BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781145|ref|YP_003065558.1| hypothetical protein
CLIBASIA_05245 [Candidatus Liberibacter asiaticus str. psy62]
(350 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781145|ref|YP_003065558.1| hypothetical protein CLIBASIA_05245 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040822|gb|ACT57618.1| hypothetical protein CLIBASIA_05245 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 350
Score = 292 bits (746), Expect = 6e-77, Method: Composition-based stats.
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPD 60
MALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPD
Sbjct: 1 MALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPD 60
Query: 61 SVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEM 120
SVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEM
Sbjct: 61 SVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEM 120
Query: 121 IEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGE 180
IEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGE
Sbjct: 121 IEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGE 180
Query: 181 SLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGM 240
SLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGM
Sbjct: 181 SLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGM 240
Query: 241 DIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQS 300
DIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQS
Sbjct: 241 DIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQS 300
Query: 301 GVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPRY 350
GVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPRY
Sbjct: 301 GVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPRY 350
>gi|315122535|ref|YP_004063024.1| hypothetical protein CKC_03935 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495937|gb|ADR52536.1| hypothetical protein CKC_03935 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 637
Score = 274 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 293/343 (85%), Positives = 315/343 (91%), Gaps = 1/343 (0%)
Query: 9 MLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSP 68
+LI D +VEVLEH+ R+D E +HD+RIRRKYSQGKVCVDAV PDEFLIHPD+ DIEKSP
Sbjct: 156 LLISDPEVEVLEHTQRKDREEIIHDIRIRRKYSQGKVCVDAVPPDEFLIHPDATDIEKSP 215
Query: 69 IVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYV 128
IVGRKLYLTRSDLISMGYDR+ IN L + SSQ EN+W+ K +SD ALEMIEYYELYV
Sbjct: 216 IVGRKLYLTRSDLISMGYDRKYINQLQVASSQGNENSWQLSKYHHSDTALEMIEYYELYV 275
Query: 129 TIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIE 188
T+DYD DGIAELRRV+M GGTGKDNIL NEEW+ELPFTCLRA+RAPHCF+GESLA+SIIE
Sbjct: 276 TLDYDNDGIAELRRVVMVGGTGKDNILVNEEWDELPFTCLRAIRAPHCFVGESLASSIIE 335
Query: 189 IQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGI 248
IQKIKTVLLRQTLDNLYWQNQPQTIVQEGSI+DPESVLNPQFGKPIRV +GMDIRSVLGI
Sbjct: 336 IQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIVDPESVLNPQFGKPIRVVSGMDIRSVLGI 395
Query: 249 HSVPMIEK-SFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVEL 307
HSVPMI SFSMLHYLDQELVDRTGISDISSG SPEILQNMTATATSLIEQSGVGQVEL
Sbjct: 396 HSVPMIADKSFSMLHYLDQELVDRTGISDISSGLSPEILQNMTATATSLIEQSGVGQVEL 455
Query: 308 IVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPRY 350
IVRTLAQGLE LFRGLLRLIIQHQDKVRMVRLRDQW+SFDPR+
Sbjct: 456 IVRTLAQGLERLFRGLLRLIIQHQDKVRMVRLRDQWISFDPRH 498
>gi|291334599|gb|ADD94249.1| hypothetical protein Daci_1943 [uncultured phage
MedDCM-OCT-S04-C136]
Length = 741
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 102/350 (29%), Positives = 194/350 (55%), Gaps = 12/350 (3%)
Query: 8 HMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKS 67
++K +++ ++ S + +++ +I+R G+V ++++ P+EFLI + IE +
Sbjct: 183 EEVLKQYEMQGVDISQVQVPNFNLYNCKIKRIKKTGRVKIESIPPEEFLIDRSAKTIEDA 242
Query: 68 PIVGRKLYLTRSDLISMGYDRESINNLPIIS---SQNIENTWKFPKNQY-----SDKALE 119
V K+ +TRSDL++MGY ++ ++ LP + E + Y +D + E
Sbjct: 243 DFVSHKVLMTRSDLVAMGYPQDEVDELPKSDLDIYNDEETVRLADVDDYRISSSTDTSTE 302
Query: 120 MIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIG 179
+ YE YV DYD DGIAELR+++ AG G +IL N + +PF + + PH F G
Sbjct: 303 KVLVYESYVKYDYDEDGIAELRKIVSAGADG-HHILSNMPCDSVPFVTITPIPMPHRFYG 361
Query: 180 ESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAG 239
S++ + ++Q +K+ ++RQ LDN+Y N + V +G +++ + +L + G +R
Sbjct: 362 RSISELVEDVQLMKSTVMRQLLDNMYLTNNNRVAVMDG-MVNMDDLLTTRPGGIVRTKQ- 419
Query: 240 MDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQ 299
+ + + + P+ +++F +L YLD RTG+S + G SP+ L TAT + + Q
Sbjct: 420 PPNQVMQPLQAQPISQQAFPLLSYLDSVREGRTGVSKEAQGLSPDTLNAKTATGVNALMQ 479
Query: 300 SGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+ ELI R A+ G++ LF+ + L++++QDK +++ + +Q++ P
Sbjct: 480 QTQMRSELIARVFAETGVKDLFKKIFELMVKYQDKEKIIMMSNQYIPVRP 529
>gi|227822448|ref|YP_002826420.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234]
gi|227341449|gb|ACP25667.1| hypothetical protein NGR_c19030 [Sinorhizobium fredii NGR234]
Length = 684
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 185/361 (51%), Positives = 248/361 (68%), Gaps = 16/361 (4%)
Query: 6 FIHMLIKDSDVEVLEHSHREDGGE--------KVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+ LI D +VEV+E S + E + ++IRR+ +G + AV +EFLI
Sbjct: 152 ALVQLIGDDEVEVVEQSRTTEKIETPQGMVEQPSYSVKIRRRLERGTPRLAAVPLEEFLI 211
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKN------ 111
HP+++ I SPI G + RSDLI+ GYDR+ I LP + + + +F +
Sbjct: 212 HPEAISIADSPIAGIATRMRRSDLIATGYDRDLIEGLPASTGDSGRDDEEFTRRRGVFEA 271
Query: 112 -QYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRA 170
KALE ++YYELYV +D D DGIAELRR+++AGGTG++++L NEEW+E+PF L
Sbjct: 272 KDAVPKALEEVDYYELYVKVDADDDGIAELRRLVLAGGTGEEHLLSNEEWDEVPFADLII 331
Query: 171 MRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQF 230
R PH G S+ + EIQ++KTVL+RQTLDNLYWQN Q IVQEG+I +PESVLNP+F
Sbjct: 332 ERRPHQREGGSVTDDMAEIQRVKTVLMRQTLDNLYWQNNQQPIVQEGAIANPESVLNPKF 391
Query: 231 GKPIRVAAGMDIRSVLGIHS-VPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNM 289
+PIRV+ G+D R+ LG + ++SF+ML YLDQE DRTGISD SSG +P+ L NM
Sbjct: 392 AQPIRVSQGIDARAALGYTMVPFVAKESFAMLSYLDQEATDRTGISDASSGLAPDALTNM 451
Query: 290 TATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
TA AT+LIEQ+G+GQ EL+VRT AQGL +F+GLLRL+I+HQD+ R VRLR QWV+FDPR
Sbjct: 452 TARATALIEQAGIGQTELMVRTFAQGLRRVFKGLLRLVIKHQDRPRAVRLRGQWVTFDPR 511
Query: 350 Y 350
+
Sbjct: 512 H 512
>gi|150397041|ref|YP_001327508.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419]
gi|150028556|gb|ABR60673.1| hypothetical protein Smed_1838 [Sinorhizobium medicae WSM419]
Length = 683
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 184/359 (51%), Positives = 247/359 (68%), Gaps = 15/359 (4%)
Query: 7 IHMLIKDSDVEVLEHSHRED--------GGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIH 58
+ L+ D +VEVLE S + + + ++IRR+ +G + AV +EFLIH
Sbjct: 153 LIQLVGDDEVEVLEQSQTVERMETPQGVVEQPSYSVKIRRRAERGTPRLAAVPLEEFLIH 212
Query: 59 PDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPI------ISSQNIENTWKFPKNQ 112
PD++ I SPI G + + RSDL++MG+DR+ I+ LP + F
Sbjct: 213 PDAISIADSPITGFAMRMRRSDLVAMGHDRDLIDGLPAAEAGGRDDEASTRRRDAFETKD 272
Query: 113 YSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMR 172
KALE ++YYELYV +D D DGIAELRR++ AGGT ++N+L NEEW+E+PF L R
Sbjct: 273 AVPKALEEVDYYELYVKVDADDDGIAELRRLVFAGGTSEENLLSNEEWDEVPFADLTVER 332
Query: 173 APHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGK 232
PH G S+ + EIQ++KTVL+RQTLDNLYWQN Q IVQEG+I +PE+VLNP+FG+
Sbjct: 333 RPHQREGGSVTGDMAEIQRVKTVLMRQTLDNLYWQNNQQPIVQEGAIANPEAVLNPKFGQ 392
Query: 233 PIRVAAGMDIRSVLGIHS-VPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTA 291
PIRV+ G+D R+ LG + ++SF+ML YLDQE DRTGISD SSG +P+ LQNMTA
Sbjct: 393 PIRVSQGIDARAALGYTMVPFVAKESFAMLSYLDQEATDRTGISDASSGMAPDALQNMTA 452
Query: 292 TATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPRY 350
AT+L+EQ+G+GQ EL+VRT AQGL +FRGLLRL+++HQD+ R VRLR QWV+FDPR+
Sbjct: 453 RATALVEQAGIGQTELMVRTFAQGLRRVFRGLLRLVVKHQDRPRAVRLRGQWVTFDPRH 511
>gi|294083946|ref|YP_003550703.1| putative portal protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663518|gb|ADE38619.1| putative portal protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 697
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 84/356 (23%), Positives = 162/356 (45%), Gaps = 23/356 (6%)
Query: 7 IHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEK 66
+ ML+ DV++++ S +D G I +V ++ + P+E ++ +E+
Sbjct: 180 LDMLLAQDDVDLID-SSTDDVGMV--SGTIGVTRDTSQVVIETIPPEELIVEAQCKSLEE 236
Query: 67 SPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWK---------FPKNQYSDKA 117
S + T S+L M D + ++++ +E + + S
Sbjct: 237 STFSAHRTRKTLSELREMYPDSDKLDDIGDHEDVEMETDPEILARHDGVSENRGFSSHGY 296
Query: 118 LEMI---EYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAP 174
+ + YE Y+ +D +G GIA+L +V AG +L EE PF + P
Sbjct: 297 QDQVRHILCYEAYIMLDVEGSGIAKLHKVTKAGNV----LLDIEEVKRRPFVTFCPLPIP 352
Query: 175 HCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPI 234
H F G + A + Q +TVL R LD+ N P+ +V +G + +P +++ + G +
Sbjct: 353 HAFYGSNFAEKLCATQNARTVLTRSILDHAMITNNPRYMVVKGGLSNPRELIDNRVGGLV 412
Query: 235 RVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNM-TATA 293
V+ I + + P+ F L LDQ+L D TG+S +S G + + + +A
Sbjct: 413 NVSRPDAISA---MPQAPLNPFVFQTLQQLDQDLEDNTGVSRLSQGLNKDAISKQNSAAM 469
Query: 294 TSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
+ + +++ R AQ ++ LF + RL+++++D+ ++V + +V DPR
Sbjct: 470 VEQLATMSQQRQKILARHFAQFVKSLFHEIYRLVVENEDQQKIVEISGAYVEVDPR 525
>gi|160897386|ref|YP_001562968.1| hypothetical protein Daci_1943 [Delftia acidovorans SPH-1]
gi|160362970|gb|ABX34583.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 763
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 103/332 (31%), Positives = 157/332 (47%), Gaps = 20/332 (6%)
Query: 30 KVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDR- 88
+ D+ +R G+V V+ V P+EFLI + IE + VG ++ T S+L SMGY
Sbjct: 230 MLWDVVCKRVKKGGRVRVENVPPEEFLISRKAKSIEDASFVGHRVARTISELKSMGYKNV 289
Query: 89 ESINNLPIISSQNIENTWKFPKNQ-----------YSDKALEMIEYYELYVTIDYDGDGI 137
+ I + +S N+E + + D + I E Y+ DYDGDGI
Sbjct: 290 DDITSDDQAASLNMERIERLSWDDEMAYLQMDNVQSMDTSQRQIWVTECYLRCDYDGDGI 349
Query: 138 AELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLL 197
AELR+V+ AG IL NE + PF + + PH F G S+A +E Q+I T+LL
Sbjct: 350 AELRKVVRAGN----QILENEVCDVAPFVSITPVPMPHKFFGLSVADLALEGQRINTILL 405
Query: 198 RQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKS 257
R LDN + + EG + + + +L + G +R+ + + +
Sbjct: 406 RNQLDNNNLEVNGRYFAVEGQV-NLDDLLTSRPGGVVRMKSAGMAGRLD--QGAGNSGLN 462
Query: 258 FSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLE 317
M+ Y+ D TG + + G + L N TAT + I +++LI R A G
Sbjct: 463 LQMMEYMKGFQEDSTGWTRYNQGSDGDSL-NQTATGVNQIVNRADMRLDLIARNYADGFR 521
Query: 318 ILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
LFR +L+L Q+Q MV+LR +WV PR
Sbjct: 522 ELFRLMLKLCSQYQQTEDMVKLRGKWVPVSPR 553
>gi|291334641|gb|ADD94289.1| portal protein [uncultured phage MedDCM-OCT-S04-C64]
Length = 755
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/353 (27%), Positives = 173/353 (49%), Gaps = 14/353 (3%)
Query: 10 LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVD--IEKS 67
L+ D +V+ + E ++ + G + ++ V P+EF I ++ +E +
Sbjct: 157 LLSDPNVQRELIEDSIEQTEFGLNVEFKVIEKMGSIRIEPVPPEEFGIARNARSPYVEDT 216
Query: 68 PIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIEN--------TWKFPKNQYSDKALE 119
+ + S+L++MGYD E I +LP S E + P + S++++
Sbjct: 217 NFCYHRTLKSFSELVAMGYDVELIRSLPFDESAMTEEELARRNKTDEEEPFDYVSEESMR 276
Query: 120 MIEYYELYVTIDYDGDGIAELRRVIMAGG---TGKDNILCNEEWNELPFTCLRAMRAPHC 176
E Y+ ID DGD IAEL RV +AGG +G +L EE + +PF + PH
Sbjct: 277 NYFITECYIKIDRDGDDIAELLRVTLAGGNYTSGSSRLLGIEEVDHMPFATCSPILMPHK 336
Query: 177 FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRV 236
F G S+A +++Q+IK+VL RQ LDN Y N +T V + + + + + G
Sbjct: 337 FYGLSIADITMDLQRIKSVLTRQMLDNTYLANNSRTAVNDSHVNLDDLLTSRPGGVVRYK 396
Query: 237 AAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSL 296
G + + I P+ ++++M+ YLD RTG+ D ++G L N+ +L
Sbjct: 397 GEGSASQYITPIPHNPLPNEAYTMMGYLDDVRRQRTGVGDETAGLGENSLSNVNTGVAAL 456
Query: 297 IEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+ ++ELI R L + G + +FR + +L+++HQD+ ++ + + + +P
Sbjct: 457 AFDAKRMKIELIARILGEVGFKDVFRLIHKLLMKHQDRKMLLNVAGNFQAINP 509
>gi|148257059|ref|YP_001241644.1| hypothetical protein BBta_5791 [Bradyrhizobium sp. BTAi1]
gi|146409232|gb|ABQ37738.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 557
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 18/335 (5%)
Query: 30 KVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGR-KLYLTRSDLISMGYDR 88
HD+ I + V V P+EF I + I + T + LI+ G+D
Sbjct: 18 TTHDVTIVTTRKFAQARVMGVPPEEFGIERGARSIRDCNYCFHEIVTKTEAQLIAEGFDA 77
Query: 89 ESINNLPIISSQ--------NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAEL 140
I +L + + + ++ ++ E YV +DY+G+G L
Sbjct: 78 AQIRSLGDYAGTTRVETLARDTVDEQSRASASAANSGTRLVRITEHYVRMDYEGEGRPCL 137
Query: 141 RRVIMAGGTGKDNI----LCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVL 196
++I G G+ C ++ +PF + H F G S+A ++ +Q+ KT L
Sbjct: 138 YQIITGGDQGEILRKDGQDCITPFDAIPFAATTPVPMTHRFFGRSIADLVMPLQREKTAL 197
Query: 197 LRQTLDNLYWQNQPQTIVQEGSIIDP--ESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMI 254
R LDNLY N P+ V E + + +L + G +R + + +
Sbjct: 198 KRGALDNLYLHNNPRVEVAEANAGPNTLDDLLVSRPGGVVRTKTAGGLNWQV---VPDIT 254
Query: 255 EKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ 314
+ ML Y+D EL R+G+S + G LQN +ATA + + + +++LI R +A+
Sbjct: 255 SSIYPMLQYIDAELESRSGLSKQAQGIDANALQNQSATAVAQVFSASQMRIKLIARIMAE 314
