHLYNGIARLAEAVGVQ 61
            +  +   L +Q  +L   G  ++NP V     YN +A + E +G Q
Sbjct: 228 QLKAMCQALGVQMLVLNPDGGAVSNPLVMRQ--YNALAEIVEGLGYQ 272


>gi|221271428|dbj|BAH15181.1| portal protein [Serratia phage KSP100]
          Length = 374

 Score = 36.0 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 3   AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQN 62
             V + +G   R +    +  L      + A   L+    +  +  +    L  A+G  +
Sbjct: 159 VIVAVAIGQNERRERANNLVQLSQF---LTANPLLSGTTFTAENANHLARELTLAMGFYD 215

Query: 63  VNEYFNNPDSEQ 74
           VN +    +  Q
Sbjct: 216 VNNFITPMEQVQ 227


>gi|316934283|ref|YP_004109265.1| putative portal protein [Rhodopseudomonas palustris DX-1]
 gi|315601997|gb|ADU44532.1| putative portal protein [Rhodopseudomonas palustris DX-1]
          Length = 673

 Score = 36.0 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 3   AKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQN 62
            +V++ +G G +EK+    + L  +    L+T    + F      Y  +    +  G QN
Sbjct: 508 VQVSLHVGYGEQEKEAARYAQLWGM----LSTDPKASMFCPPDKQYKLLTDGMKKNGFQN 563

Query: 63  VNEYFNNPDSEQ 74
            ++Y   PD  +
Sbjct: 564 FSDYLIPPDQVK 575


>gi|297519728|ref|ZP_06938114.1| methyl-accepting chemotaxis protein II [Escherichia coli OP50]
          Length = 305

