HHsearch results for GI: 254781145 and protein with PDBid: 2jes_A
>2jes_A Portal protein; DNA translocation, molecular motor, viral portal protein, viral protein; 3.4A {Bacteriophage SPP1}
Probab=98.64 E-value=4e-06 Score=58.31 Aligned_cols=164 Identities=13% Similarity=0.071 Sum_probs=118.4
Q ss_pred CCCCCCCCEEEEEEEECCCCEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCCCCCCCCCEEE
Q ss_conf 46555685689856306873203543543102899998998848878763036622531343121-00001122574145
Q gi|254781145|r 157 NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIID-PESVLNPQFGKPIR 235 (350)
Q Consensus 157 ~~~~~~~Pf~~~~~~p~p~~~~G~g~~d~l~~lQ~~~n~~~R~~lDn~~l~~~p~~~v~~~~~~~-~~d~~~~~~g~~v~ 235 (350)
..++..+||+.|.. .-+|.|..+.+.+++++.+.++..+.+.+....+|.+.+......+ .+...+.+.++.+.
T Consensus 236 ~~~~~~vPii~~~n-----n~~g~sd~e~v~~LiDa~d~~~S~~~n~~~~~~~~ilv~~g~~~~~~~~~~~~~~~~~~~~ 310 (503)
T 2jes_A 236 AIGWGRVPIIPFKN-----NEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIK 310 (503)
T ss_dssp ---CCSCSCEEEES-----SSSCCCGGGGTHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEESCSCHHHHHHHHHHSSEEE
T ss_pred CCCCCCCCEEEEEC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 13468756699746-----8778660652299999999987078899998761464304777766065777766324413
Q ss_pred ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 04666554444445688765679999999999988752466643035443355138999999999998899999999999
Q gi|254781145|r 236 VAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQG 315 (350)
Q Consensus 236 ~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~e~~tGi~~~~~G~~~~~~~~~TAt~is~~~~~a~~r~~~~~R~~ae~ 315 (350)
+..++.++ .+............++.+...+-..+++++.+.+.. .++.++.++..+.....++.....|.|..+
T Consensus 311 ~~~~~~~~---~l~~~~~~~~~~~~~~~L~~~I~~~s~~p~~~~~~~---~gn~Sg~Aik~~~~~l~~ka~~~e~~~~~~ 384 (503)
T 2jes_A 311 VSGDGGVD---TLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETI---GGGATGPALEKLYALLDLKANMAERKIRAG 384 (503)
T ss_dssp EEEEEEEE---EECCCCCHHHHHHHHHHHHHHHHHHTTCCCCSCCSS---TTTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCE---EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 58999805---886158848999999999999999839997785334---677439999998747999999999999999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999998748
Q gi|254781145|r 316 LEILFRGLLRLIIQHQ 331 (350)
Q Consensus 316 ~k~l~~~i~~l~~~~~ 331 (350)
++.+++.+.+++....
T Consensus 385 l~~~~~li~~~l~~~~ 400 (503)
T 2jes_A 385 LRLFFWFFAEYLRNTG 400 (503)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999997416