Query: 315 GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
G+ +F L I +H + + VRLR+ WV DPR
Sbjct: 315 GVRDMFGLLHATIRKHGQQRQTVRLRNAWVQVDPR 349
>gi|167600438|ref|YP_001671938.1| portal protein [Pseudomonas phage LUZ24]
gi|161168301|emb|CAP45466.1| portal protein [Pseudomonas phage LUZ24]
Length = 706
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 26/354 (7%)
Query: 10 LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPI 69
++ D D E+L S EDG + ++IR+ + ++ V + P+ FL+ + I+ +
Sbjct: 163 ILADPDTEILAQSVDEDG---TYSIKIRKDKKKREIKVTCIKPENFLVDRLATCIDDARF 219
Query: 70 VGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFP-------------KNQYSDK 116
+ + T SDL +G + ++ LP + ++ + + +
Sbjct: 220 LCHREKYTVSDLRLLGVPEDVLDELPYDEYEFSDSQPERLVRDNFDMTGQLQYNSGDDAE 279
Query: 117 ALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHC 176
A + E Y +D DGDGI+ELRR++ G I+ NE W+ PF L A R H
Sbjct: 280 ANREVWASECYTLLDVDGDGISELRRILYVGD----YIISNEPWDSRPFADLNAYRIAHK 335
Query: 177 FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRV 236
F G S+ I +IQ+I++VL+R +DN+Y NQ +++V +G + + + N G
Sbjct: 336 FHGMSVYDKIRDIQEIRSVLMRNIMDNIYRTNQGRSVVLDGQVNLEDLLTNEAAGIVRVK 395
Query: 237 AAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEIL-QNMTATATS 295
+ S++ + + + + + ML L+ + RTGI+D + G L N A + +
Sbjct: 396 ----AMNSIMPLETPQLSGEVYGMLDRLEADRGKRTGITDRTRGLDQNTLHSNQAAMSVN 451
Query: 296 LIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+ + Q++LI R A+ G++ LF+ L I++Q++ + +LR +WV+ +P
Sbjct: 452 QLMTAAEQQIDLIARMFAETGVKRLFQLLHDHAIKYQNQEEVFQLRGKWVAINP 505
>gi|27476052|ref|NP_775254.1| putative portal protein [Pseudomonas phage PaP3]
gi|27414482|gb|AAL85568.1| ORF.04 [Pseudomonas phage PaP3]
Length = 705
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 96/354 (27%), Positives = 174/354 (49%), Gaps = 26/354 (7%)
Query: 10 LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPI 69
++ D D +L S +DG + ++IR+ + ++ V V P+ FL+ + I+ +
Sbjct: 162 ILSDPDTSILAQSVDDDG---TYTIKIRKDKKKREIKVLCVKPENFLVDRLATCIDDARF 218
Query: 70 VGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFP-------------KNQYSDK 116
+ + T SDL +G + I LP + ++ + + +
Sbjct: 219 LCHREKYTVSDLRLLGVPEDVIEELPYDEYEFSDSQPERLVRDNFDMTGQLQYNSGDDAE 278
Query: 117 ALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHC 176
A + E Y +D DGDGI+ELRR++ G I+ NE W+ PF L A R H
Sbjct: 279 ANREVWASECYTLLDVDGDGISELRRILYVGD----YIISNEPWDCRPFADLNAYRIAHK 334
Query: 177 FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRV 236
F G S+ I +IQ+I++VL+R +DN+Y NQ +++V +G + + + N G +RV
Sbjct: 335 FHGMSVYDKIRDIQEIRSVLMRNIMDNIYRTNQGRSVVLDGQVNLEDLLTNEAAG-IVRV 393
Query: 237 AAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEIL-QNMTATATS 295
+ I + + + + + ML L+ + RTGI+D + G L N A + +
Sbjct: 394 KSMNSIT---PLETPQLSGEVYGMLDRLEADRGKRTGITDRTRGLDQNTLHSNQAAMSVN 450
Query: 296 LIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+ + Q++LI R A+ G++ LF+ L I++Q++ + +LR +WV+ +P
Sbjct: 451 QLMTAAEQQIDLIARMFAETGVKRLFQLLHDHAIKYQNQEEVFQLRGKWVAVNP 504
>gi|221199509|ref|ZP_03572553.1| putative portal protein [Burkholderia multivorans CGD2M]
gi|221205589|ref|ZP_03578604.1| putative portal protein [Burkholderia multivorans CGD2]
gi|221174427|gb|EEE06859.1| putative portal protein [Burkholderia multivorans CGD2]
gi|221180794|gb|EEE13197.1| putative portal protein [Burkholderia multivorans CGD2M]
Length = 807
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 24/339 (7%)
Query: 26 DGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMG 85
+ ++H++ + R G V ++AV P++FL+ S I ++ T SDL + G
Sbjct: 268 EQLPRLHNVVLTRSKKAGHVAIEAVMPEDFLVSARSRRIRD-GFCAHRVRKTLSDLKAEG 326
Query: 86 YDR-ESINNLPIISSQNIEN------------TWKFPKNQYSDKALEMIEYYELYVTIDY 132
Y+ E I++ P + ++ + + D++ +E YE Y+ ID
Sbjct: 327 YENVELIDSEPNAVAADLSELALARQNEQNRVVTNALDDGFGDESQREVELYECYLPIDV 386
Query: 133 DGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKI 192
DGDGI+E R++ AG IL NE + PF + + P IG S+A + IQ+I
Sbjct: 387 DGDGISEWRKITKAGN----AILDNEVVDGPPFALVSPISIPGLLIGRSIADLAMPIQRI 442
Query: 193 KTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVP 252
KT LR DN+ Q + + +G + + ++ + G +R+ + I + +P
Sbjct: 443 KTKFLRGLDDNMQIQINGRVGLVDGKVNVND-WMDNRPGGGVRIKSADAIVPIK--QGLP 499
Query: 253 MIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTL 312
I + +L Y+D +RTGI+ S G + L N TA I +V++I R
Sbjct: 500 DIAGAMQLLQYVDAMSQERTGITKYSQGLDADTL-NHTADGIKRITARADLRVKMIARKF 558
Query: 313 AQ-GLEILFRGLLRLIIQHQDKVRMVRL-RDQWVSFDPR 349
A+ G+ LFR + +L++QHQDK + L + +WV DPR
Sbjct: 559 AETGVTDLFRLIQKLLMQHQDKPMSIALSKGKWVDIDPR 597
>gi|288817860|ref|YP_003432207.1| putative portal protein [Hydrogenobacter thermophilus TK-6]
gi|288787259|dbj|BAI69006.1| putative portal protein [Hydrogenobacter thermophilus TK-6]
Length = 618
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 29/364 (7%)
Query: 8 HMLIKDSDVEVLEHSHR------EDGGEKVHDL--RIRRKYSQGKVCVDAVSPDEFLIHP 59
+++ ++++ +H +D G ++ + +I R S+ + C++ V EF+ HP
Sbjct: 149 EIVLGWDELQLAQHDPTAVVESAQDLGNGIYRVALKISRL-SKNQPCLENVPATEFIFHP 207
Query: 60 DSVDIEKSPIVGRKLYLTRSDLI---SMGYDR--ESINNLPIISSQNIENTWKF------ 108
++ ++ SP V + +T L G + + + +
Sbjct: 208 STLSVKDSPFVAHRKVVTVDYLKRKEKEGIYKNVDKVIESASSDDLRYTQMADYYLKPYK 267
Query: 109 ---PKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPF 165
D A + YE Y D + DG+ L VI+ G + + PF
Sbjct: 268 KYAVSESDQDLARRKVLLYECYTKYDINNDGL--LEDVIITVGNNTILRIQENIYGRPPF 325
Query: 166 TCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESV 225
L + P+ G+S A + +IQ +KT L+ Q + N+ N + + + + + V
Sbjct: 326 FVLAPILEPYQLWGKSFADVLKDIQDLKTALVNQIIVNVGMNNDYKIAINDTLVNVQDIV 385
Query: 226 LNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEI 285
+ + A ++++ + + P+ SF+ L Y++ +RTGI+ + G
Sbjct: 386 NDKPVIRM--KAGADIRQAIMPLPTQPLAPWSFNFLEYIEGTKENRTGITRYNQGLDGRS 443
Query: 286 LQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWV 344
L N TA+ S+I Q+ ++ELI R A+ G++ LF L+ L Q D+ ++RL ++ +
Sbjct: 444 L-NKTASGISMIMQAANQRLELIARIFAETGIKDLFSFLVYLNQQFIDQKTVIRLTNKSL 502
Query: 345 SFDP 348
P
Sbjct: 503 PIAP 506
>gi|308751459|gb|ADO44942.1| hypothetical protein Hydth_0542 [Hydrogenobacter thermophilus TK-6]
Length = 618
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 29/364 (7%)
Query: 8 HMLIKDSDVEVLEHSHR------EDGGEKVHDL--RIRRKYSQGKVCVDAVSPDEFLIHP 59
+++ ++++ +H +D G ++ + +I R S+ + C++ V EF+ HP
Sbjct: 149 EIVLGWDELQLAQHDPTAVVESAQDLGNGIYRVALKISRL-SKNQPCLENVPATEFIFHP 207
Query: 60 DSVDIEKSPIVGRKLYLTRSDLI---SMGYDR--ESINNLPIISSQNIENTWKF------ 108
++ ++ SP V + +T L G + + + +
Sbjct: 208 STLSVKDSPFVAHRKVVTVDYLKRKEKEGIYKNVDKVIESASSDDLRYTQMADYYLKPYK 267
Query: 109 ---PKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPF 165
D A + YE Y D + DG+ L VI+ G + + PF
Sbjct: 268 KYAVSESDQDLARRKVLLYECYTKYDINNDGL--LEDVIITVGNNTILRIQENIYGRPPF 325
Query: 166 TCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESV 225
L + P+ G+S A + +IQ +KT L+ Q + N+ N + + + + + V
Sbjct: 326 FVLAPILEPYQLWGKSFADVLKDIQDLKTALVNQIIVNVGMNNDYKIAINDTLVNVQDIV 385
Query: 226 LNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEI 285
+ + A ++++ + + P+ SF+ L Y++ +RTGI+ + G
Sbjct: 386 NDKPVIRM--KAGADIRQAIMPLPTQPLAPWSFNFLEYIEGTKENRTGITRYNQGLDGRS 443
Query: 286 LQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQWV 344
L N TA+ S+I Q+ ++ELI R A+ G++ LF L+ L Q D+ ++RL ++ +
Sbjct: 444 L-NKTASGISMIMQAANQRLELIARIFAETGIKDLFSFLVYLNQQFIDQKTVIRLTNKSL 502
Query: 345 SFDP 348
P
Sbjct: 503 PIAP 506
>gi|167583563|ref|YP_001671753.1| portal protein [Enterobacteria phage phiEco32]
gi|164375401|gb|ABY52809.1| portal protein [Enterobacteria phage phiEco32]
Length = 747
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 67/366 (18%), Positives = 149/366 (40%), Gaps = 30/366 (8%)
Query: 2 ALNYFIHMLIKD--SDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHP 59
AL ++ L ++E+ + + D+++ + + +V V+ V ++ +
Sbjct: 157 ALAAYVQGLEAGGLKNLEIFTEENEDGTV----DVKVTYEQTVKRVKVEYVPSEQIFVDE 212
Query: 60 DSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISS-------------QNIENTW 106
+ + ++ ++ DL++MG+ ++ I + +
Sbjct: 213 HATSFADAQYFCHRVRRSKEDLVAMGFPKDEIEAFNDWTDTMDTTQSTVAWSRTDWRQDI 272
Query: 107 KFPKNQYSDKALEMIEYYELYVTI-DYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPF 165
++ M+ YE Y+ D + ++L +VI AG +IL EE +PF
Sbjct: 273 DADIGTDTEDIASMVWVYEHYIRTGVLDKNKESKLYQVIQAGE----HILHTEEVTHIPF 328
Query: 166 TCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESV 225
P F G+S+ +IQ ++T L+R +DN+ N + G+ D S+
Sbjct: 329 VTFCPYPIPGSFYGQSVYDITKDIQDLRTALVRGYIDNVNNANYGRYKALVGA-YDRRSL 387
Query: 226 LNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEI 285
L+ + G + + I + + +L ++ RTG++ + G +P++
Sbjct: 388 LDNRPGGVVEMERQDAID---LFPYHNLPQGIDGLLGMSEELKETRTGVTKLGMGINPDV 444
Query: 286 LQNMTA-TATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQW 343
+N A L+ + ++ ++ R +A G+ L RG+ LI ++ + V+
Sbjct: 445 FKNDNAYATVGLMMNAAQNRLRMVCRNIAHNGMVELMRGIYSLIRENGEVPIEVQTPRGM 504
Query: 344 VSFDPR 349
V +P+
Sbjct: 505 VQVNPK 510
>gi|260753098|ref|YP_003225991.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552461|gb|ACV75407.1| hypothetical protein Za10_0861 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 729
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 21/356 (5%)
Query: 2 ALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDS 61
AL + + D+++ + D G +++ + R Q + + +E+ + +
Sbjct: 167 ALAALLMEAEDNPDIQI---TLNNDDGSGQYEVTVTRYQLQKRYVDMPIPSEEYRVSART 223
Query: 62 VDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPII-----SSQNIENTWKFPK--NQYS 114
+ + Y T SDLISMG+DR+ + +LP S + W+ + S
Sbjct: 224 RHEDDADYQAHVSYKTLSDLISMGFDRDIVESLPSDKSFPNSDGRSDARWRDESFLSGSS 283
Query: 115 DKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAP 174
D+A + YE YV ID DGDGIAEL ++ +L EE +E PF
Sbjct: 284 DQANREVLLYEEYVRIDRDGDGIAELLQIFRVKDV----LLSIEEVDEAPFVVWTPFPRA 339
Query: 175 HCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSI--IDPESVLNPQFGK 232
H IG SLA +++IQ++K+VL+RQ LD +Y N P+ V + + +L + G
Sbjct: 340 HRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPRMAVNVDGLTEDTFDDLLTIRPGA 399
Query: 233 PIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTAT 292
+R +++ I+KS M+ Y+ RTGI+ ++ G + L N TAT
Sbjct: 400 IVRYRG---GIPPTPLNAGFDIQKSLGMIEYMQSAQESRTGITRLNQGLDADSL-NKTAT 455
Query: 293 ATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+L++ G E + R AQ L LF+ L L+I D +++ + + DP
Sbjct: 456 GQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGD-PMAIKVEGLYKTVDP 510
>gi|56551276|ref|YP_162115.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542850|gb|AAV89004.1| hypothetical protein ZMO0380 [Zymomonas mobilis subsp. mobilis ZM4]
Length = 729
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 21/356 (5%)
Query: 2 ALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDS 61
AL + + D+++ + D G +++ + R Q + + +E+ + +
Sbjct: 167 ALAALLMEAEDNPDIQI---TLNNDDGSGQYEVTVTRYQLQKRYVDMPIPSEEYRVSART 223
Query: 62 VDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPII-----SSQNIENTWKFPK--NQYS 114
+ + Y T SDLISMG+DR+ + +LP S + W+ + S
Sbjct: 224 RHEDDADYQAHVSYKTLSDLISMGFDRDIVESLPSDKSFPNSDGRSDARWRDESFLSGSS 283
Query: 115 DKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAP 174
D+A + YE YV ID DGDGIAEL ++ +L EE +E PF
Sbjct: 284 DQANREVLLYEEYVRIDRDGDGIAELLQIFRVKDV----LLSIEEVDEAPFVVWTPFPRA 339
Query: 175 HCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSI--IDPESVLNPQFGK 232
H IG SLA +++IQ++K+VL+RQ LD +Y N P+ V + + +L + G
Sbjct: 340 HRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPRMAVNVDGLTEDTFDDLLTIRPGA 399
Query: 233 PIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTAT 292
+R +++ I+KS M+ Y+ RTGI+ ++ G + L N TAT
Sbjct: 400 IVRYRG---GIPPTPLNAGFDIQKSLGMIEYMQSAQESRTGITRLNQGLDADSL-NKTAT 455
Query: 293 ATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+L++ G E + R AQ L LF+ L L+I D +++ + + DP
Sbjct: 456 GQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGD-PMAIKVEGLYKTVDP 510
>gi|241760934|ref|ZP_04759023.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374553|gb|EER64014.1| hypothetical protein ZmobDRAFT_0099 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 729
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 21/356 (5%)
Query: 2 ALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDS 61
AL + + D+++ + D G +++ + R Q + + +E+ + +
Sbjct: 167 ALAALLMEAEDNPDIQI---TLNSDNGSGQYEVTVTRYQLQKRYVDMPIPSEEYRVSART 223
Query: 62 VDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPII-----SSQNIENTWKFPK--NQYS 114
+ + Y T SDLISMG+DR+ + +LP S + W+ + S
Sbjct: 224 RHEDDADYQAHVSYKTLSDLISMGFDRDIVESLPSDKSFPNSDGRSDARWRDESFLSGSS 283
Query: 115 DKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAP 174
D+A + YE YV ID DGDGIAEL ++ +L EE +E PF
Sbjct: 284 DQANREVLLYEEYVRIDRDGDGIAELLQIFRVKDV----LLSIEEVDEAPFVVWTPFPRA 339
Query: 175 HCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSI--IDPESVLNPQFGK 232
H IG SLA +++IQ++K+VL+RQ LD +Y N P+ V + + +L + G
Sbjct: 340 HRMIGNSLAEKVMDIQRVKSVLMRQALDGVYQTNAPRMAVNVDGLTEDTFDDLLTIRPGA 399
Query: 233 PIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTAT 292
+R +++ I+KS M+ Y+ RTGI+ ++ G + L N TAT
Sbjct: 400 IVRYRG---GIPPTPLNAGFDIQKSLGMIEYMQSAQESRTGITRLNQGLDADSL-NKTAT 455
Query: 293 ATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+L++ G E + R AQ L LF+ L L+I D +++ + + DP
Sbjct: 456 GQALLQAQGQQMEEYVARNFAQSLGRLFQKKLWLMIASGD-PMAIKVEGLYKTVDP 510
>gi|316934283|ref|YP_004109265.1| putative portal protein [Rhodopseudomonas palustris DX-1]
gi|315601997|gb|ADU44532.1| putative portal protein [Rhodopseudomonas palustris DX-1]
Length = 673
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/352 (21%), Positives = 144/352 (40%), Gaps = 20/352 (5%)