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|30063338|ref|NP_837509.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 2a str. 2457T]
 gi|56479995|ref|NP_707781.2| methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 2a str. 301]
 gi|30041590|gb|AAP17318.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 2a str. 2457T]
 gi|56383546|gb|AAN43488.2| methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 2a str. 301]
 gi|281601333|gb|ADA74317.1| Methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 2002017]
 gi|313650101|gb|EFS14514.1| methyl-accepting chemotaxis protein II [Shigella flexneri 2a str.
           2457T]
 gi|332757347|gb|EGJ87684.1| methyl-accepting chemotaxis protein II [Shigella flexneri 2747-71]
 gi|332766617|gb|EGJ96821.1| tsr [Shigella flexneri 2930-71]
 gi|333017675|gb|EGK36987.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-304]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|218695452|ref|YP_002403119.1| methyl-accepting chemotaxis protein II [Escherichia coli 55989]
 gi|218352184|emb|CAU97923.1| methyl-accepting chemotaxis protein II [Escherichia coli 55989]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|320668455|gb|EFX35282.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. LSU-61]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|15802298|ref|NP_288323.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           EDL933]
 gi|12515948|gb|AAG56876.1|AE005410_12 methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Escherichia coli O157:H7 str. EDL933]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|15831850|ref|NP_310623.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. Sakai]
 gi|168747917|ref|ZP_02772939.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4113]
 gi|168757925|ref|ZP_02782932.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4401]
 gi|168762316|ref|ZP_02787323.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4501]
 gi|168770873|ref|ZP_02795880.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4486]
 gi|168776563|ref|ZP_02801570.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4196]
 gi|168783190|ref|ZP_02808197.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4076]
 gi|168789755|ref|ZP_02814762.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC869]
 gi|168801874|ref|ZP_02826881.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC508]
 gi|195939590|ref|ZP_03084972.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4024]
 gi|208810571|ref|ZP_03252447.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4206]
 gi|208816891|ref|ZP_03258011.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4045]
 gi|208821820|ref|ZP_03262140.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4042]
 gi|217328989|ref|ZP_03445070.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. TW14588]
 gi|254793510|ref|YP_003078347.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. TW14359]
 gi|261227613|ref|ZP_05941894.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261258221|ref|ZP_05950754.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. FRIK966]
 gi|13362064|dbj|BAB36019.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. Sakai]
 gi|187768041|gb|EDU31885.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4196]
 gi|188017376|gb|EDU55498.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4113]
 gi|188999453|gb|EDU68439.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4076]
 gi|189355188|gb|EDU73607.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4401]
 gi|189360314|gb|EDU78733.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4486]
 gi|189367395|gb|EDU85811.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4501]
 gi|189370680|gb|EDU89096.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC869]
 gi|189376035|gb|EDU94451.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC508]
 gi|208725087|gb|EDZ74794.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4206]
 gi|208731234|gb|EDZ79923.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4045]
 gi|208741943|gb|EDZ89625.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4042]
 gi|209767248|gb|ACI81936.1| methyl-accepting chemotaxis protein II [Escherichia coli]
 gi|209767250|gb|ACI81937.1| methyl-accepting chemotaxis protein II [Escherichia coli]
 gi|209767252|gb|ACI81938.1| methyl-accepting chemotaxis protein II [Escherichia coli]
 gi|209767256|gb|ACI81940.1| methyl-accepting chemotaxis protein II [Escherichia coli]
 gi|217318336|gb|EEC26763.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. TW14588]
 gi|254592910|gb|ACT72271.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. TW14359]
 gi|320188586|gb|EFW63248.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC1212]
 gi|320641740|gb|EFX11128.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. G5101]
 gi|320647100|gb|EFX15933.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H-
           str. 493-89]
 gi|320652383|gb|EFX20681.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H-
           str. H 2687]
 gi|326342264|gb|EGD66045.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. 1044]
 gi|326343815|gb|EGD67577.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. 1125]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|333004146|gb|EGK23678.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-272]
 gi|333017757|gb|EGK37064.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-227]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|323948228|gb|EGB44216.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia coli H120]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|74311764|ref|YP_310183.1| methyl-accepting chemotaxis protein II [Shigella sonnei Ss046]
 gi|300917531|ref|ZP_07134188.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 115-1]
 gi|73855241|gb|AAZ87948.1| methyl-accepting chemotaxis protein II [Shigella sonnei Ss046]
 gi|300415236|gb|EFJ98546.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 115-1]
 gi|323165318|gb|EFZ51106.1| methyl-accepting chemotaxis protein II [Shigella sonnei 53G]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|16129838|ref|NP_416400.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12
           substr. MG1655]
 gi|89108726|ref|AP_002506.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12
           substr. W3110]
 gi|157161358|ref|YP_001458676.1| methyl-accepting chemotaxis protein II [Escherichia coli HS]
 gi|170019769|ref|YP_001724723.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           ATCC 8739]
 gi|170081542|ref|YP_001730862.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12
           substr. DH10B]
 gi|191168086|ref|ZP_03029885.1| methyl-accepting chemotaxis protein II [Escherichia coli B7A]
 gi|193069871|ref|ZP_03050820.1| methyl-accepting chemotaxis protein II [Escherichia coli E110019]
 gi|194439084|ref|ZP_03071167.1| methyl-accepting chemotaxis protein II [Escherichia coli 101-1]
 gi|209919312|ref|YP_002293396.1| methyl-accepting chemotaxis protein II [Escherichia coli SE11]
 gi|218554474|ref|YP_002387387.1| methyl-accepting chemotaxis protein II [Escherichia coli IAI1]
 gi|238901101|ref|YP_002926897.1| methyl-accepting chemotaxis protein II [Escherichia coli BW2952]
 gi|253773157|ref|YP_003035988.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161946|ref|YP_003045054.1| methyl-accepting chemotaxis protein II [Escherichia coli B str.
           REL606]
 gi|256022449|ref|ZP_05436314.1| methyl-accepting chemotaxis protein II [Escherichia sp. 4_1_40B]
 gi|293415201|ref|ZP_06657844.1| methyl-accepting chemotaxis protein II [Escherichia coli B185]
 gi|300822339|ref|ZP_07102480.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 119-7]
 gi|300904774|ref|ZP_07122602.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 84-1]
 gi|300928920|ref|ZP_07144424.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 187-1]
 gi|300951510|ref|ZP_07165345.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 116-1]
 gi|300956600|ref|ZP_07168879.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 175-1]
 gi|301029338|ref|ZP_07192435.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 196-1]
 gi|301645596|ref|ZP_07245525.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 146-1]
 gi|307138551|ref|ZP_07497907.1| methyl-accepting chemotaxis protein II [Escherichia coli H736]
 gi|307314202|ref|ZP_07593812.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli W]
 gi|309796003|ref|ZP_07690416.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 145-7]
 gi|331642504|ref|ZP_08343639.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli H736]
 gi|331668583|ref|ZP_08369431.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli
           TA271]
 gi|331677771|ref|ZP_08378446.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli H591]
 gi|2506837|sp|P07017|MCP2_ECOLI RecName: Full=Methyl-accepting chemotaxis protein II; Short=MCP-II;
           AltName: Full=Aspartate chemoreceptor protein
 gi|1736539|dbj|BAA15702.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K12
           substr. W3110]
 gi|1788195|gb|AAC74956.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12
           substr. MG1655]
 gi|157067038|gb|ABV06293.1| methyl-accepting chemotaxis protein II [Escherichia coli HS]
 gi|169754697|gb|ACA77396.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           ATCC 8739]
 gi|169889377|gb|ACB03084.1| methyl-accepting chemotaxis protein II [Escherichia coli str. K-12
           substr. DH10B]
 gi|190901884|gb|EDV61634.1| methyl-accepting chemotaxis protein II [Escherichia coli B7A]
 gi|192956771|gb|EDV87225.1| methyl-accepting chemotaxis protein II [Escherichia coli E110019]
 gi|194422043|gb|EDX38047.1| methyl-accepting chemotaxis protein II [Escherichia coli 101-1]
 gi|209912571|dbj|BAG77645.1| methyl-accepting chemotaxis protein II [Escherichia coli SE11]
 gi|218361242|emb|CAQ98826.1| methyl-accepting chemotaxis protein II [Escherichia coli IAI1]
 gi|238861760|gb|ACR63758.1| methyl-accepting chemotaxis protein II [Escherichia coli BW2952]
 gi|242377607|emb|CAQ32363.1| tar, subunit of MCP-II [Escherichia coli BL21(DE3)]
 gi|253324201|gb|ACT28803.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973847|gb|ACT39518.1| methyl-accepting chemotaxis protein II [Escherichia coli B str.
           REL606]
 gi|253978041|gb|ACT43711.1| methyl-accepting chemotaxis protein II [Escherichia coli BL21(DE3)]
 gi|260448991|gb|ACX39413.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           DH1]
 gi|291432849|gb|EFF05828.1| methyl-accepting chemotaxis protein II [Escherichia coli B185]
 gi|299877764|gb|EFI85975.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 196-1]
 gi|300316582|gb|EFJ66366.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 175-1]
 gi|300403288|gb|EFJ86826.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 84-1]
 gi|300449260|gb|EFK12880.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 116-1]
 gi|300463074|gb|EFK26567.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 187-1]
 gi|300525222|gb|EFK46291.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 119-7]
 gi|301076128|gb|EFK90934.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 146-1]
 gi|306906171|gb|EFN36689.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli W]
 gi|308120453|gb|EFO57715.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 145-7]
 gi|315061192|gb|ADT75519.1| methyl-accepting chemotaxis protein II [Escherichia coli W]
 gi|315136529|dbj|BAJ43688.1| methyl-accepting chemotaxis protein II [Escherichia coli DH1]
 gi|315257280|gb|EFU37248.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 85-1]
 gi|315617888|gb|EFU98486.1| methyl-accepting chemotaxis protein II [Escherichia coli 3431]
 gi|323174597|gb|EFZ60218.1| methyl-accepting chemotaxis protein II [Escherichia coli LT-68]
 gi|323186337|gb|EFZ71687.1| methyl-accepting chemotaxis protein II [Escherichia coli 1357]
 gi|323378231|gb|ADX50499.1| methyl-accepting chemotaxis sensory transducer [Escherichia coli
           KO11]
 gi|323937144|gb|EGB33424.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia coli E1520]
 gi|323940446|gb|EGB36637.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia coli E482]
 gi|323961941|gb|EGB57540.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia coli H489]
 gi|323972605|gb|EGB67808.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia coli TA007]
 gi|324017968|gb|EGB87187.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 117-3]
 gi|331039302|gb|EGI11522.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli H736]
 gi|331063777|gb|EGI35688.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli
           TA271]
 gi|331074231|gb|EGI45551.1| methyl-accepting chemotaxis protein II (MCP-II)
           (Aspartatechemoreceptor protein) [Escherichia coli H591]
 gi|332343613|gb|AEE56947.1| methyl-accepting chemotaxis protein II [Escherichia coli UMNK88]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|320657984|gb|EFX25746.1| methyl-accepting chemotaxis protein II [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320658557|gb|EFX26251.1| methyl-accepting chemotaxis protein II [Escherichia coli O55:H7
           str. USDA 5905]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|291283068|ref|YP_003499886.1| Methyl-accepting chemotaxis protein II [Escherichia coli O55:H7
           str. CB9615]
 gi|209767254|gb|ACI81939.1| methyl-accepting chemotaxis protein II [Escherichia coli]
 gi|290762941|gb|ADD56902.1| Methyl-accepting chemotaxis protein II [Escherichia coli O55:H7
           str. CB9615]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|209399651|ref|YP_002270970.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4115]
 gi|209161051|gb|ACI38484.1| methyl-accepting chemotaxis protein II [Escherichia coli O157:H7
           str. EC4115]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|145521|gb|AAA23566.1| methyl-accepting chemotaxis protein II [Escherichia coli]
          Length = 553