Query: 7 IHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEK 66
+ DVEV + E G + R + V+ V P+EF +
Sbjct: 160 AQAITSQEDVEV-DLELDEATG--TYSGSWTRVTDTSGLRVEVVPPEEFYSDASKKRRQD 216
Query: 67 SPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKN--------QYSDKAL 118
GRK TR++LIS GY R+ ++ + + S ++ + L
Sbjct: 217 GTR-GRKTLKTRAELISEGYPRDKVSKVRVSSEIEFDSERQERDRETNDGIGSDAPQSEL 275
Query: 119 EMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFI 178
+ I +E ++ + GDG A L R++ A G ++ E + F +R PH
Sbjct: 276 DQILVHETFIQLSLKGDGKASLYRIVHADG----HLFEMGEVADDNFLDFVPLRRPHSQF 331
Query: 179 GESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAA 238
G + + I+ Q +TV+ R LD+ N P+ V S+ +P+ +L+ + + V
Sbjct: 332 GNNFSKRIVPTQNARTVITRSILDHAATVNNPRWTVLNNSLSNPKELLDARLRGVVNVKN 391
Query: 239 GMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT-SLI 297
I + + F +L L + TGIS +S G + + + + + + +
Sbjct: 392 RDAIGI---LPYPQLNNAVFPLLEMLKTNKEETTGISSLSQGLNKDAISSQNSQGMVNDL 448
Query: 298 EQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
+ ++I R A L LF +++I++Q + ++ + + + DPR
Sbjct: 449 ITVSQTRQKIIARNFAMFLHDLFLAARKVVIENQTRKKVWEFDNNFQNIDPR 500
>gi|307308935|ref|ZP_07588618.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti
BL225C]
gi|306900569|gb|EFN31182.1| hypothetical protein SinmeBDRAFT_4502 [Sinorhizobium meliloti
BL225C]
Length = 677
Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 12/341 (3%)
Query: 16 VEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSV-DIEK----SPIV 70
+E + GG +V D++IR + + V V P++ ++ D+ D E + +
Sbjct: 173 IEESGEPYTIPGGVQVRDVKIRTVTRRSCINVFPVDPEDAVLSTDAQFDPETGGIRAKLQ 232
Query: 71 GRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTI 130
G + ++RS LI +G+D+ +++ +P ++ + + K+ ++A + V
Sbjct: 233 GHRKIMSRSVLIDLGFDKATVDRIPGVNEKTDGIALERLKDVSGERAFDKDMVEVYTVYT 292
Query: 131 DYDGDGIAELRRVIMAGGTGKDNILCNEEWNEL-PFTCLRAMRAPHCFIGESLAASIIEI 189
D + R+ G + +L EE P+ G+ +A I E
Sbjct: 293 RLKLDTTSRHYRITFGGDSANPILLDYEETTRFYPYAAFVPYPLAGTLFGQGIADRIGED 352
Query: 190 QKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIH 249
+ + + R D+L P T+V + + + + N GK IR ++ + +
Sbjct: 353 HEKISKMERAVQDSLNMSVFPITVVDD-DVSSIDDLTNLHPGKVIRSSSPNGG--INFVQ 409
Query: 250 SVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIV 309
++ ++ L+Q+L TG+ LQ TATA + +E +
Sbjct: 410 HPFTGAQATGIIERLEQKLDFSTGVGPQMMTLDASDLQRTTATAINQRSNQQQTLIETVS 469
Query: 310 RTLAQ-GLEILFRGLLRLIIQHQDKVRMV--RLRDQWVSFD 347
R A+ G L + ++ L++Q D+ + + RL ++ D
Sbjct: 470 RFFAETGYRYLTKVIVDLLVQKPDESQELIGRLTGNFIPVD 510
>gi|291334834|gb|ADD94474.1| hypothetical protein CLIBASIA_05245 [uncultured phage
MedDCM-OCT-S06-C1041]
Length = 265
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 84 MGYDRESINNLPIISSQNIEN--------TWKFPKNQYSDKALEMIEYYELYVTIDYDGD 135
MGYD E I +LP S E + P + S++++ E Y+ ID DGD
Sbjct: 1 MGYDVELIRSLPFDESAMTEEELARRNKTDEEEPFDYVSEESMRNYFITECYIKIDRDGD 60
Query: 136 GIAELRRVIMAGG---TGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKI 192
IAEL RV +AGG +G +L EE + +PF + PH F G S+A +++Q+I
Sbjct: 61 DIAELLRVTLAGGNYTSGSSRLLGIEEVDHMPFATCSPILMPHKFYGLSIADITMDLQRI 120
Query: 193 KTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVP 252
K+VL RQ LDN Y N +T V + + + + + G G + + I P
Sbjct: 121 KSVLTRQMLDNTYLANNSRTAVNDSHVNLDDLLTSRPGGVVRYKGEGSASQYITPIPHNP 180
Query: 253 MIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTL 312
+ ++++M+ YLD RTG+ D ++G L N+ +L + ++ELI R L
Sbjct: 181 LPNEAYTMMGYLDDVRRQRTGVGDETAGLGENSLSNVNTGVAALAFDAKRMKIELIARIL 240
Query: 313 AQ-GLEILFRGLLRLIIQHQDKV 334
+ G + +FR + +L+++HQD+
Sbjct: 241 GEVGFKDVFRLIHKLLMKHQDRK 263
>gi|316995429|gb|ADU79210.1| hypothetical protein EcP1_gp59 [Enterobacter phage EcP1]
Length = 719
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 108/348 (31%), Gaps = 19/348 (5%)
Query: 10 LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSP 68
L + V +E E E K Q + V+ ++ + I P D++K+
Sbjct: 206 LEQGFAVRAVETGEMEKVTE--------TKVLQNQPYVEVLNIENVYIDPSCQGDMDKAT 257
Query: 69 IVGRKLYLTRSDLISMGYDRESI-------NNLPIISSQNIENTWKFPKNQYSDKALEMI 121
V + + ++L G + + L S + T S K+ +
Sbjct: 258 FVIHRFETSIAELKKSGNYKNLDKLTVKDSDELIPSISDDEIKTSTPTDYNISGKSRKRF 317
Query: 122 EYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGES 181
E + D D G+ V G + PF + + GE
Sbjct: 318 NVTEYWGYYDIDDSGVLTPIVVAYVGDVKIRCSENPYPHGKPPFVVIPYLPMDSSVYGEP 377
Query: 182 LAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPE-SVLNPQFGKPIRVAAGM 240
A I + Q I R +D + Q I+++
Sbjct: 378 DAELIYDNQAIIGASTRAMIDLVARSANGQNIIRKDVFDPVNYRKFMAGEDAQSNPLNVP 437
Query: 241 DIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQS 300
++ + + + ++ + E +G+ S G S L A + +
Sbjct: 438 LAEAIRTVTTPEVPSIIPGLIQQQNNEAESLSGVKAFSEGISSGSL-GDVAAGIRGVLDA 496
Query: 301 GVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQ-WVSFD 347
+ I+R L +G+ L R ++ + + ++R+ + +V
Sbjct: 497 SSKREMSILRRLKKGMVDLGRMIIAMNQEFLTDEEIIRITNDAFVHVK 544
>gi|119952228|ref|YP_950537.1| 94 kDa protein [Enterobacteria phage N4]
gi|117650947|gb|ABK54420.1| 94 kDa protein [Enterobacteria phage N4]
Length = 763
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 57/345 (16%), Positives = 125/345 (36%), Gaps = 15/345 (4%)
Query: 17 EVLEHSHR--EDGGEKVHDLRIRRKYSQGKVCVDAVS------PDEFLIHPDSV-DIEKS 67
E ++ S R ++ G+ + ++ ++ +V + P+ +I P DI K+
Sbjct: 202 EAIKESVRFFDETGQATYAVQTGTTTTEVEVPLANHPTVEMLNPENIIIDPSCQGDINKA 261
Query: 68 PIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKN----QYSDKALEMIEY 123
++DL+ ++N + SS + Q SD + +
Sbjct: 262 MFAIVSFETCKADLLKEKDRYHNLNKIDWQSSAPVNEPDHATTTPQEFQISDPMRKRVVA 321
Query: 124 YELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLA 183
YE + D +G+G+ E G T +LPF + M GE A
Sbjct: 322 YEYWGFWDIEGNGVLEPIVATWIGSTLIRLEKNPYPDGKLPFVLIPYMPVKRDMYGEPDA 381
Query: 184 ASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIR 243
+ + Q + ++R +D L Q + +G + S + +
Sbjct: 382 ELLGDNQAVLGAVMRGMIDLLGRSANGQRGMPKGMLDALNSRRYREGEDYEYNPTQNPAQ 441
Query: 244 SVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVG 303
++ + + + +M +QE TG+ + G + E A + +
Sbjct: 442 MIIEHKFPELPQSALTMATLQNQEAESLTGVKAFAGGVTGESY-GDVAAGIRGVLDAASK 500
Query: 304 QVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-QWVSFD 347
+ I+R LA+G+ + ++ + + +VR+ + ++V+
Sbjct: 501 REMAILRRLAKGMSEIGNKIIAMNAVFLAEHEVVRITNEEFVTIK 545
>gi|227822445|ref|YP_002826417.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234]
gi|227341446|gb|ACP25664.1| hypothetical protein NGR_c19000 [Sinorhizobium fredii NGR234]
Length = 361
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 116/189 (61%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Query: 163 LPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDP 222
+PF L R PH G S+ + EIQ++KTVL+RQTLDNLYWQN Q IVQEG+I +P
Sbjct: 1 MPFADLIIERRPHQREGGSVTDDMAEIQRVKTVLMRQTLDNLYWQNNQQPIVQEGAIANP 60
Query: 223 ESVLNPQFGKPIRVAAGMDIRSVLGIHS-VPMIEKSFSMLHYLDQELVDRTGISDISSGF 281
ESVLNP+FG+PIRV+ G+D R+ LG + ++SF+ML YLDQE DRTGISD SSG
Sbjct: 61 ESVLNPKFGQPIRVSQGIDARAALGYTMVPFVAKESFAMLSYLDQEATDRTGISDASSGL 120
Query: 282 SPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD 341
+P+ L NMTA AT+LIEQ+G+GQ EL+VRT AQGL +F+GLLRL+I+HQD+ R VRLR
Sbjct: 121 APDALTNMTARATALIEQAGIGQTELMVRTFAQGLRRVFKGLLRLVIKHQDRPRAVRLRG 180
Query: 342 QWVSFDPRY 350
QWV+FDPR+
Sbjct: 181 QWVTFDPRH 189
>gi|237651609|ref|YP_002899079.1| putative portal protein [Roseophage DSS3P2]
gi|220898079|gb|ACL81337.1| N4 94kDa-like protein [Silicibacter phage DSS3phi2]
Length = 800
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 48/341 (14%), Positives = 113/341 (33%), Gaps = 16/341 (4%)
Query: 19 LEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVD-IEKSPIVGRKLYLT 77
++ + + + + R + V + V+ + P EK+ + T
Sbjct: 239 MQQLVKAEPDGIIETIEERMVKNCPSVRIINVA--NLFVDPSCEGEWEKAQYMIYTYEAT 296
Query: 78 RSDLISMGYDRESIN-----------NLPIISSQNIENTWKFPKNQYSDKALEMIEYYEL 126
S+L + ++++ N ++ + + + YE
Sbjct: 297 PSELKAKKNYYQNLDKVNWESAKIQSNHGNPDHESNTPNNDMRTSGTGSADKQKVLVYEY 356
Query: 127 YVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASI 186
+ D +G+ V G T + PF + M GE+ A+ +
Sbjct: 357 WGLYDIYANGVMVPIVVTWVGETIIEMRENPFPDKRPPFVIVPYMPILKSVFGEADASLL 416
Query: 187 IEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVL 246
+ Q+I + R +D + QT +G + Q G ++
Sbjct: 417 QDNQRIIGAVTRGVIDLMGRSANAQTGYAKGFLDPVNKRRFTQGEDFEFNPNGDPKANIR 476
Query: 247 GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVE 306
+ + + + + + E TG+ S G S + AT S +
Sbjct: 477 QMEYPEIPRSAHETIQWQNAEAEALTGVKSFSGGISGDAY-GRVATGIRGALDSASQREM 535
Query: 307 LIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-QWVSF 346
I+R LA+G++ + ++ + + + ++R+ + ++V
Sbjct: 536 SILRRLAKGIQDIGMKMISMNGKFLSEKEIIRVTNREFVEV 576
>gi|282599474|ref|YP_003358364.1| N4 gp59-like protein [Pseudomonas phage LUZ7]
gi|259048573|emb|CAZ66223.1| N4 gp59-like protein [Pseudomonas phage LUZ7]
Length = 720
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 112/320 (35%), Gaps = 9/320 (2%)
Query: 34 LRIRRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSPIVGRKLYLTRSDLISMGYDR--ES 90
+++++ + + +I P D+ K+ V + ++L + G E
Sbjct: 224 VKVQKTIVN-QPTLKVCDFRNIVIDPSCNGDMNKAKFVVESFESSYAELKADGRYSNLEK 282
Query: 91 INNLPII---SSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAG 147
IN + ++D++ + + +E + D GDG G
Sbjct: 283 INEQNSDILSQPDYATGSESVRNFDFADRSRKRLVVHEYWGYYDIHGDGELHSIVATWVG 342
Query: 148 GTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQ 207
L ++P+ + G+S + +I+ QKI + R +D +
Sbjct: 343 QVLIRLELNPFPDGKIPYVVAAYLPVKDSVYGDSDGSLLIDNQKIVGAISRGMIDIMAQS 402
Query: 208 NQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQE 267
Q Q+G++ + ++ + + ML+ E
Sbjct: 403 ANGQVGFQKGALDITNRRRYERGETYEFNPGNNPATAIYTHTFQEIPRSAEYMLNQQQLE 462
Query: 268 LVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLI 327
TG+ ++G S + L TAT + + I+R L+ L + R ++ +
Sbjct: 463 AESMTGVKAFNTGISGQAL-GDTATGIRGALDAASKRELGILRRLSDCLIEVGRRVIAMN 521
Query: 328 IQHQDKVRMVRLRDQ-WVSF 346
+ D ++R+ ++ +V+
Sbjct: 522 AEFLDDEEVIRITNEGFVTV 541
>gi|308516960|emb|CBW47065.1| structural protein, N4 gp59-like [Roseovarius sp. 217 phage 1]
Length = 801
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/341 (15%), Positives = 110/341 (32%), Gaps = 16/341 (4%)
Query: 19 LEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSPIVGRKLYLT 77
+ + V + R + V + ++ + P D E+S + T
Sbjct: 239 IGQPVTAEPDGVVETVEERMVKNCPSVRIVNIA--NLFVDPSCEGDWEQSQYMVYTYEAT 296
Query: 78 RSDLI-SMGYDRESIN----------NLPIISSQNIENTWKFPKNQYSDKALEMIEYYEL 126
+S+L+ G + N N ++ + + + YE
Sbjct: 297 KSELMAKKGTYQNLENVNWESAKIQSNAGNPDHESNTPNNDMRTSGTGATDKQKVLVYEY 356
Query: 127 YVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASI 186
+ D +GI V G T + PF + M GE+ A+ +
Sbjct: 357 WGLYDIYDNGIMVPIVVTWVGETIIEMRENPFPDKRPPFVIVPYMPILKSVFGEADASLL 416
Query: 187 IEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVL 246
+ Q+I + R +D + QT +G + G ++
Sbjct: 417 QDNQRIIGAVTRGVIDLMGRSANAQTGYAKGFLDPVNKRRFVNGEDFEFNPNGDPKANIR 476
Query: 247 GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVE 306
+ + + + + E TG+ S G S + AT S +
Sbjct: 477 QMEYPEIPRSAHETIQMQNAEAEALTGVKSFSGGISGDAY-GSVATGIRGALDSAATREM 535
Query: 307 LIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-QWVSF 346
I+R LA+G++ + ++ + + + +VR+ + ++V
Sbjct: 536 SILRRLAKGMQAIGTKMIAMNAKFLSEKEIVRVTNEEFVEV 576
>gi|237651526|ref|YP_002898997.1| putative portal protein [Roseophage EE36P1]
gi|220898158|gb|ACL81415.1| N4 gp59 protein [Sulfitobacter phage EE36phi1]
Length = 800
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 47/342 (13%), Positives = 115/342 (33%), Gaps = 18/342 (5%)
Query: 19 LEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVD-IEKSPIVGRKLYLT 77
++ + + + + R + V + V+ + P EK+ + T
Sbjct: 239 MQQLVKAEPDGVIETIEERMVKNCPSVRIINVA--NLFVDPSCEGEWEKAQYMIYTYEAT 296
Query: 78 RSDLISMGYDRESIN-----------NLPIISSQNIENTWKFPKNQYSDKALEMIEYYEL 126
S+L + ++++ N ++ + + + YE
Sbjct: 297 PSELKAKKDYYQNLDQVNWESAKIQSNHGNPDHESKTPNNDMRTSGTGSADKQKVLVYEY 356
Query: 127 YVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASI 186
+ D +G+ V G T + PF + M GE+ A+ +
Sbjct: 357 WGLYDIYNNGVMVPIVVTWVGETIIEMRENPFPDKRPPFVIVPYMPILKSVFGEADASLL 416
Query: 187 IEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVL 246
+ Q+I + R +D + QT +G + G+ D ++ +
Sbjct: 417 QDNQRIIGAVTRGVIDLMGRSANAQTGYAKGFLDPVNKR-RFTNGEDFEFNPNGDPKANI 475
Query: 247 -GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQV 305
+ + + + + + E TG+ S G + + AT S +
Sbjct: 476 RQMEYPEIPRSAHETIQWQNAEAEALTGVKSFSGGITGDAY-GRVATGIRGALDSAAQRE 534
Query: 306 ELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-QWVSF 346
I+R LA+G++ + ++ + + + ++R+ + ++V
Sbjct: 535 MSILRRLAKGIQDIGMKMIAMNGKFLSEKEIIRVTNREFVEV 576
>gi|307545235|ref|YP_003897714.1| Haemophilus-specific protein, uncharacterized [Halomonas elongata
DSM 2581]
gi|307217259|emb|CBV42529.1| Haemophilus-specific protein, uncharacterized [Halomonas elongata
DSM 2581]
Length = 749
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 30/320 (9%)
Query: 44 KVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMG----YDRESINNLPIISS 99
+ + VSP + PD+ I+ + + TRS L + Y ++I +
Sbjct: 240 RPEFERVSPFDMYPSPDATSIDDGAFIIERARFTRSQLNQLIGVPSYSEDAIRQVLHQYG 299
Query: 100 QNIENTWKFPKNQYSDKALEMIEYYELYVTID-----------------YDGDGIAEL-- 140
Q W + + ++ E+ TID D I +
Sbjct: 300 QGGLRDWLWSDGERAELEGRGHEWLTPGETIDGLIYSGGAQGVTLLQWGISPDEIEDPLA 359
Query: 141 ---RRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLL 197
I+ G + + P+ P F G+ + + ++Q +
Sbjct: 360 EYEVEAILIGQHVIRVRINRDPLERRPYHKSSFQPVPGSFWGQGIPELMADVQDVCNATA 419
Query: 198 RQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAG---MDIRSVLGIHSVPMI 254