 Score = 35.2 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|218548512|ref|YP_002382303.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii ATCC
           35469]
 gi|218356053|emb|CAQ88669.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii ATCC
           35469]
 gi|324113667|gb|EGC07642.1| methyl-accepting chemotaxis signaling domain-containing protein
           [Escherichia fergusonii B253]
 gi|325496931|gb|EGC94790.1| methyl-accepting chemotaxis protein II [Escherichia fergusonii
           ECD227]
          Length = 521

 Score = 34.8 bits (79), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N + YF  P     N
Sbjct: 128 KNYYAALTELIDFLDYGNTDAYFAQPTQSMQN 159


>gi|332089620|gb|EGI94722.1| methyl-accepting chemotaxis protein II [Shigella boydii 5216-82]
          Length = 494

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 69  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 100


>gi|157157023|ref|YP_001463192.1| methyl-accepting chemotaxis protein II [Escherichia coli E24377A]
 gi|157079053|gb|ABV18761.1| methyl-accepting chemotaxis protein II [Escherichia coli E24377A]
          Length = 553

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|332757446|gb|EGJ87781.1| methyl-accepting chemotaxis protein II [Shigella flexneri K-671]
          Length = 513

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 88  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119


>gi|309702109|emb|CBJ01424.1| methyl-accepting chemotaxis protein II (aspartate chemoreceptor
           protein) [Escherichia coli ETEC H10407]
          Length = 553

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|188495919|ref|ZP_03003189.1| methyl-accepting chemotaxis protein II [Escherichia coli 53638]
 gi|188491118|gb|EDU66221.1| methyl-accepting chemotaxis protein II [Escherichia coli 53638]
          Length = 553

 Score = 34.8 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|312969930|ref|ZP_07784113.1| methyl-accepting chemotaxis protein II [Escherichia coli 1827-70]
 gi|310338215|gb|EFQ03304.1| methyl-accepting chemotaxis protein II [Escherichia coli 1827-70]
          Length = 513

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 88  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119


>gi|326433889|gb|EGD79459.1| hypothetical protein PTSG_10025 [Salpingoeca sp. ATCC 50818]
          Length = 6681