R ++NL + PQ V E + E + K R A + ++
Sbjct: 420 RGLVNNLAISSGPQVEVYEDRLQPQEDPTDIYPWKIWRTKASIETGNNPALRFFQPQSNA 479
Query: 255 EKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ 314
+ ++ + + T I G TA+ S++ +S ++ +R + +
Sbjct: 480 SELLAVYEQFEYRADESTNIPRYMYGSDEAGGAGQTASGLSMLMESANKGIKDAIRHIDR 539
Query: 315 G-LEILFRGLLRLIIQHQDK 333
G L + L +Q D
Sbjct: 540 GVLRRVIEALWLHNMQFSDD 559
>gi|282598927|ref|YP_003358477.1| N4 gp59-like protein [Pseudomonas phage LIT1]
gi|259048687|emb|CAZ66336.1| N4 gp59-like protein [Pseudomonas phage LIT1]
Length = 726
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 105/300 (35%), Gaps = 8/300 (2%)
Query: 54 EFLIHPDS-VDIEKSPIVGRKLYLTRSDLISMGYDR--ESINNLPI---ISSQNIENTWK 107
+I P D K+ + + ++L + G + + I +
Sbjct: 249 NIVIDPSCGSDFSKAKFLIETFESSYAELKADGRYQNLDKIQVEGQNLLSEPDYTGPSEG 308
Query: 108 FPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTC 167
+ DK+ + + +E + D GDG+ G +P+
Sbjct: 309 VRNFDFQDKSRKRLVVHEYWGYYDIHGDGVLHPIVATWVGAVMIRMEENPFPDKRIPYVV 368
Query: 168 LRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLN 227
+ + GES A +I+ Q+I + R +D + Q V +G++
Sbjct: 369 VNYIPRKRDLYGESDGALLIDNQRIIGAVTRGMIDTMARSANGQVGVMKGALDVTNRRRF 428
Query: 228 PQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQ 287
+ +V + + + M++ E TG+ ++G S L
Sbjct: 429 DRGENYEFNPGADPRAAVHMHTFPEIPQSAQYMINLQQAEAESMTGVKAFNAGISGAAL- 487
Query: 288 NMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQ-WVSF 346
TATA + + I+R L+ G+ + R ++ + + D V +VR+ ++ +V
Sbjct: 488 GDTATAVRGALDAASKRELGILRRLSAGIIEIGRKIIAMNAEFLDDVEVVRITNEHFVDI 547
>gi|326573143|gb|EGE23112.1| putative portal protein [Moraxella catarrhalis CO72]
Length = 806
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 5/313 (1%)
Query: 37 RRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSPIVGRKLYLTRSDLISMGYDRES-INNL 94
R ++ V + + I P + E + V + S+L G +
Sbjct: 288 RVIVNKPTVDICNLK--NVFIDPTCRGNFENAQFVVHAYESSLSELKKQGIYQNLGYLME 345
Query: 95 PIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNI 154
+ N + ++ D A + YE + D +G G T
Sbjct: 346 QQSQADNSIDKPSDDVFKFQDNARRKLTVYEYWGYWDIHDNGETTAIVCAWVGDTIIRME 405
Query: 155 LCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+LPF + G A + + Q+I + R +D L QT
Sbjct: 406 ENPFPKGKLPFVVFNYLPEEESIWGIPNAELLGDNQEILGAVTRGMIDLLGKSANSQTAF 465
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + V V + + M+H ++ E +G+
Sbjct: 466 PKNFLDSANKVKYSTGQDYEYNQGFDPRVHVHTHTFPEIPNSAMMMVHSMNNEAESLSGV 525
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
SS +ATA + + + I+R +++G + R ++ + + +
Sbjct: 526 KAFSSQGISASHLGDSATAARGVLDAVSKREMSILRRISEGFIQMGRFIMAMNSEFLSEK 585
Query: 335 RMVRLRD-QWVSF 346
+VR+ + ++V+
Sbjct: 586 EIVRITNKEFVTI 598
>gi|326567485|gb|EGE17600.1| putative portal protein [Moraxella catarrhalis BC1]
Length = 806
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 5/313 (1%)
Query: 37 RRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSPIVGRKLYLTRSDLISMGYDRES-INNL 94
R ++ V + + I P + E + V + S+L G +
Sbjct: 288 RVIVNKPTVDICNLK--NVFIDPTCRGNFENAQFVVHAYESSLSELKKQGIYQNLGYLME 345
Query: 95 PIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNI 154
+ N + ++ D A + YE + D +G G T
Sbjct: 346 QQSQADNSIDKPSDDVFKFQDNARRKLTVYEYWGYWDIHDNGETTAIVCAWVGDTIIRME 405
Query: 155 LCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+LPF + G A + + Q+I + R +D L QT
Sbjct: 406 ENPFPKGKLPFVVFNYLPEEESIWGIPNAELLGDNQEILGAVTRGMIDLLGKSANSQTAF 465
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + V V + + M+H ++ E +G+
Sbjct: 466 PKNFLDSANKVKYSTGQDYEYNQGFDPRVHVHTHTFPEIPNSAMMMVHSMNNEAESLSGV 525
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
SS +ATA + + + I+R +++G + R ++ + + +
Sbjct: 526 KAFSSQGISASHLGDSATAARGVLDAVSKREMSILRRISEGFIQMGRFIMAMNSEFLSEK 585
Query: 335 RMVRLRD-QWVSF 346
+VR+ + ++V+
Sbjct: 586 EIVRITNKEFVTI 598
>gi|326562389|gb|EGE12709.1| putative portal protein [Moraxella catarrhalis 103P14B1]
Length = 806
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 5/313 (1%)
Query: 37 RRKYSQGKVCVDAVSPDEFLIHPDSV-DIEKSPIVGRKLYLTRSDLISMGYDRES-INNL 94
R ++ V + + I P + E + V + S+L G +
Sbjct: 288 RVIVNKPTVDICNLK--NVFIDPTCKGNFENAQFVVHAYESSLSELKKQGIYQNLGYLME 345
Query: 95 PIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNI 154
+ N + ++ D A + YE + D +G G T
Sbjct: 346 QHAQADNSIDKPSDDVFKFQDNARRKLTVYEYWGYWDIHDNGETTAIVCAWVGDTIIRME 405
Query: 155 LCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+LPF + G A + + Q+I + R +D L QT
Sbjct: 406 ENPFPKGKLPFVVFNYLPEEESIWGIPNAELLGDNQEILGAVTRGMIDLLGKSANSQTAF 465
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + V V + + M+H ++ E +G+
Sbjct: 466 PKNFLDSANKVKYSTGQDYEYNQGFDPRVHVHTHTFPEIPNSAMMMVHSMNNEAESLSGV 525
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
SS +ATA + + + I+R +++G + R ++ + + +
Sbjct: 526 KAFSSQGISASHLGDSATAARGVLDAVSKREMSILRRISEGFIQMGRFIMAMNSEFLSEK 585
Query: 335 RMVRLRD-QWVSF 346
+VR+ + ++V+
Sbjct: 586 EIVRITNKEFVTI 598
>gi|113461527|ref|YP_719596.1| hypothetical protein HS_1384 [Haemophilus somnus 129PT]
gi|112823570|gb|ABI25659.1| hemophilus-specific protein, uncharacterized [Haemophilus somnus
129PT]
Length = 688
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/384 (13%), Positives = 114/384 (29%), Gaps = 53/384 (13%)
Query: 1 MALNYFIHM---LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+AL+Y + +++ V+ ++ D G + S+ V V P +F+
Sbjct: 111 LALHYAAVLGTGILRGPVVDTIDERIWSDDGMGNWSAQ---TKSKIVPKVRLVLPWDFVP 167
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISM----GYDRESINNL----------PIISSQNIE 103
+ ++ V + YLT+ L ++ Y +++ L
Sbjct: 168 DMTAPTLKDCQFVFERSYLTKKQLQNLLNNPYYLADTVQALIESEASETHTSSSDMDGYL 227
Query: 104 NTWKFPKNQYSDKALEMIEYYELYVTIDY---------------------DGDGIAELRR 142
+T + + E + + I AE+
Sbjct: 228 DTLRTLSGLEKASNDKRYEVWTYHGGIPVSVLEQANQSLEEGYALELTEEQKSEKAEIDG 287
Query: 143 VIMAGGTGKDNILCNEEWN--ELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQT 200
VI+ G GK + + E P++ C G + + Q+I R
Sbjct: 288 VIVMTGNGKILSVNLNPLDTAEFPYSVYTCEPDVACVFGFGIPYLCRDAQEILNTAWRGM 347
Query: 201 LDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLG-------IHSVPM 253
+DN Q +V + + + K R + +
Sbjct: 348 IDNGVLTIGSQIVVNSSVLSPVDKSWEIKPNKLWRTNDRASANASFEAQRAFGVFNFESR 407
Query: 254 IEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLA 313
++ +++ + + +G+ I+ G ++ T S++ + V+
Sbjct: 408 QQELANIIQLAKSFMDEESGLPMIAQGEQGQV--TPTLGGMSMLMNAANAVRRRQVKEWD 465
Query: 314 QGL-EILFRGLLRLIIQHQDKVRM 336
+ + L R + D +
Sbjct: 466 DQVTKPLIRRFYEYNMAMNDDPNI 489
>gi|170719076|ref|YP_001784230.1| hypothetical protein HSM_0898 [Haemophilus somnus 2336]
gi|168827205|gb|ACA32576.1| Haemophilus-specific protein, uncharacterized [Haemophilus somnus
2336]
Length = 725
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/384 (13%), Positives = 114/384 (29%), Gaps = 53/384 (13%)
Query: 1 MALNYFIHM---LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+AL+Y + +++ V+ ++ D G + S+ V V P +F+
Sbjct: 148 LALHYAAVLGTGILRGPVVDTIDERIWSDDGMGNWSAQ---TKSKIVPKVRLVLPWDFVP 204
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISM----GYDRESINNL----------PIISSQNIE 103
+ ++ V + YLT+ L ++ Y +++ L
Sbjct: 205 DMTAPTLKDCQFVFERSYLTKKQLQNLLNNPYYLADTVQALIESEASETHTSSSDMDGYL 264
Query: 104 NTWKFPKNQYSDKALEMIEYYELYVTIDY---------------------DGDGIAELRR 142
+T + + E + + I AE+
Sbjct: 265 DTLRTLSGLEKASNDKRYEVWTYHGGIPVSVLEQANQSLEEGYALELTEEQKSEKAEIDG 324
Query: 143 VIMAGGTGKDNILCNEEWN--ELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQT 200
VI+ G GK + + E P++ C G + + Q+I R
Sbjct: 325 VIVMTGNGKILSVNLNPLDTAEFPYSVYTCEPDVACVFGFGIPYLCRDAQEILNTAWRGM 384
Query: 201 LDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLG-------IHSVPM 253
+DN Q +V + + + K R + +
Sbjct: 385 IDNGVLTIGSQIVVNSSVLSPVDKSWEIKPNKLWRTNDRASANASFEAQRAFGVFNFESR 444
Query: 254 IEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLA 313
++ +++ + + +G+ I+ G ++ T S++ + V+
Sbjct: 445 QQELANIIQLAKSFMDEESGLPMIAQGEQGQV--TPTLGGMSMLMNAANAVRRRQVKEWD 502
Query: 314 QGL-EILFRGLLRLIIQHQDKVRM 336
+ + L R + D +
Sbjct: 503 DQVTKPLIRRFYEYNMAMDDDPNI 526
>gi|319776214|ref|YP_004138702.1| hypothetical protein HICON_18250 [Haemophilus influenzae F3047]
gi|317450805|emb|CBY87027.1| Putative uncharacterized protein [Haemophilus influenzae F3047]
Length = 731
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/386 (12%), Positives = 117/386 (30%), Gaps = 55/386 (14%)
Query: 1 MALNYFIHM---LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+ L+Y + +++ V+V+E + I ++ V V P +F+
Sbjct: 151 LCLHYAAALGTGILRAPVVDVVESKAWKQDSLGNWVGEI---VNKTIPAVRLVLPWDFVP 207
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISM----GYDRESINNL----------PIISSQNIE 103
+ ++ V + ++T+ L ++ Y +ES+ L
Sbjct: 208 DMTAPTLKDCQFVFERSHVTKKQLQALAKNPYYLKESVLELCELDGGDTRTASNDMDGYV 267
Query: 104 NTWKFPKNQYSDKALEMIEYYELYV------------------TIDYDGDGIA-----EL 140
+T + + E + + ++ D + E+
Sbjct: 268 DTLRTLSGLETQSKDNRYELWTYHGGIPLNVLSGANELLGEDNKLNIPDDEESRAANLEI 327
Query: 141 RRVIMAGGTGKDNILCNEEWN--ELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLR 198
VI+ G GK + + E P++ C G + + Q+I R
Sbjct: 328 EGVIVMAGNGKILSVNLNPLDTAEFPYSVYTCEPDVCCLFGFGIPYLCRDAQEILNTAWR 387
Query: 199 QTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMI---- 254
+DN PQ +V + + K + + + I
Sbjct: 388 GMIDNGILGIGPQAVVNSSVLTPVDGNWELAPYKLWKTNDRATVNAQFEAQRAFGIFDIG 447
Query: 255 ---EKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRT 311
++ +++ + + +G+ I+ G ++ T S++ + V+
Sbjct: 448 SRQQELANIIQLSKSFMDEESGLPMIAQGEQGQV--TPTLGGMSMLMNAANAVRRRQVKE 505
Query: 312 LAQGL-EILFRGLLRLIIQHQDKVRM 336
+ + L R + + +
Sbjct: 506 WDDSVTKPLIRRFYEYNMNMSEDSSI 531
>gi|153212119|ref|ZP_01947936.1| hypothetical protein A55_1887 [Vibrio cholerae 1587]
gi|124116915|gb|EAY35735.1| hypothetical protein A55_1887 [Vibrio cholerae 1587]
Length = 740
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/351 (14%), Positives = 108/351 (30%), Gaps = 43/351 (12%)
Query: 24 REDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLIS 83
+ G + + I R S AV P +F+ + I+ S + YLTR L+
Sbjct: 196 MDQTGIEQWEAVIERSAS---PSARAVMPWDFVPDMSATSIDDSEFTFERSYLTRKKLLK 252
Query: 84 -----MGYDRESINNLPIISSQNIE----------NTWKFPKNQYSDKALEMIEYYELYV 128
GY +++ L ++ N + E +E +
Sbjct: 253 TMTEQAGYVAKNVRELAEKEPRDSHALTEDVLGTINQIRALNGLQPTYKDRRYEIWEYHG 312
Query: 129 TIDYD-------------GDGIAELRRVIMAGGTGKDNILCNEEWNEL--PFTCLRAMRA 173
I + +E+ VI+ G G ++ P++ A
Sbjct: 313 PIPREVLQEAGLLTEEEFESTPSEVDGVIVMSGCGLILKAGINPFDTEEWPYSVYCAEED 372
Query: 174 PHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKP 233
C G + + Q I R +DN Q +V + +++ ++ + K
Sbjct: 373 VSCIFGYGIPHLCSDAQSILNTAWRAMIDNGVATVGDQIVVNQSALMPADNDWSFSPLKV 432
Query: 234 IRVAAGMDIRSVLGIHSVPMI-------EKSFSMLHYLDQELVDRTGISDISSGFSPEIL 286
+ + + + + +++ + + +G+ IS G ++
Sbjct: 433 WKTTDKASVSAQFEAQKAFGVFSLQNRQAEYANIISMAKAFMDEESGLPMISQGEQGQV- 491
Query: 287 QNMTATATSLIEQSGVGQVELIVRTLAQGL-EILFRGLLRLIIQHQDKVRM 336
T S++ + V+ + + L R +Q K +
Sbjct: 492 -TPTLGGMSMLMNAANAVRRRQVKEWDDSVTKPLIRRFYAWNMQFSKKNEI 541
>gi|209544596|ref|YP_002276825.1| hypothetical protein Gdia_2465 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532273|gb|ACI52210.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 730
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 94/318 (29%), Gaps = 32/318 (10%)
Query: 48 DAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWK 107
+ V P I+ + + + ++ L Y E + + +
Sbjct: 235 ETVDPLRLCINYKAKSFATAARMTEEIDL---------YPWEIEERIRAGLFLDEDYGTN 285
Query: 108 FPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL------------ 155
S + + E + D DGDG AE V +A +G+ +
Sbjct: 286 HDDG--SQDEDAPVTFLEQHRRWDLDGDGYAEPYIVTIARDSGQLARIVAGFDADGVMFD 343
Query: 156 ----CNEEWNELPFTC-LRAMRAPHC-FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
+ +P+ + + +P + + + L Q D + N
Sbjct: 344 PVTHRIRKIEAVPYYTRFQFIPSPQSAIYAMGFGSLLYPLNGAINTSLNQMFDAGHLANA 403
Query: 210 PQTIVQEG-SIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQEL 268
+ G S+ K + +++ + F +L YL +
Sbjct: 404 GGGFIGSGMSLNTGSVRFQVGEYKVVNTPGATLRENMVPLQFPGPSPALFQLLQYLVEAG 463
Query: 269 VDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII 328
+ I DI SG P N + Q G+ I + + + L F L RL
Sbjct: 464 REIASIKDILSGAMP--GGNTPGILGLAVIQQGMKVFSAIFKRVHRALGAEFDKLYRLNR 521
Query: 329 QHQDKVRMVRLRDQWVSF 346
+ RL +Q+
Sbjct: 522 LYLPDDAGYRLGEQYFEV 539
>gi|162149432|ref|YP_001603893.1| hypothetical protein GDI_3670 [Gluconacetobacter diazotrophicus PAl
5]
gi|161788009|emb|CAP57613.1| hypothetical protein GDI3670 [Gluconacetobacter diazotrophicus PAl
5]
Length = 907
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 33/318 (10%)
Query: 48 DAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWK 107
+ V P I ++ +P + ++ L Y E + + E
Sbjct: 213 ETVDPLRLCIDYNAKSFAAAPRITEEIDL---------YPWEVEEKIRAGLFLDDEYGCN 263
Query: 108 FPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL------------ 155
+ + E + D DGDG AE V +A +G+ +
Sbjct: 264 HDAGD---DEDAPVTFLEQHRRYDLDGDGYAEPYIVTIARDSGRLARIVAGFESEGVIFG 320
Query: 156 ----CNEEWNELPFTC-LRAMRAPHC-FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
+ + + + +P + + L Q D + N
Sbjct: 321 AADHRIRRIDAVAYYTKFPFIPSPDSAIYDIGFGTLLHPLNAAVNTSLNQMFDAAHLANA 380
Query: 210 PQTIVQEG-SIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQEL 268
+ G S+ K + +++ + F +L +L
Sbjct: 381 GGGFIGSGMSLNSGSVRFQIGEYKVVNTPGATLRENLVPMQFSGPNPVLFQLLGFLVDAG 440
Query: 269 VDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII 328
+ + DI SG P N+ + Q G+ I + + + L + FR L RL
Sbjct: 441 REIASVKDILSGAMP--GGNVPGVLGLAVIQQGLKVFSAIFKRIHRSLGMEFRKLYRLNR 498
Query: 329 QHQDKVRMVRLRDQWVSF 346
+ R ++
Sbjct: 499 IYLPDEAGFRAGAEYFRV 516
>gi|115304377|ref|YP_762669.1| PfWMP4_39 [Cyanophage Pf-WMP4]
gi|113201871|gb|ABI33183.1| PfWMP4_39 [Phormidium phage Pf-WMP4]
Length = 641
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/339 (14%), Positives = 106/339 (31%), Gaps = 24/339 (7%)
Query: 23 HREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLI 82
D D+ + R + ++ ++ +SP + + V +L TR +L
Sbjct: 176 ETGDIFGGWEDVAVNR--QRSELRIEPLSPYDVWLDTSGGK-NTGTFV--RLRHTREELH 230
Query: 83 SM----GYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIA 138
+ YD + + + + N ++IEYY + +G
Sbjct: 231 ELVTSGYYDLDLTQVEQYVDYKFADPDTPKDVNGTDTSGWDIIEYY---GPLLVEGVQFW 287
Query: 139 ELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLR 198
+ V G + ++ W PF + G S+ + + VL
Sbjct: 288 CVHAVFY--GKQLIRLSDSKYWCGSPFVTTTLLPDRDSVYGMSVLHPNLGALHVLNVLTN 345
Query: 199 QTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSF 258
LDNL + E I+ E + + G +VA ++ + ++ +
Sbjct: 346 GRLDNLVLHINKMWTLVEDGILKRED-VKAKPGAVFKVAQHGSLQPIDMGRQDFVVT--Y 402
Query: 259 SMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLE- 317
+ + T + +P + +TA + +G ++ + +
Sbjct: 403 QEAQVQESSVYRNTSTGPLIGNAAPRGGERVTAAEIQGVRDAGGNRLSSVHTHIEDSSTL 462
Query: 318 ILFRGLLRLIIQHQDKVRMVRL------RDQWVSFDPRY 350
L + L+ Q +R+ D + P Y
Sbjct: 463 PLLNKVFSLLQQFYVTPETIRMYVPEEQMDGFFEVSPEY 501
>gi|209544682|ref|YP_002276911.1| hypothetical protein Gdia_2553 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532359|gb|ACI52296.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 707
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 91/318 (28%), Gaps = 33/318 (10%)
Query: 48 DAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWK 107
+ V P I ++ +P + ++ L Y E + + E
Sbjct: 202 ETVDPLRLCIDYNAKSFAAAPRITEEIDL---------YPWEVEEKIRAGLFLDDEYGCN 252
Query: 108 FPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL------------ 155
+ + E + D DGDG AE V +A +G+ +
Sbjct: 253 HDAGD---DEDAPVTFLEQHRRYDLDGDGYAEPYIVTIARDSGRLARIVAGFESEGVIFG 309
Query: 156 ----CNEEWNELPFTC-LRAMRAPHC-FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
+ + + + +P + + L Q D + N
Sbjct: 310 AADHRIRRIDAVAYYTKFPFIPSPDSAIYDIGFGTLLHPLNAAVNTSLNQMFDAAHLANA 369
Query: 210 PQTIVQEG-SIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQEL 268
+ G S+ K + +++ + F +L +L
Sbjct: 370 GGGFIGSGMSLNSGSVRFQIGEYKVVNTPGATLRENLVPMQFSGPNPVLFQLLGFLVDAG 429
Query: 269 VDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII 328
+ + DI SG P N+ + Q G+ I + + + L + FR L RL
Sbjct: 430 REIASVKDILSGAMP--GGNVPGVLGLAVIQQGLKVFSAIFKRIHRSLGMEFRKLYRLNR 487
Query: 329 QHQDKVRMVRLRDQWVSF 346
+ R ++
Sbjct: 488 IYLPDEAGFRAGAEYFRV 505
>gi|239907145|ref|YP_002953886.1| hypothetical protein DMR_25090 [Desulfovibrio magneticus RS-1]
gi|239797011|dbj|BAH76000.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 682
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/325 (12%), Positives = 86/325 (26%), Gaps = 28/325 (8%)
Query: 44 KVCVDAVSPDEFLIHPDS-VDIEKSPIVGRKLYLTRSDLISM----GYDRESINNL---- 94
+ VSP F + + + + D++ + G+D + +
Sbjct: 210 RPYYRRVSPWSFYWDQSANRRMGDCRYGYEEYRMVYGDVLELAGRTGFDGDVVRAYLAEK 269
Query: 95 --PIISSQNIENTWKFPKNQYSDKALE-MIEYYELYVTIDYDGDGI------------AE 139
+ + E+ + + L+ E Y + D
Sbjct: 270 RDGDATEYDFESQLRSINGGTPEPQLQGRWRVLERYGWLRGDELEECGVDLGNDPVQADY 329
Query: 140 LRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQ 199
V M GG + E PF R G + + Q ++R
Sbjct: 330 FCNVWMLGGKIIKAVRAPIRGVEFPFQIFPMFRDDSSLCGLGVTGVYRDAQSAINAVVRA 389
Query: 200 TLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFS 259
+DN P V ++ N + G ++ G D+ + +
Sbjct: 390 MMDNARMSLGPIGGVNVPALQQTLDADNIRGGTWLKFDTGEDMSKAITFWQASSHTSDYL 449
Query: 260 MLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEIL 319
L ++ D + G T S++ + + +V+ +
Sbjct: 450 ALAKYFDDMGDELTVPRWVHGDGNVSDAARTLGGLSMLMNAMSINLAEMVKIFDDEVTSQ 509
Query: 320 F-RGLLRLIIQHQDKVRMVRLRDQW 343
F L + + ++ +
Sbjct: 510 FVTALYHWNMDFNPRPD---IKGDF 531
>gi|227821703|ref|YP_002825673.1| hypothetical protein NGR_c11350 [Sinorhizobium fredii NGR234]
gi|227340702|gb|ACP24920.1| hypothetical protein NGR_c11350 [Sinorhizobium fredii NGR234]
Length = 348
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 15/169 (8%)
Query: 6 FIHMLIKDSDVEVLEHSHREDGG--------EKVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+ L+ D DVEVLE ++ ++++RIRR G + AV +EFLI
Sbjct: 152 ALVQLVADDDVEVLEQESYQEQIDTPQGPQSVTLYNVRIRRTKEYGCTKLAAVPLEEFLI 211
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIE-------NTWKFPK 110
HPD++ I+ SPI G K L RSDL++MGYDRE ++ SS N E F +
Sbjct: 212 HPDAMSIDDSPITGIKTRLRRSDLVAMGYDREKVDKFATASSSNEEETEEFARRREPFDE 271
Query: 111 NQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEE 159
KAL+ ++YYELYV ID D DGIAELRR+ AGG + N+L +EE
Sbjct: 272 KDEIIKALQEVDYYELYVKIDVDDDGIAELRRMCFAGGLAEVNLLDDEE 320
>gi|228905598|ref|ZP_04069542.1| hypothetical protein bthur0014_66580 [Bacillus thuringiensis IBL
4222]
gi|228854038|gb|EEM98752.1| hypothetical protein bthur0014_66580 [Bacillus thuringiensis IBL
4222]
Length = 707
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 110/301 (36%), Gaps = 13/301 (4%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISM-GYDRESINNLPIISSQ 100
G++ P I P + E+ + + + G D + N+ ++
Sbjct: 177 TGEIRCRICDPLTVYIDPAAEMDEEIRWIVERKPRDIDYIQERYGKDVAADENVGFAAAF 236
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
++ F + M++ + +V +AGG D +E
Sbjct: 237 DVTPQNGFNSTSKKRPNMAMVDEMWVKPC-----GKHPNGLKVTIAGGQLLDI---DENA 288
Query: 161 NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSII 220
++PF + P E+ ++ IQ+ ++ + +V GS +
Sbjct: 289 GDIPFFIFGDIPIPGSVKAEAFIKDMLPIQREINIMRSMFATHARKMGNSMWLVPMGSSV 348
Query: 221 DPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
D + + N + G I ++ + + + +L+ D ++ D +G +IS G
Sbjct: 349 DEDEITNEEGG--IVHYTPIEGARPERVGAPDIPSFYDRILNNHDADIDDLSGAREISQG 406
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLR 340
P L T + SL+ + ++ + + G++ L + +L L+ +H + RM R+
Sbjct: 407 RLPSGL--DTYSGLSLMVEQENEKLAVSSQNYEHGMKRLLQRVLMLMKKHYTEERMARIL 464
Query: 341 D 341
Sbjct: 465 G 465
>gi|291529975|emb|CBK95560.1| hypothetical protein EUS_02210 [Eubacterium siraeum 70/3]
Length = 534
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 108/314 (34%), Gaps = 17/314 (5%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLP-IISSQ 100
G + + P DIE+S + + R L M + + ++
Sbjct: 139 MGDIAIRNADILNLFWEPGIKDIEESANLFYVTLVDRERLNLMYPELCEDDTESVAGGTE 198
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
N+E K S K + YY+ + +G +L G + +E
Sbjct: 199 NVEKYKTEDKTDDSAKVEVIDWYYKKTI------NGRKQLCYCKFCGDRVIYSSEDDESC 252
Query: 161 -------NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTI 213
+ PF G + + Q L + L + ++ +
Sbjct: 253 ADGFYKHSRYPFVMDTLFVQEGTPCGFGYIDVMRDAQMYIDKLSQVVLAHTVMMSRKRYF 312
Query: 214 VQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+++ S ++ + + + + VA + + I + P+ + L + EL + +G
Sbjct: 313 IRQNSAVNEAEFADLK-NRFVHVAGNLGEEDIREIKAEPLDSSVMNALSFKIDELKETSG 371
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDK 333
D S G + A+A + ++++G +++ + + ++ LI Q D
Sbjct: 372 NRDFSQGSVSNGVTA--ASAIAALQEAGSKLSRDMIKGTYFAFQQVCYLIIELIRQFYDT 429
Query: 334 VRMVRLRDQWVSFD 347
R R+ + +FD
Sbjct: 430 PRSFRITGGYDAFD 443
>gi|330958837|gb|EGH59097.1| hypothetical genomic island protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 699
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/389 (13%), Positives = 113/389 (29%), Gaps = 62/389 (15%)
Query: 14 SDVEVLEHSHREDGGEKVHDLRIRRKYSQ-GKVCVDAVSPDEFLIHPDSV--DIEKSPIV 70
+ +V + G D+R+ + + G+V VD + P + + PD+ D + V
Sbjct: 120 KETQVFADGMIQQRG--YFDIRMSYEDTILGEVRVDILDPLDVIPDPDANSYDPDDWADV 177
Query: 71 GRKLYLTRSDLISM-------------------------------GYDRESINNLPIISS 99
++T+ ++ ++ G D ++
Sbjct: 178 TVTRFMTQIEIEALYGTSAKKSIEDEESDSGLIGIDGTDHDRNGFGDDEGFVDEFLSDEK 237
Query: 100 QNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEE 159
+ Q+ + + + L ++I GG +
Sbjct: 238 DKPGKRHRVVDRQFWQMDMAEVIITPTGDIRLVEDVKPEVLAQMIENGGIQSKRRIKRVR 297
Query: 160 W-----------NELPFTCL---RAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLY 205
W + PF L I Q++ + Q L L
Sbjct: 298 WLVSTKETVLHDDWSPFNHFTVVPFFPTFRRGHTRGLVDDAIGPQQLLNKAMSQYLHVLN 357
Query: 206 WQNQPQTIVQEGSIIDPESVLNPQFGKP-----IRVAAGMDIRSVLGIHSVPMIEKSFSM 260
I G++ + G + + I + +
Sbjct: 358 TSANSGWITVAGTLANMRDEELANRGSETGLHLMIKSKTPVEDRPQKIQPNQVPTGIDRL 417
Query: 261 LHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILF 320
+ L TGI++ SG + + A + + Q+ + + LA+ ++L
Sbjct: 418 IDRAGALLEQSTGINEAMSGNQGNEVSGI---AIQTRQFAAQQQLAVPLDNLARTRQMLA 474
Query: 321 RGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
+L +I D+ R++R+ DPR
Sbjct: 475 TRMLEMIQVFYDQPRIIRIT----ETDPR 499
>gi|319956914|ref|YP_004168177.1| hypothetical protein Nitsa_1175 [Nitratifractor salsuginis DSM
16511]
gi|319419318|gb|ADV46428.1| hypothetical protein Nitsa_1175 [Nitratifractor salsuginis DSM
16511]
Length = 561
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 99/301 (32%), Gaps = 27/301 (8%)
Query: 43 GKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNI 102
G++ ++ V + P++ ++ ++ T +L + N S
Sbjct: 137 GQLRIERVKLKNMYLDPNASNVFDIQYCVHRVTTTIGNLRQQFGRKFKWKNYIGDSEDGT 196
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNE 162
S + + Y+ V L +
Sbjct: 197 SYLSSADLGDASRIEVRDVYRYQSGKWY------------VSTVLPGDAFVRLDEPLKDG 244
Query: 163 LPFTCLRAMRAPHCF--------IGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
LPF G S +I +Q+ TV Q +D + + +
Sbjct: 245 LPFIIGSVEPQFVRLDESNAVEAYGGSFIEPMIPLQEEYTVTRNQQIDAIAESLSKRFLA 304
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ S ++ + +L+ + + V + + + F + LD E+ + +GI
Sbjct: 305 TKTSGLNEKDLLSNRTKISVSSLNE-----VKELQAPRIDPSIFG-IDRLDSEMQEVSGI 358
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDK 333
+ + G + N TAT S++ + G + IVR L + E R ++RLI ++ +
Sbjct: 359 TKYNQGLNDPHNLNQTATGVSILTEEGNAVIADIVRALNESFFEPAIRRMVRLIYKYGES 418
Query: 334 V 334
Sbjct: 419 P 419
>gi|75761880|ref|ZP_00741807.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228905318|ref|ZP_04069295.1| hypothetical protein bthur0014_63940 [Bacillus thuringiensis IBL
4222]
gi|228937950|ref|ZP_04100577.1| hypothetical protein bthur0008_6260 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970830|ref|ZP_04131470.1| hypothetical protein bthur0003_6170 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977404|ref|ZP_04137799.1| hypothetical protein bthur0002_6190 [Bacillus thuringiensis Bt407]
gi|74490640|gb|EAO53929.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228782381|gb|EEM30564.1| hypothetical protein bthur0002_6190 [Bacillus thuringiensis Bt407]
gi|228788955|gb|EEM36894.1| hypothetical protein bthur0003_6170 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821741|gb|EEM67742.1| hypothetical protein bthur0008_6260 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228854317|gb|EEM98998.1| hypothetical protein bthur0014_63940 [Bacillus thuringiensis IBL
4222]
gi|326938429|gb|AEA14325.1| Phage protein [Bacillus thuringiensis serovar chinensis CT-43]
Length = 707
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 110/301 (36%), Gaps = 13/301 (4%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISM-GYDRESINNLPIISSQ 100
G++ P I P + E+ + + + G D + N+ ++
Sbjct: 177 TGEIRCRICDPLTVYIDPAAEMDEEIRWIVERKPRDIDYIKERYGKDVAADENVGFAAAF 236
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
++ F + M++ + +V +AGG D +E
Sbjct: 237 DVTPQNGFNSTSKKRPNMAMVDEMWVKPC-----GKHPNGLKVTIAGGQLLDI---DENA 288
Query: 161 NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSII 220
++PF + P E+ ++ IQ+ ++ + +V GS +
Sbjct: 289 GDIPFFIFGDIPIPGSVKAEAFIKDMLPIQREINIMRSMFATHARKMGNSMWLVPMGSSV 348
Query: 221 DPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
D + + N + G I ++ + + + +L+ D ++ D +G +IS G
Sbjct: 349 DEDEITNEEGG--IVHYTPIEGVRPERVGAPDIPSFYDRILNNHDADIDDLSGAREISQG 406
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLR 340
P L T + SL+ + ++ + + G++ L + +L L+ +H + RM R+
Sbjct: 407 RLPSGL--DTYSGLSLMVEQENEKLAVSSQNYEHGMKRLLQRVLLLMKKHYTEERMARIL 464
Query: 341 D 341
Sbjct: 465 G 465
>gi|167749268|ref|ZP_02421395.1| hypothetical protein EUBSIR_00219 [Eubacterium siraeum DSM 15702]
gi|167657761|gb|EDS01891.1| hypothetical protein EUBSIR_00219 [Eubacterium siraeum DSM 15702]
Length = 534
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 107/314 (34%), Gaps = 17/314 (5%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLP-IISSQ 100
G + + P DIE+S + + R L M + +
Sbjct: 139 MGDIAIRNADILNLFWEPGIKDIEESANLFYVTLVDRERLNLMYPELCGEEPESVAGGTG 198
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
N+E K S K + YY+ + +G +L G + +E
Sbjct: 199 NVEKYKTEDKTDDSAKVEVVDWYYKKTI------NGRKQLCYCKFCGDRVIYSSEDDESC 252
Query: 161 -------NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTI 213
+ PF G + + Q L + L++ ++ +
Sbjct: 253 ADGFYKHSRYPFVMDTLFVQEGTPCGFGYIDVMRDAQMYIDKLSQVVLEHTVMMSRKRYF 312
Query: 214 VQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+++ S ++ + + + + VA + + I + P+ + L + EL + +G
Sbjct: 313 IRQNSAVNEAEFADLK-NRFVHVAGNLGEEDIREIKAEPLDSSVMNALSFKIDELKETSG 371
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDK 333
D S G + A+A + ++++G +++ + + ++ LI Q D
Sbjct: 372 NRDFSQGSVSNGVTA--ASAIAALQEAGSKLSRDMIKGTYFAFQQVCYLIIELIRQFYDT 429
Query: 334 VRMVRLRDQWVSFD 347
R R+ + +FD
Sbjct: 430 PRSFRITGGYDAFD 443
>gi|291556862|emb|CBL33979.1| hypothetical protein ES1_09090 [Eubacterium siraeum V10Sc8a]
Length = 534
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/314 (15%), Positives = 106/314 (33%), Gaps = 17/314 (5%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLP-IISSQ 100
G + + P DIE+S + + R L M + +