 Score = 34.8 bits (79), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 9    LGSGNREKDIMMVSHLLALQKEILATFG-----LNNPFVSTTHLYNGIARLAEAVGVQNV 63
            LGS ++E D+++++ +L  Q+ +L T            +    L     RLAE +G+ + 
Sbjct: 5415 LGSSSQEPDLVILAAMLKRQERVLQTLAHTKTRPEVGRLMLEQLQQTAQRLAECLGLHDE 5474

Query: 64   NE 65
             +
Sbjct: 5475 GD 5476


>gi|110805866|ref|YP_689386.1| methyl-accepting chemotaxis protein II, aspartate sensor receptor
           [Shigella flexneri 5 str. 8401]
 gi|110615414|gb|ABF04081.1| methyl-accepting chemotaxis protein II [Shigella flexneri 5 str.
           8401]
          Length = 553

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|186915166|gb|ACC95273.1| Tar [Escherichia coli]
          Length = 168

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146


>gi|301307242|ref|ZP_07213262.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 124-1]
 gi|300837564|gb|EFK65324.1| methyl-accepting chemotaxis protein signaling domain protein
           [Escherichia coli MS 124-1]
          Length = 513

 Score = 34.8 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 88  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119


>gi|187732383|ref|YP_001880693.1| methyl-accepting chemotaxis protein II [Shigella boydii CDC
           3083-94]
 gi|187429375|gb|ACD08649.1| methyl-accepting chemotaxis protein II [Shigella boydii CDC
           3083-94]
          Length = 472

 Score = 34.8 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 128 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 159


>gi|186915090|gb|ACC95235.1| Tar [Escherichia coli]
 gi|186915108|gb|ACC95244.1| Tar [Escherichia coli]
          Length = 168

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146


>gi|167583563|ref|YP_001671753.1| portal protein [Enterobacteria phage phiEco32]
 gi|164375401|gb|ABY52809.1| portal protein [Enterobacteria phage phiEco32]
          Length = 747

 Score = 34.4 bits (78), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 2   DAKVNIGLGSGNREKDIMMVSHLLALQKEILATFGLNNPFVSTTHLYNGIARLAEAVGVQ 61
           + +V + +    + +    +  L    K+++A      P           A++ E +G++
Sbjct: 517 NLQVVVAISPNEKAERAQKLISL----KQLIAADAQLAPLFGLEQDRYMTAQIFELMGIK 572

Query: 62  NVNEYFNNPDSEQ 74
           + ++Y    +  Q
Sbjct: 573 DTHKYLLPLEQYQ 585