Sbjct: 139 MGDIAIRNADILNLFWEPGIKDIEESANLFYVTLVDRERLNLMYPELCGEEPESVAGGTG 198
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
N+E K S K + YY+ + +G +L G + +E
Sbjct: 199 NVEKYKTEDKTDDSAKVEVVDWYYKKTI------NGRKQLCYCKFCGDRVIYSSEDDESC 252
Query: 161 -------NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTI 213
+ PF G + + Q L + L++ ++ +
Sbjct: 253 ADGFYKHSRYPFVMDTLFVQEGTPCGFGYIDVMRDAQMYIDKLSQVVLEHTVMMSRKRYF 312
Query: 214 VQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+++ S ++ + + + + VA + + I + P+ + L EL + +G
Sbjct: 313 IRQNSAVNEAEFADLK-NRFVHVAGNLGEEDIREIKAEPLDSSVMNALSLKIDELKETSG 371
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDK 333
D S G + A+A + ++++G +++ + + ++ LI Q D
Sbjct: 372 NRDFSQGSVSNGVTA--ASAIAALQEAGSKLSRDMIKGTYFAFQQVCYLIIELIRQFYDT 429
Query: 334 VRMVRLRDQWVSFD 347
R R+ + +FD
Sbjct: 430 PRSFRITGGYDAFD 443
>gi|148747833|ref|YP_001285799.1| portal protein [Phormidium phage Pf-WMP3]
gi|146230066|gb|ABQ12474.1| portal protein [Phormidium phage Pf-WMP3]
Length = 651
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/353 (14%), Positives = 123/353 (34%), Gaps = 20/353 (5%)
Query: 1 MALNYFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPD 60
+AL + + V+V ++ ++ + + + + + P+
Sbjct: 156 LALPWRVETAEVKKKVQVRTPLFEDE---PTFEVVSEEREVKSSPDFEVLDMFDCFYDPN 212
Query: 61 SVDIEKSPIVGRKLYLTRSDLISM---GYDR-----ESINNLPIISSQNIENTWKFPKNQ 112
D + + RKL T++D++++ GY + + + +S ++ +
Sbjct: 213 VTDPNRGAFI-RKLTKTKADILNLLSEGYYYGVDPLDVVEHKCKDTSDTKQDMLSTFQGV 271
Query: 113 YSD--KALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRA 170
+ + +E E + I + V+ G N W PF
Sbjct: 272 TTSLWSPHQNVELLEYWGDIHLEN--KTYHDVVVTIMGNEVLRFEQNPYWCGRPFVIGTY 329
Query: 171 MRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQF 230
+ + + ++ Q LDNL ++ ++ PE V +
Sbjct: 330 IPTARQPYAMGALQPNLGMLHELNIITNQRLDNLELAIDQMYTLRSDGLLQPEDVY-TEP 388
Query: 231 GKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMT 290
GK V+ D++ + S I + +L+ + G + + + +T
Sbjct: 389 GKVFLVSDHGDLQPLANQSSNFSIT--YQESSFLESTIDKNFGTGNYVGANAARSGERVT 446
Query: 291 ATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKVRMVRLRDQ 342
A + + ++G ++ I + + + L +L ++ L+ Q D+ MVR+
Sbjct: 447 AAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLVQQFTDQPGMVRVAGD 499
>gi|257459274|ref|ZP_05624388.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
gi|257443287|gb|EEV18416.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
Length = 516
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 112/302 (37%), Gaps = 23/302 (7%)
Query: 33 DLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESIN 92
++ +S+ + +D VS + P + + + ++YL+ D++S G R
Sbjct: 124 SCAVKVYWSKDRAMIDEVSLQDLYFDPGARGLNDISYLVHRIYLSSEDILSYG-KRGIFR 182
Query: 93 NLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKD 152
+ + + +F + + LY EL R ++ G+
Sbjct: 183 IENKEAFADKKPYERFEIYEIYELRGGKWYVSSLY---------ENELLRDLIELRDGQP 233
Query: 153 NILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQT 212
I+ LP GE S++ +Q V D + Q P+
Sbjct: 234 FIV----GYMLPQIRCTDEEIYVSAYGEPALMSMLPLQNELNVNRNSITDVIRQQVAPKI 289
Query: 213 IVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRT 272
I+ + S+++ + + D S + + I + + L ++ E+ + +
Sbjct: 290 ILGKASMVERGELESVG------TPIYADQPSAVQVLPAGDIGGAMAALQVIENEMSEVS 343
Query: 273 GISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQ 331
G+S +G ++ TAT S++ G +++ +RT + E +F L L+ ++
Sbjct: 344 GVSPQQNG--ATTVRKETATMASIMANEGSVRLQGYIRTFNETFFEPIFERLAFLVWKYA 401
Query: 332 DK 333
D
Sbjct: 402 DP 403
>gi|154174760|ref|YP_001409087.1| hypothetical protein CCV52592_0034 [Campylobacter curvus 525.92]
gi|153793129|gb|EAU00312.2| conserved hypothetical protein [Campylobacter curvus 525.92]
Length = 554
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 28/300 (9%)
Query: 41 SQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDL----ISMGYDRESINNLPI 96
+G ++ V D+ P++ D + ++ L+ DL YD+E+ N L
Sbjct: 134 RKGLPVIEEVELDDIFFDPEAKDHDDIRYYVNRISLSYEDLGNLAKQKIYDKEATNELIS 193
Query: 97 ISSQNIENTWK-FPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL 155
+ + Y + + + D + + I+
Sbjct: 194 RDEAKERRYDRLEIYDVYECENDKWYLSTIADNALLRDKVELKDGCPFILG--------- 244
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+P + + C GE ASI+ +Q+ +D + +P+ IV
Sbjct: 245 -----YMVPQVRDFSEQNFVCAYGEPPLASILPLQEEMNFARNSLIDAMNMHLKPKAIVP 299
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
+ I + + + P I + + +D E+ + +G+S
Sbjct: 300 LSANISRTDLETIGK------PVYAQTPAQITFVPPPNIGSAQINISLIDNEMSEASGVS 353
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDKV 334
+G + TAT S++ G +V+ VR+ + +E LF L L+ ++
Sbjct: 354 PQQNG--ATTPRKETATMASIMANEGSVRVQGYVRSFNETFIEPLFERLAMLVWKYGASE 411
>gi|237748191|ref|ZP_04578671.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379553|gb|EEO29644.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 798
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/329 (11%), Positives = 106/329 (32%), Gaps = 19/329 (5%)
Query: 21 HSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPD-SV--DIEKSPIVGRKLYLT 77
RE + R + +D V + L+ P + D E++ + + + +
Sbjct: 181 EEIRETMAALQERAEVGRTE---GLVIDRVLTENLLVDPSIAEFWDYEQADWMVQIVPMK 237
Query: 78 RSDLISMG---YDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDG 134
++ + D+ +I + S + + F + ++ I E++
Sbjct: 238 KAVAEGLYGYKLDKATIYKHRDMRSSSTGSGRLFSGGKQTNDDDSQICILEIWDKQSQRV 297
Query: 135 DGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKT 194
+AE + + PF L F+G S+ +Q
Sbjct: 298 YTMAEGCEFWLRDPYSPPKVGERWY----PFFLLPFQTVDGHFVGPSIVDLTERLQDEHN 353
Query: 195 VLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKP--IRVAAGMDIRSVLGIHSVP 252
+ ++ E + + + + G+ I ++++ P
Sbjct: 354 SARDRYNEHRDLIKPGYIASAELNEKTLKRFTDSELGEITLIDAGGQPIQQAIMPKSYPP 413
Query: 253 MIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTL 312
+ + +D ++ + +++ TAT ++++QS G+V +
Sbjct: 414 IDPAVYD----TSPVRLDWEMVTGLQDASRSSVVKPKTATEANILQQSLSGRVSEFRDQV 469
Query: 313 AQGLEILFRGLLRLIIQHQDKVRMVRLRD 341
L+ + + ++IQ ++ ++
Sbjct: 470 EDFLQQIAQYTAEILIQELQPEQVEKIMG 498
>gi|121534832|ref|ZP_01666652.1| hypothetical protein TcarDRAFT_1284 [Thermosinus carboxydivorans
Nor1]
gi|121306627|gb|EAX47549.1| hypothetical protein TcarDRAFT_1284 [Thermosinus carboxydivorans
Nor1]
Length = 610
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/351 (14%), Positives = 110/351 (31%), Gaps = 49/351 (13%)
Query: 43 GKVCVDAVSPDEFLIHPDSV--DIEKSPIVGRKLYLTRSDLISMGYD-RESINNLPIIS- 98
GK + VSP + + P+S D+ + + R ++++ DL + + I
Sbjct: 144 GKAVIKRVSPFDIYVDPESREPDLSDAEYICRAKWVSKDDLKRTYPEFADEIEAFAERYD 203
Query: 99 ---------------SQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGD-------- 135
+ + + Y ++ + D
Sbjct: 204 RDEEEECDEDLEPLWYSREKKKCRLVEIWYKRHTMKEYYVIGPGQIVTKDELLPGMMVTH 263
Query: 136 ----GIAELRRVIMAGGTGKDNILCNEEWNELPFT-CLRAMRAPHCFIGESLAASIIEIQ 190
E+R + G +++ + PF I + + +IQ
Sbjct: 264 KFRVPQTEIRCSAIIGDVELEDVPSPYQHGRFPFAPYFAYYVGEEGEIPAGVVRDLQDIQ 323
Query: 191 KIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHS 250
+ + Q L + +++ G + +L + V D S
Sbjct: 324 REQNKRRSQLLHLINTMANRGWLLRRGQEDTKKKLLESGSTPGVVVEYDTDPPKPFDSTS 383
Query: 251 VPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVR 310
VP F L D + +GI++ G EI + A L +++ V QV +
Sbjct: 384 VPTTFAEFEQLG--DADFRQISGINEAMLGQ--EIPSGTSGRAIELRQRTAVTQVAGLFD 439
Query: 311 TLAQGLEILFRGLLR-------LIIQHQDKVRMVRLRD-----QWVSFDPR 349
L + + + LL +I Q+ + + R+ ++V+ + R
Sbjct: 440 NL-RATKEMVLYLLWGSEGAPGIIPQYYTEEKTFRIIGESGKDEFVTINQR 489
>gi|225155390|ref|ZP_03723882.1| hypothetical protein ObacDRAFT_9438 [Opitutaceae bacterium TAV2]
gi|224803846|gb|EEG22077.1| hypothetical protein ObacDRAFT_9438 [Opitutaceae bacterium TAV2]
Length = 672
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/361 (11%), Positives = 107/361 (29%), Gaps = 38/361 (10%)
Query: 12 KDSDVEVLEHSHRE-DGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIV 70
D + EV+ S + G+ V + + S+ ++ ++A++ + ++ + + +
Sbjct: 100 TDFETEVVIGSDYMLESGKVVF--KAFWETSRKRLKIEAINRYDVIVPNWTGRLADCDWI 157
Query: 71 GRKLYLTRSDLISM------GYDRESINNLPIISSQNIE----NTWKFPKNQYSDKALEM 120
++ + D ++IN L + N KF + + + +
Sbjct: 158 VHVQRFSKHAFRRLVKRMAWTIDDDTINALAGQDATNTGAASAEQSKFQRQGITSPSKDD 217
Query: 121 IEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEE---------WNELP----FTC 167
+ + DG + + +L + + LP F
Sbjct: 218 EIVL--WEVYSRNDDGAW---IIKTYSPVRPEQVLRPDFGLPYNQGVFADSLPPPPFFEI 272
Query: 168 LRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLN 227
++ + + + + D + P S + S L
Sbjct: 273 SCELKDRGYYDSRGIVKRVAPFEASLCKDWNTVKDYQTLTSTPILTASARSDVGNNSTLR 332
Query: 228 PQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQ 287
Q G+ + + + + + + Q G+ D +G +
Sbjct: 333 FQPGQVLPF-------PLSAVQMPTLPVDTQQGMLGTRQTAEQLVGVPDFGTGSQQPSGE 385
Query: 288 NMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFD 347
TA SLI V++ R + L + ++ Q+ + + D +
Sbjct: 386 RKTAKEVSLIANVMGQSVDMRARIFRKELAHGLAIMWAILSQYAREELDYFVLDNLIQIP 445
Query: 348 P 348
P
Sbjct: 446 P 446
>gi|315929405|gb|EFV08607.1| hypothetical protein CSS_1407 [Campylobacter jejuni subsp. jejuni
305]
Length = 512
Score = 92.3 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 106/296 (35%), Gaps = 27/296 (9%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDL---ISMGYDRESINNLPIIS 98
+G ++ V D P++++ E + ++YLT + + +G+ ++
Sbjct: 138 KGMPRIERVDIDSIFFDPNALNSEDVGYIVNEIYLTYNQIHERQKLGFYKKIEIKKLFDE 197
Query: 99 SQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNE 158
+ + E + + + + + + I + + NE
Sbjct: 198 DDEYKKVKLY-DIYERKNDDEWVVSTLFENNLLRNEVTLQDGQPFIWGSMLPQLKKIDNE 256
Query: 159 EWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGS 218
+ GE + AS + +Q + +D + P+ ++ +
Sbjct: 257 NYV--------------SAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPKSM 302
Query: 219 IIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDIS 278
+ E + GKPI ++ + P + + L L+ EL + TG+S +
Sbjct: 303 GVSREDIETL--GKPIYTDDPKGVQILP----PPNVNSAGMNLQLLESELTEVTGVSPQN 356
Query: 279 SGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDK 333
+G + QN TAT S+ Q G + +R + +E LF L+ ++ +
Sbjct: 357 NG--AQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLVFKYGED 410
>gi|209548332|ref|YP_002280249.1| hypothetical protein Rleg2_0727 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534088|gb|ACI54023.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 711
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 10/304 (3%)
Query: 39 KYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISM-GYDRESINNLPII 97
+ +VC+D V +FL P + + V R++ +T ++ G + +
Sbjct: 184 VIADERVCIDYVHWSDFLHSP-ARRWKDVTWVARRVPMTDEEMEKRFGAEAMASRAAEGA 242
Query: 98 SSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYD-GDGIAELRRVIMAGGTGKDNILC 156
+ ++ + +N+ + E + DG V C
Sbjct: 243 AGNKADSQAERLENEGKTH---VWEIWCKSENYTVWIADGSPVALEVSEPPLDLTHFWPC 299
Query: 157 NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQ-TLDNLYWQNQPQTI-V 214
+ + P + I + K L Q L Y
Sbjct: 300 PRPAYGT-MSTSSLIPVPDYVYYQQQCDEIDLLTKRINKLTDQLRLKVFYPSGDGAVSPA 358
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
E ++ ++ + ++++ + + + + + Q + D I
Sbjct: 359 IEKAMRPENDMVMVPIPEWAAFTDKGGSKAIVTLPIDEVQKVIVACMQARKQLIEDVYQI 418
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII-QHQDK 333
+ IS + + TATA + Q G ++ LA+ + R +I Q Q +
Sbjct: 419 TGISDIVRGDTQASETATAQRIKSQWGSIRIRDRQAELARFARDIIRLAGEIICDQFQPE 478
Query: 334 VRMV 337
M+
Sbjct: 479 TLML 482
>gi|283956319|ref|ZP_06373799.1| hypothetical protein C1336_000250090 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792039|gb|EFC30828.1| hypothetical protein C1336_000250090 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 512
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 102/304 (33%), Gaps = 43/304 (14%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLIS---MGYDRESINNLPIIS 98
+G ++ V D P++++ E + ++YLT + + +G+ +
Sbjct: 138 KGMPRIERVDIDSIFFDPNALNSEDVGYIVNEIYLTYNQIHERQNLGFYKNIEIQKLFDE 197
Query: 99 SQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNE 158
+ + + Y K + L+
Sbjct: 198 DDEYKKVKLY--DIYERKNDDEWVVSTLF---------------------ENNLLRNKVT 234
Query: 159 EWNELPFTCLRAMRAPHCF--------IGESLAASIIEIQKIKTVLLRQTLDNLYWQNQP 210
+ PF + GE + AS + +Q + +D + P
Sbjct: 235 LQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMP 294
Query: 211 QTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVD 270
+ ++ + + E + GKPI ++ + P + + L L+ EL +
Sbjct: 295 KIMMPKSMGVSREDIETL--GKPIYTDDPKGVQILP----PPNVNSAGMNLQLLESELTE 348
Query: 271 RTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQ 329
TG+S ++G + QN TAT S+ Q G + +R + +E LF L+ +
Sbjct: 349 VTGVSPQNNG--AQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLVFK 406
Query: 330 HQDK 333
+ +
Sbjct: 407 YGED 410
>gi|149408206|ref|YP_001294640.1| hypothetical protein ORF047 [Pseudomonas phage PA11]
Length = 584
Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 95/317 (29%), Gaps = 31/317 (9%)
Query: 45 VCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYD--------------RES 90
+ +SP + + +P + I + T+ +L+ + D E
Sbjct: 165 PRLVRISPLDIVFNPLATSISD-TFKIVRSVKTKGELMRLAQDEPEQSYWLEALKRREEI 223
Query: 91 INNLPIISSQNIENTWKFPKNQ----YSDKALEMIEYYELYVTIDYDGDGIAELRRVIMA 146
+L S ++ + F + Y + +E E Y G + R+I
Sbjct: 224 CRHLGGYSVEDFDKAAGFDVDGFGNLYEYYMSDWVEILEFYGDYHDKETGELQTNRIITV 283
Query: 147 GGTGKDNILC--NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNL 204
+ + P + P +++ +Q L D +
Sbjct: 284 VDRSTEVRNESIPTWFGSAPIYHVGWRFRPDNLWAMGPLDNLVGMQYRIDHLENAKADAV 343
Query: 205 YWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
QP II G I + G D++ + +V I + + + L
Sbjct: 344 DLIIQPPLK-----IIGEVEEFVWGPGAEIHLDQGGDVQEI--AKNVNYIINADNQIQML 396
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLA-QGLEILFRGL 323
+ + G + G TA + + + V T + LE + +
Sbjct: 397 EDRMELYAGAPREAMGI--RTPGEKTAFEVQQLGNAAGRIFQEKVTTFEVELLEPVLNAM 454
Query: 324 LRLIIQHQDKVRMVRLR 340
L ++ D ++R+
Sbjct: 455 LETATRNMDGSDVIRVM 471
>gi|57237581|ref|YP_178595.1| hypothetical protein CJE0579 [Campylobacter jejuni RM1221]
gi|57166385|gb|AAW35164.1| hypothetical protein CJE0579 [Campylobacter jejuni RM1221]
Length = 512
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 106/296 (35%), Gaps = 27/296 (9%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDL---ISMGYDRESINNLPIIS 98
+G ++ V D P++++ E + ++YLT + + +G+ +++
Sbjct: 138 KGMPRIERVDIDSIFFDPNALNSEDVGYIVNEIYLTYNQIHERQKLGFYKKNEIKKLFDE 197
Query: 99 SQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNE 158
+ + E + + + + + + I + + NE
Sbjct: 198 DDEYKKVKLY-DIYERKNDDEWVVSTLFENNLLRNEVTLQDGQPFIWGSMLPQLKKIDNE 256
Query: 159 EWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGS 218
+ GE + AS + +Q + +D + P+ ++ +
Sbjct: 257 NYV--------------SAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPKSM 302
Query: 219 IIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDIS 278
+ E + GKPI ++ + P + + L L+ EL + G+S +
Sbjct: 303 GVSREDIETL--GKPIYTDDPKGVQILP----PPNVNSAGMNLQLLESELTEVIGVSPQN 356
Query: 279 SGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLIIQHQDK 333
+G + QN TAT S+ Q G + +R + +E LF L+ ++ +
Sbjct: 357 NG--AQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLVFKYGED 410
>gi|283852987|ref|ZP_06370245.1| hypothetical protein DFW101DRAFT_2815 [Desulfovibrio sp. FW1012B]
gi|283571597|gb|EFC19599.1| hypothetical protein DFW101DRAFT_2815 [Desulfovibrio sp. FW1012B]
Length = 614
Score = 91.1 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 105/374 (28%), Gaps = 54/374 (14%)
Query: 15 DVEVLEHSHREDGGEKVHDLRIRRKYSQ-------GKVCVDAVSPDEFLIHPDS-VDIEK 66
+ E R + + L + + G+V V P F ++P + DI+
Sbjct: 117 EQEQQAVLERSVLNGETYGLAVEKVVFDPDLEYGLGEVRTVVVDPFAFGVYPTACPDIQD 176
Query: 67 SPIVGRKLYLTRSDLISMGYDR---------------ESINNLPIISSQNIENTWKFPK- 110
+ V +T + + + +F +
Sbjct: 177 AEAVLHFTPMTLREAARRWPEAAGRLTSDAALLADLGDGRREAATGDGSRRGLFARFGEV 236
Query: 111 -------NQYSDKALEMIEYYELYV-TIDYDGDGIAEL---RRVIMAGGTGKDNILCNEE 159
Q + + E +V DG R V +AG G
Sbjct: 237 VRTLAGAGQTDGPSEDTTLVCECWVKDYAMTSDGPRYPGCIRCVTVAGAGGLVLSDRGNP 296
Query: 160 ----------------WNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDN 203
++ PF ++ P G S + E+Q L Q +
Sbjct: 297 SVNPALTPDEAMATYLYDRFPFALANSLTDPASLWGASDFEQLAELQTEVNKCLSQLTYH 356
Query: 204 LYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHY 263
+P+ I S + + N + A+ + + + + S+L
Sbjct: 357 KDRCARPKIINPRDSGVANAAFTNR--LGIVNPASMAAAQGIRYLEFANNTKDIESVLAI 414
Query: 264 LDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+ +G+ ++ SP+ + A S + + + +R ++ + R
Sbjct: 415 YRELFSQISGLGELERAGSPDHPV-IAYKAISALIEQAATLLRGKIRNYSRLVRERGRMF 473
Query: 324 LRLIIQHQDKVRMV 337
L + + R +
Sbjct: 474 LSHMQNWYTEERWI 487
>gi|313113989|ref|ZP_07799544.1| hypothetical protein HMPREF9436_01396 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623691|gb|EFQ07091.1| hypothetical protein HMPREF9436_01396 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 649
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/317 (13%), Positives = 107/317 (33%), Gaps = 25/317 (7%)
Query: 43 GKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNI 102
G++C+ +V+ P DI+ +P + + L SS ++
Sbjct: 172 GEICIRSVNLLMLYWEPGVEDIQDTPHLFSLSLMDNDQLEGRYPQ----MAGHTGSSMDV 227
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNE 162
DK++ + YY+ + G L G + ++ +
Sbjct: 228 AKYIHDDSIDTGDKSVVVDWYYKKAL-----EGGQTVLHYCKYCNGVVLYASENDPQYAQ 282
Query: 163 L--------PFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
PF R G + + Q + +N+ + + ++
Sbjct: 283 RGFYDHGKYPFVFDPLFREEDSPAGFGYIDVMKDTQTAIDEMNHAMDENVKLAAKARYVL 342
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + ++ E + + + V + S + + + S EL + +G
Sbjct: 343 SDTAGVNEEELADFGKD-IVHVVGRLTDDSFRPLQTNVLSGNCISYRDARVSELKEISGN 401
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
D+S G + L A+A + ++++G ++++ + ++ L+ Q D+
Sbjct: 402 RDVSQGGTTSGLTA--ASAIAALQEAGSKLSRDMLKSAYRTFAKECYLVIELMRQFYDEE 459
Query: 335 RMVRLRD-----QWVSF 346
R+ R+ ++V F
Sbjct: 460 RVYRITGESGGVEYVPF 476
>gi|153951607|ref|YP_001398216.1| hypothetical protein JJD26997_1133 [Campylobacter jejuni subsp.
doylei 269.97]
gi|153952365|ref|YP_001397542.1| hypothetical protein JJD26997_0326 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939053|gb|ABS43794.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939811|gb|ABS44552.1| hypothetical protein JJD26997_0326 [Campylobacter jejuni subsp.
doylei 269.97]
Length = 507
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 108/306 (35%), Gaps = 47/306 (15%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDL---ISMGYDRESINNLPIIS 98
+G ++ V D P++++ E + ++YLT +++ +G+ ++ P +
Sbjct: 136 KGMPRIERVGIDSIFFDPNALNSEDVGYIVNEIYLTYNEIYERQKLGFYKK--LETPKLL 193
Query: 99 SQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNE 158
+ E + Y K + L+ ++++L NE
Sbjct: 194 DEEDEYKKVKLYDIYERKNDDAWVVSTLF-----------------------ENHLLRNE 230
Query: 159 EW--NELPFTCLRAMRAPHCF--------IGESLAASIIEIQKIKTVLLRQTLDNLYWQN 208
+ PF + GE + AS + +Q + +D +
Sbjct: 231 VILQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHI 290
Query: 209 QPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQEL 268
P+ ++ + + E + D + I P + + L L+ EL
Sbjct: 291 MPKIMLPKSMGVSREDIETLGK------PLYTDDPKGVQILPPPDVNSAGMNLQLLESEL 344
Query: 269 VDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQ-GLEILFRGLLRLI 327
+ TG+S ++G + N TAT S+ Q G + +R + +E LF L+
Sbjct: 345 TEVTGVSPQNNG--AQTAHNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLV 402
Query: 328 IQHQDK 333
++ +
Sbjct: 403 FKYGED 408
>gi|303245700|ref|ZP_07331983.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302492963|gb|EFL52828.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 602
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/374 (12%), Positives = 103/374 (27%), Gaps = 54/374 (14%)
Query: 15 DVEVLEHSHREDGGEKVHDLRIRRKYSQ-------GKVCVDAVSPDEFLIHP-DSVDIEK 66
+ E R + + + + + G+V V P F ++P DI+
Sbjct: 117 EQEQQAIFERSVINGETYGVAVEKVVFDPDLEYGLGEVRTVVVDPFAFGVYPTSCPDIQD 176
Query: 67 SPIVGRKLYLTRSDLISMGYDR---------------ESINNLPIISSQNIENTWKFPK- 110
+ V ++ + + +F +
Sbjct: 177 AEAVLHFTPMSLREAKRRWPKAAGKLTSDAALLAQLGDGRREAITGDGSRQGLFGRFGEV 236
Query: 111 -------NQYSDKALEMIEYYELYVT-IDYDGDGIAEL---RRVIMAGGTGKDNILCNEE 159
+ + + E + DGD R V +AG
Sbjct: 237 VRTIVGASGGDGPSDDATLVCECWARDYTMDGDMPRYPGFIRCVTVAGAGEVVLSDQGNP 296
Query: 160 ----------------WNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDN 203
++ PF ++ P G S + E+Q L Q +
Sbjct: 297 SINPELQEAEAVASYLYDRFPFALANSLTDPASLWGASDFEQLAELQLEVNKCLSQLTYH 356
Query: 204 LYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHY 263
+P+ I S + + N Q + A+ + + + + S+L
Sbjct: 357 KDRCARPKIINPRDSGVANAAFTNRQ--GIVNPASMAAAQGIRYLEFTNNTKDIESVLGI 414
Query: 264 LDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+ +GI +I +P+ + A + + + + +R ++ + R
Sbjct: 415 YREMFSQISGIGEIERATAPDHPV-IAYKAIAALIEQAATLLRGKIRNYSRLIRERGRMF 473
Query: 324 LRLIIQHQDKVRMV 337
L + + R +
Sbjct: 474 LSHMQNWYTEERWI 487
>gi|327189473|gb|EGE56633.1| hypothetical protein RHECNPAF_608006 [Rhizobium etli CNPAF512]
Length = 694
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 87/298 (29%), Gaps = 8/298 (2%)
Query: 44 KVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIE 103
+VC+D V +FL P + + V R++ +T ++ +
Sbjct: 177 RVCIDYVHWSDFLHSP-ARRWKDVTWVARRVPMTDEEMEKRFGREAM--ASGAAQAAAGG 233
Query: 104 NTWKFPKNQYSDKALEMIEYYELYVTIDYD-GDGIAELRRVIMAGGTGKDNILCNEEWNE 162
+ ++ + E + DG V C
Sbjct: 234 KGASQAERAENEGKTHVWEIWCKSENYTVWIADGSPVALEVSEPPLELTHFWPCPRPAYG 293
Query: 163 LPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQ-TLDNLYWQNQPQTI-VQEGSII 220
+ + P + I + K L Q L Y E ++
Sbjct: 294 TV-STSSLIPVPDYVYYQQQCDEIDLLTKRINKLTDQLRLKVFYPSGDGAISPAIEKAMR 352
Query: 221 DPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
++ + ++V+ + + + + + Q + D I+ IS
Sbjct: 353 PENDMVMVPIPEWAAFTDKGGSKAVVTLPIDEVQKVIVACMAARKQLIEDVYQITGISDI 412
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII-QHQDKVRMV 337
+ + TATA + Q G ++ LA+ + R +I Q Q + M+
Sbjct: 413 VRGDTQASETATAQRIKSQWGSIRIRDRQAELARFARDIIRLAGEIICDQFQPETLML 470
>gi|86356737|ref|YP_468629.1| hypothetical protein RHE_CH01094 [Rhizobium etli CFN 42]
gi|86280839|gb|ABC89902.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 701
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 86/298 (28%), Gaps = 8/298 (2%)
Query: 44 KVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIE 103
+VC+D V +FL P + + V R++ + ++ +
Sbjct: 177 RVCIDYVHWSDFLHSP-ARRWKDVTWVARRVPMADEEMEKRFGREAM--ASGAAQAAAGG 233
Query: 104 NTWKFPKNQYSDKALEMIEYYELYVTIDYD-GDGIAELRRVIMAGGTGKDNILCNEEWNE 162
+ ++ + E + DG V C
Sbjct: 234 KGASQAERAENEGKTHVWEIWCKSENYTVWIADGSPVALEVSEPPLELTHFWPCPRPAYG 293
Query: 163 LPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQ-TLDNLYWQNQPQTI-VQEGSII 220
+ + P + I + K L Q L Y E ++
Sbjct: 294 TV-STSSLIPVPDYVYYQQQCDEIDLLTKRINKLTDQLRLKVFYPSGDGAISPAIEKAMR 352
Query: 221 DPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
++ + ++V+ + + + + + Q + D I+ IS
Sbjct: 353 PENDMVMVPIPEWAAFTDKGGSKAVVTLPIDEVQKVIVACMAARKQLIEDVYQITGISDI 412
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII-QHQDKVRMV 337
+ + TATA + Q G ++ LA+ + R +I Q Q + M+
Sbjct: 413 VRGDTQASETATAQRIKSQWGSIRIRDRQAELARFARDIIRLAGEIICDQFQPETLML 470
>gi|239905065|ref|YP_002951804.1| hypothetical protein DMR_04270 [Desulfovibrio magneticus RS-1]
gi|239794929|dbj|BAH73918.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 584
Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 103/374 (27%), Gaps = 54/374 (14%)
Query: 15 DVEVLEHSHREDGGEKVHDLRIRRKYSQ-------GKVCVDAVSPDEFLIHP-DSVDIEK 66
+ E R + + L + + G+V V P F ++P +DI++
Sbjct: 115 EQEQQAVFERSVINGETYGLAVEKVVFDPELEYGLGEVRTVNVDPFAFGVYPTSCLDIQE 174
Query: 67 SPIVGRKLYLTRSD------------------LISMGYDRESINNLPIISSQNIENTWKF 108
+ V ++ L +G R I +
Sbjct: 175 AEAVLHFAPMSLRQAARRWPEAAGQLKSDAATLADLGDGRREILLGDGRRQGLFTRFGEV 234
Query: 109 PKNQYSDKA-----LEMIEYYELYVT-IDYDGDGIAEL---RRVIMAGGTGKDNILCNEE 159
+ + + E + DG R V++AG
Sbjct: 235 LRQLAGAGGGDALGQDTVLVCECWARDYTMTDDGPLYPGFIRCVVVAGPGSLVLSDQPNP 294
Query: 160 ----------------WNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDN 203
++ PF ++ P G S + E+Q L Q +
Sbjct: 295 SINPALPLDQAMASYLYDRYPFALANSLTDPTTIWGASDFEQLAELQLEINKCLSQLTYH 354
Query: 204 LYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHY 263
+P+ I S +D + N + + + + + S+L
Sbjct: 355 KDRCARPKIINPRDSGVDNAAFTNR--LGIVNPTSMAAAQGIRYLEFANNTRDIESVLTL 412
Query: 264 LDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+ +GI ++ SP+ A + + + + +R ++ + R
Sbjct: 413 YRELFSQISGIGELERAASPDHPVVA-YKAIAALIEQASTLLRGKIRNYSRLVRERGRMF 471
Query: 324 LRLIIQHQDKVRMV 337
L + K R +
Sbjct: 472 LSHMQNWYAKERWI 485
>gi|145642402|ref|ZP_01797960.1| Haemophilus-specific protein, uncharacterized [Haemophilus
influenzae R3021]
gi|145272901|gb|EDK12789.1| Haemophilus-specific protein, uncharacterized [Haemophilus
influenzae 22.4-21]
Length = 313
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 64/208 (30%), Gaps = 12/208 (5%)
Query: 139 ELRRVIMAGGTGKDNILCNEEWN--ELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVL 196
E+ VI+ G GK + + E P++ C G + + Q+I
Sbjct: 22 EIEGVIVMAGNGKILSVNLNPLDTAEFPYSVYTCEPDVCCLFGFGIPYLCRDAQEILNTA 81
Query: 197 LRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMI-- 254
R +DN PQ +V + + K + + I
Sbjct: 82 WRGMIDNGILGIGPQAVVNSSVLTPVDGNWELAPYKLWKTNDRATANAQFEAQRAFGIFD 141
Query: 255 -----EKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIV 309
++ +++ + + +G+ I+ G ++ T S++ + V
Sbjct: 142 IGSRQQELANIIQLSKSFMDEESGLPMIAQGEQGQV--TPTLGGMSMLMNAANAVRRRQV 199
Query: 310 RTLAQGL-EILFRGLLRLIIQHQDKVRM 336
+ + + L R + + +
Sbjct: 200 KEWDDSVTKPLIRRFYEYNMNMSEDASI 227
>gi|288957023|ref|YP_003447364.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
gi|288909331|dbj|BAI70820.1| hypothetical protein AZL_001820 [Azospirillum sp. B510]
Length = 534
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 9/217 (4%)
Query: 134 GDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIK 193
DG A V++ G + L + + PF R ++AP G S + K
Sbjct: 232 PDGAAYRWGVVLDSGLADPSWLAQGRFAQSPFVNFRWLKAPGETYGRSPVMKALPDIKTA 291
Query: 194 TVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPM 253
++ L N + + LNP + + G+ +
Sbjct: 292 NKVVELVLKNASIAVTGIWQADDDGV------LNPSTIRLVPGTIIPKAVGSAGL-TPLA 344
Query: 254 IEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTL 312
F + + +L R + + P MTAT + R
Sbjct: 345 NPGRFDVSQLVLDDLRGRIRHALLVDRLGPVDSARMTATEVLERSVEMARLLGATYGRLQ 404
Query: 313 AQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
A+ + L + ++ + + + + + V R
Sbjct: 405 AELMTPLLLRAVSILRRRGEIPD-ITVDGRLVELQHR 440
>gi|225155663|ref|ZP_03724152.1| hypothetical protein ObacDRAFT_9274 [Opitutaceae bacterium TAV2]
gi|224803636|gb|EEG21870.1| hypothetical protein ObacDRAFT_9274 [Opitutaceae bacterium TAV2]
Length = 657
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 12/282 (4%)
Query: 46 CVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDR-----ESINNLPIISSQ 100
+ V D FL + + + +V + + M +R E + S
Sbjct: 248 RSEIVPSDRFLCPVNVASPDDAKLVAELYDKDIAWIEDMWIERPWAIWEEVKGEFTQSGA 307
Query: 101 NIENTWKFPKNQYSDKALEMIE--YYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNE 158
+ + + + + + E + D G + + + + +
Sbjct: 308 DEKTEGESKAKEDATHDDKESLRKIIECWGRRDVLGLEGPQEFVIFIDEDSERAVFYEFT 367