>gi|186915078|gb|ACC95229.1| Tar [Escherichia coli]
 gi|186915080|gb|ACC95230.1| Tar [Escherichia coli]
 gi|186915092|gb|ACC95236.1| Tar [Escherichia coli]
 gi|186915094|gb|ACC95237.1| Tar [Escherichia coli]
 gi|186915096|gb|ACC95238.1| Tar [Escherichia coli]
 gi|186915102|gb|ACC95241.1| Tar [Escherichia coli]
 gi|186915106|gb|ACC95243.1| Tar [Escherichia coli]
 gi|186915112|gb|ACC95246.1| Tar [Escherichia coli]
 gi|186915114|gb|ACC95247.1| Tar [Escherichia coli]
 gi|186915118|gb|ACC95249.1| Tar [Escherichia coli]
 gi|186915120|gb|ACC95250.1| Tar [Escherichia coli]
 gi|186915122|gb|ACC95251.1| Tar [Escherichia coli]
 gi|186915124|gb|ACC95252.1| Tar [Escherichia coli]
 gi|186915130|gb|ACC95255.1| Tar [Escherichia coli]
 gi|186915134|gb|ACC95257.1| Tar [Escherichia coli]
 gi|186915144|gb|ACC95262.1| Tar [Escherichia coli]
 gi|186915150|gb|ACC95265.1| Tar [Escherichia coli]
 gi|186915154|gb|ACC95267.1| Tar [Escherichia coli]
 gi|186915156|gb|ACC95268.1| Tar [Escherichia coli]
 gi|186915162|gb|ACC95271.1| Tar [Escherichia coli]
 gi|186915168|gb|ACC95274.1| Tar [Escherichia coli]
 gi|186915174|gb|ACC95277.1| Tar [Escherichia coli]
 gi|186915180|gb|ACC95280.1| Tar [Escherichia coli]
 gi|186915186|gb|ACC95283.1| Tar [Escherichia coli]
 gi|186915188|gb|ACC95284.1| Tar [Escherichia coli]
 gi|186915192|gb|ACC95286.1| Tar [Escherichia coli]
 gi|186915198|gb|ACC95289.1| Tar [Escherichia coli]
 gi|186915202|gb|ACC95291.1| Tar [Escherichia coli]
 gi|186915204|gb|ACC95292.1| Tar [Escherichia coli]
 gi|186915224|gb|ACC95302.1| Tar [Escherichia coli]
 gi|186915226|gb|ACC95303.1| Tar [Escherichia coli]
 gi|186915234|gb|ACC95307.1| Tar [Escherichia coli]
 gi|186915238|gb|ACC95309.1| Tar [Escherichia coli]
 gi|186915240|gb|ACC95310.1| Tar [Escherichia coli]
 gi|186915250|gb|ACC95315.1| Tar [Escherichia coli]
 gi|186915256|gb|ACC95318.1| Tar [Escherichia coli]
 gi|186915258|gb|ACC95319.1| Tar [Escherichia coli]
 gi|186915260|gb|ACC95320.1| Tar [Escherichia coli]
 gi|186915272|gb|ACC95326.1| Tar [Escherichia coli]
 gi|186915276|gb|ACC95328.1| Tar [Escherichia coli]
 gi|186915282|gb|ACC95331.1| Tar [Escherichia coli]
          Length = 168

 Score = 34.4 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146


>gi|186915268|gb|ACC95324.1| Tar [Escherichia coli]
          Length = 168

 Score = 34.4 bits (78), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146


>gi|186915274|gb|ACC95327.1| Tar [Escherichia coli]
          Length = 168

 Score = 34.4 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 115 KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 146


>gi|320177404|gb|EFW52405.1| methyl-accepting chemotaxis protein II [Shigella dysenteriae CDC
           74-1112]
          Length = 428

 Score = 34.0 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 88  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 119


>gi|308508315|ref|XP_003116341.1| hypothetical protein CRE_08980 [Caenorhabditis remanei]
 gi|308251285|gb|EFO95237.1| hypothetical protein CRE_08980 [Caenorhabditis remanei]
          Length = 1371

 Score = 34.0 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 9   LGSGNREKDIMMVSHLLALQKEILATFGLNNPF--VSTTHLYNGIARLAEAVGVQNVNEY 66
           LG G+ E+ I  + ++L  ++   A  G N+     S   +Y          G +N  E+
Sbjct: 145 LGVGSNEETINELRNVLLDEEIDKAYIGPNHSIFVTSEKGIYAAGKASNFLEGYENSEEF 204

Query: 67  FNNP 70
           F +P
Sbjct: 205 FTSP 208


>gi|157834627|pdb|2ASR|A Chain A, The Three-Dimensional Structure Of The Aspartate Receptor
           From Escherichia Coli
          Length = 142

 Score = 33.7 bits (76), Expect = 8.2,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 45  THLYNGIARLAEAVGVQNVNEYFNNPDSEQWN 76
            + Y  +  L + +   N   YF  P     N
Sbjct: 91  KNYYTALTELIDYLDYGNTGAYFAQPTQGMQN 122


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.157    0.440 

Lambda     K      H
   0.267   0.0482    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 853,282,683
Number of Sequences: 14124377
Number of extensions: 28426125
Number of successful extensions: 236951
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 236419
Number of HSP's gapped (non-prelim): 499
length of query: 76
length of database: 4,842,793,630
effective HSP length: 47
effective length of query: 29
effective length of database: 4,178,947,911
effective search space: 121189489419
effective search space used: 121189489419
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 76 (33.7 bits)