Query: 159 ----EWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+ PFT + R + G+S+ + + Q+ P V
Sbjct: 368 AKVCPDFKRPFTTIAVGRTRRRWWGKSIPEKVAQYQEKIDENFNGEAYRNLMNANPLKGV 427
Query: 215 QEGSIIDPESVLNPQFGKPIRVA-AGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+ ++ E L K + V K+ + ++ +
Sbjct: 428 NPDATVEEEEDLVFDPEKVYHLKLNKKMEDFVSFAKLPDADFKTRDIAQFVFWFVQRWLH 487
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQG 315
ISD+ +G + +N TAT + ++ R + +G
Sbjct: 488 ISDVGTGDYEALPENNTATGIEINREASQSTSRRWNRRINEG 529
>gi|254523473|ref|ZP_05135528.1| hypothetical protein SSKA14_2606 [Stenotrophomonas sp. SKA14]
gi|219721064|gb|EED39589.1| hypothetical protein SSKA14_2606 [Stenotrophomonas sp. SKA14]
Length = 696
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/353 (11%), Positives = 99/353 (28%), Gaps = 57/353 (16%)
Query: 41 SQGKVCVDAVSPDEFLIHPDSVD--IEKSPIVGRKLYLTRSDLISMGYDRESINNLPIIS 98
+G+V + P + L PD+ + +LT S + Y +++ + + S
Sbjct: 145 DEGEVSLTTFDPRDVLPDPDATSYNPDSWADCSITRWLTHSQI-EQNYGKDAADEIRDSS 203
Query: 99 SQNIENTWKFPKNQ--------YSDKALEMIEY-----YELYVTIDYDGDGIAELRRVIM 145
+ N W + A+ M Y + Y +D +
Sbjct: 204 MAYVHNNWGDEQGMMRDAFGNMPPSYAMNMGWYGEEGTWRRYRVVDRQSHEYQQTLVAKW 263
Query: 146 AGGTGKDNILCNEE------------------------------------WNELPFTCLR 169
I E FT +
Sbjct: 264 PATGDLRIIEGFEPELIGWLIEQGVHVMRRRIRRVRWQVCAPEVCVYDKLSPYDHFTVIP 323
Query: 170 AMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQ 229
+ + ++Q + + Q + + S+ +
Sbjct: 324 YFPYFRRGKTVGMLDNAAQVQDLINKFVSQYAHIVNASANGGWQGEANSLENMTDEEFTS 383
Query: 230 FGKP--IRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQ 287
G + + + I +M+ +L + + T +++ + G +
Sbjct: 384 RGGETGLVLLRKPGTQPFQKIEPNQPPRGIENMIDFLQRNMQTVTAVNESAMG---QGSA 440
Query: 288 NMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLR 340
+M+ A + + + + + L++ ++L L+L+ + R++R+
Sbjct: 441 DMSGIAIQSRQFAAQQALGIALDNLSRTRQMLAERTLKLVQRFYTAPRVIRIA 493
>gi|145589308|ref|YP_001155905.1| hypothetical protein Pnuc_1125 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047714|gb|ABP34341.1| hypothetical protein Pnuc_1125 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 653
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/307 (11%), Positives = 91/307 (29%), Gaps = 16/307 (5%)
Query: 45 VCVDAVSPDEFLIHPDS---VDIEKSPIVGRKLYLTRSD---LISMGYDRESINNLPIIS 98
+ +D V + LI P D + + + + + RS L I
Sbjct: 197 LVIDRVLTENLLIDPSICEFWDYTDADWICQIIPMKRSQAEALYKKNLANAKIYQPGQGE 256
Query: 99 SQNIENTW----KFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNI 154
+ + + + I E++ + + E +
Sbjct: 257 PSHKKAKRLASMQMNAGSGPVTDDQQIAVLEIWDRVTQRVYTMVEGATEWLREPYSPPRA 316
Query: 155 LCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
PF L F+G SL +Q + +
Sbjct: 317 GERWY----PFFLLPYQVIDGQFVGPSLVDLTERLQDEHNEARDRFNQHRDLCIPGWVAS 372
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + + + +FG+ V + + I K +++ D +
Sbjct: 373 ADINEKTIKKHSDSRFGEITIVDTEGKPLNQVIIPRG--HPKIDPIVYDTSAVRYDWEQV 430
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
+ + +++ TAT ++++++ G+V + L+ + + ++++Q K
Sbjct: 431 TGLQDAARSTVVRPKTATEANILQRALSGRVFEFKDQIEDWLQEIAQYSAQVLLQELTKE 490
Query: 335 RMVRLRD 341
++ R
Sbjct: 491 QVERYMG 497
>gi|313115193|ref|ZP_07800677.1| hypothetical protein HMPREF9436_02547 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622471|gb|EFQ05942.1| hypothetical protein HMPREF9436_02547 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 604
Score = 78.4 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 88/264 (33%), Gaps = 21/264 (7%)
Query: 96 IISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL 155
S ++ S K++ + YY+ D G L G
Sbjct: 196 TASVLDVPRYIHDEGQDTSSKSVVVDWYYKR-----PDETGRMVLHYCKFCNGVVLYASQ 250
Query: 156 CN--------EEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQ 207
+ + + PF G + + Q + +N+
Sbjct: 251 NDPALAESGLYDHGQYPFVFDPLFVEEDSPAGFGYIDVMKDCQTAIDKMNHAMDENVLLS 310
Query: 208 NQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQE 267
+ + ++ + + ++ E + + + V ++ S + + + S S +E
Sbjct: 311 AKQRYVLSDTAGVNEEELADFSRD-IVHVVGRLNDDSFRPLQTAGLQGNSLSYRQSRIEE 369
Query: 268 LVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLI 327
L + +G D++ G A+A + ++++G ++++ + ++ L+
Sbjct: 370 LKEISGNRDMTQG--GTAGGVTAASAIAALQEAGSKLSRDMLKSAYRAFAKQCYLIIELM 427
Query: 328 IQHQDKVRMVRLRDQ-----WVSF 346
Q D+ R+ R+ + +V F
Sbjct: 428 RQFYDEQRVFRIVGESGESRFVPF 451
>gi|295103136|emb|CBL00680.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3]
Length = 594
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 110/317 (34%), Gaps = 25/317 (7%)
Query: 43 GKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNI 102
G + V +V+ P DI+ SP + + L + ++
Sbjct: 147 GDIAVRSVNLLMLYWEPGVQDIQDSPDLFHLSLEDTARLTAQYPQ----LTGHAAGVVDV 202
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCN----- 157
++K++ + YY+ D +G L + G +
Sbjct: 203 PRYIHEDGQTTANKSVVVDWYYKR-----PDENGKLRLHYCKLCNGVVLYASQNDPALAA 257
Query: 158 ---EEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+ + PF G + + Q + +N+ ++ + ++
Sbjct: 258 RGLYDHGKYPFVFDPLFVEEDSPAGFGYIDVMKDCQNAIDKMNHAMDENVLLASRQRYVL 317
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + ++ E + + + V ++ S + + + S S + +EL + +G
Sbjct: 318 SDTAGVNEEELADLSRD-IVHVVGRLNEDSFRPLQTAGLQGNSLSYRNSRIEELKEISGN 376
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
D++ G + + A+A + ++++G ++++ + ++ L+ Q D+
Sbjct: 377 RDLTQGGTTGGVTA--ASAIAALQEAGSKLSRDMLKSAYRAFARQCYLIIELMRQFYDEQ 434
Query: 335 RMVRLRD-----QWVSF 346
R+ R+ ++V F
Sbjct: 435 RVFRITGQRGESEFVPF 451
>gi|160945640|ref|ZP_02092866.1| hypothetical protein FAEPRAM212_03169 [Faecalibacterium prausnitzii
M21/2]
gi|158443371|gb|EDP20376.1| hypothetical protein FAEPRAM212_03169 [Faecalibacterium prausnitzii
M21/2]
Length = 594
Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 110/317 (34%), Gaps = 25/317 (7%)
Query: 43 GKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNI 102
G + V +V+ P DI+ SP + + L + ++
Sbjct: 147 GDIAVRSVNLLMLYWEPGVQDIQDSPDLFHLSLEDTARLTAQYPQ----LAGHAAGVVDV 202
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCN----- 157
++K++ + YY+ D +G L + G +
Sbjct: 203 PRYIHEDGQTTANKSVVVDWYYKR-----PDENGKLRLHYCKLCNGVVLYASQNDPALAA 257
Query: 158 ---EEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIV 214
+ + PF G + + Q + +N+ ++ + ++
Sbjct: 258 RGLYDHGKYPFVFDPLFVEEDSPAGFGYIDVMKDCQNAIDKMNHAMDENVLLASRQRYVL 317
Query: 215 QEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
+ + ++ E + + + V ++ S + + + S S + +EL + +G
Sbjct: 318 SDTAGVNEEELADLSRD-IVHVVGRLNEDSFRPLQTAGLQGNSLSYRNSRIEELKEISGN 376
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
D++ G + + A+A + ++++G ++++ + ++ L+ Q D+
Sbjct: 377 RDLTQGGTTGGVTA--ASAIAALQEAGSKLSRDMLKSAYRAFAKQCYLIIELMRQFYDEQ 434
Query: 335 RMVRLRD-----QWVSF 346
R+ R+ ++V F
Sbjct: 435 RVFRITGQRGESEFVPF 451
>gi|295102644|emb|CBL00189.1| hypothetical protein FP2_29200 [Faecalibacterium prausnitzii L2-6]
Length = 588
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 75/202 (37%), Gaps = 5/202 (2%)
Query: 143 VIMAGGTGKDNILCNEEWNE--LPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQT 200
V++ + ++ PF G + E Q +
Sbjct: 240 VVLYASENDPALAERGFYDHGRYPFVFDALFMEEDSPAGFGYIDVMKECQTAIDKMNHAM 299
Query: 201 LDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSM 260
+N+ ++ + ++ + + ++ E + + I V ++ S + + + S S
Sbjct: 300 DENVLLSSRQRYVLSDTAGVNEEELTDLSRD-IIHVVGRLNDDSFRPLQTAGLQGNSLSY 358
Query: 261 LHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILF 320
+ +EL + +G D++ G A+A + ++++G ++++ +
Sbjct: 359 RNSRIEELKEISGNRDMTQG--GTAGGVTAASAIAALQEAGSKLSRDMLKSAYRAFAKEC 416
Query: 321 RGLLRLIIQHQDKVRMVRLRDQ 342
++ L+ Q D+ R+ R+ +
Sbjct: 417 CLIIELMRQFYDEERIFRITGK 438
>gi|257438498|ref|ZP_05614253.1| hypothetical protein FAEPRAA2165_01042 [Faecalibacterium
prausnitzii A2-165]
gi|257199077|gb|EEU97361.1| hypothetical protein FAEPRAA2165_01042 [Faecalibacterium
prausnitzii A2-165]
Length = 578
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 72/188 (38%), Gaps = 8/188 (4%)
Query: 164 PFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPE 223
PF G + E Q + +N+ ++ + ++ + + ++ E
Sbjct: 264 PFVFDPLFMEEDSPAGFGYIDVMKECQTAIDRMNHAMDENVLLASKQRYVLSDTAGVNEE 323
Query: 224 SVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSP 283
+ + + VA + S + + + S S + +EL + +G D++ G
Sbjct: 324 ELADLSRD-IVHVAGRLGDESFRPLQTAGLQGNSLSYRNSRIEELKEISGNRDMTQG--G 380
Query: 284 EILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-- 341
A+A + ++++G ++++ + ++ L+ Q D+ R+ R+
Sbjct: 381 TAGGVTAASAIAALQEAGSKLSRDMLKSAYRAFARECYLIIDLMRQFYDEERVFRVIGPA 440
Query: 342 ---QWVSF 346
++V F
Sbjct: 441 GGREFVPF 448
>gi|332142316|ref|YP_004428054.1| hypothetical genomic island protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552338|gb|AEA99056.1| hypothetical genomic island protein [Alteromonas macleodii str.
'Deep ecotype']
Length = 700
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/370 (13%), Positives = 108/370 (29%), Gaps = 55/370 (14%)
Query: 32 HDLRIRR-KYSQGKVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMG--- 85
+D+R+ + +G++ +D +P + PD+ + K V +++ +
Sbjct: 133 YDVRLNHDEVIEGEIAIDTENPIAVIPDPDATSYDPKKWSEVFITRWMSPQQIGEQYGED 192
Query: 86 -------------YDRESINNLPIISSQNIE------------------------NTWKF 108
Y R+SI + E +
Sbjct: 193 KRTEVINRAAGAHYGRDSIELSKHTFGSDEETAADTNSIADGATVRNVRVVERQYYKTRI 252
Query: 109 PKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVI-------MAGGTGKDNILCNEEWN 161
+ ++ E + E + + +I T +L ++
Sbjct: 253 IQEFIEPRSGETRKIPEQWTPEHIENVRQTFGLEIIKRKKRSVRWTITADSVVLHDDWSP 312
Query: 162 ELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIID 221
FT + L +II Q+ Q L + +V EGS+ +
Sbjct: 313 YRTFTVVPYFPIYRRGKPIGLVRNIISPQEFLNKTRSQELHIINTTANSGWLVPEGSLTN 372
Query: 222 PESVLNPQFGKPI--RVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISS 279
+ G + I + I P+ + ++ + +G++D
Sbjct: 373 MSPEELAEEGAKTGSVITYNPQIGAPEKIKPNPVPTGVDRISTKGAMDIKEISGMNDAIL 432
Query: 280 GFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRL 339
G + + A G Q+++ L ++L +L LI + R+ +
Sbjct: 433 GSENAEVSGI---ALQEKTARGQIQLQVPFSNLEFSRKLLAEKILELIQDFYTQERVFFI 489
Query: 340 RDQWVSFDPR 349
D PR
Sbjct: 490 TDYMEPEQPR 499
>gi|221271428|dbj|BAH15181.1| portal protein [Serratia phage KSP100]
Length = 374
Score = 73.0 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 198 RQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKS 257
R +DN+ N + +G D S+L+ + G + A +
Sbjct: 2 RGYIDNIMSANYGRFRAVKGQ-YDKRSLLDNRPGGVVEENAIGMVDLFPHHPLP---AGV 57
Query: 258 FSMLHYLDQELVDRTGISDISSGFSPEILQNMTA-TATSLIEQSGVGQVELIVRTLAQ-G 315
S+L ++Q RTG++ I G SPE+ +N + ++ + ++ ++ R +AQ
Sbjct: 58 DSILEQIEQAKERRTGVTRIGMGLSPEVFKNDNSFATVDMMMSAAQNRMRMVARNVAQNF 117
Query: 316 LEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDP 348
+ LF + RL+ ++++ + + P
Sbjct: 118 MTQLFLAIYRLLKENENSTLPIEVNGAMKEVMP 150
>gi|325171218|ref|YP_004251190.1| hypothetical protein ViPhICP2p19 [Vibrio phage ICP2]
gi|323512244|gb|ADX87701.1| conserved hypothetical protein [Vibrio phage ICP2]
gi|323512316|gb|ADX87772.1| hypothetical protein TU12-16_00090 [Vibrio phage ICP2_2006_A]
Length = 581
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/345 (11%), Positives = 94/345 (27%), Gaps = 39/345 (11%)
Query: 16 VEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLY 75
VE ++ + +++ D + + P + + +P +VD SP + +
Sbjct: 144 VEYVKETTKDEESGATRD-------TYFGPRAVRIDPKDIVFNPVAVDFAHSPKII-RTV 195
Query: 76 LTRSDLISM--------------GYDRESINNLPIISSQNIENTWKFPKNQ----YSDKA 117
L +L+ M RE L + ++ E F + Y
Sbjct: 196 LNEGELLQMEQDQPENASLASAIARRREFRRGLGTYTREDCEKAVGFSMDGFGNLYDYFQ 255
Query: 118 LEMIEYYELYVTIDYDGDG--IAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPH 175
+E Y G ++ I+ + + + P
Sbjct: 256 SPYVEVLTFYGDYHDTQSGTFKRNMKVTIIDRMFVIEEKENPSWFAQAPIFHCGWRIRQD 315
Query: 176 CFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIR 235
+++ +Q L D P + + P+
Sbjct: 316 NLYAMGPLDNLVGMQYRIDHLENLKADVFDLIAFPPM--------KVKGDVEEFVWGPME 367
Query: 236 VAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATS 295
V + ++ + L+ ++ + G + G TA
Sbjct: 368 QIYINGDGDVEMMAPNTQALQADMQIQILEAKMEEFAGAPREAMGIR--TPGEKTAFEVQ 425
Query: 296 LIEQSGVGQVELIVRTLA-QGLEILFRGLLRLIIQHQDKVRMVRL 339
++ + + + +E + +L + ++ D +R+
Sbjct: 426 QLQNAAGRIFQEKIMNFEVMLMEKVLNAMLEISRRNLDVADTIRV 470
>gi|239787361|emb|CAX83837.1| Head-to-tail joining protein [uncultured bacterium]
Length = 524
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 28/272 (10%)
Query: 75 YLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDG 134
+T S + + ++ S + + +K + ++ Y + +D +G
Sbjct: 183 EMTISAIRERFPKAQLPESMGRKSKDDADARFKVVEAVLPERHG-----YAYHAILDGEG 237
Query: 135 DGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKT 194
G AE L + PF R ++AP G S + K
Sbjct: 238 TGGAET--------------LAEGRFEMSPFINFRWLKAPGEVYGRSPVMKSLPDIKTAN 283
Query: 195 VLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMI 254
++ L N + + LNP K + G+ +
Sbjct: 284 KVVELVLKNATIAVTGIWQADDDGV------LNPANIKLVPGTIIPKAVGSAGL-TPLET 336
Query: 255 EKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTLA 313
F + + +L R + ++ NMTAT + R +
Sbjct: 337 PGRFDISQLMLTDLRQRISHALLADRLGQIDAPNMTATEVLERSAEMARLLGATYGRLQS 396
Query: 314 QGLEILFRGLLRLIIQHQDKVRMVRLRDQWVS 345
+ L L + ++ + + + + +
Sbjct: 397 ELLTPLVMRAVAILKRRGEIPG-LSIDGHQIE 427
>gi|326203482|ref|ZP_08193346.1| hypothetical protein Cpap_1526 [Clostridium papyrosolvens DSM 2782]
gi|325986302|gb|EGD47134.1| hypothetical protein Cpap_1526 [Clostridium papyrosolvens DSM 2782]
Length = 660
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 6/210 (2%)
Query: 142 RVIMAGGTGKDNILCNEEWNEL-----PFTCLRAMRAPHCFIGESLAASIIEIQKIKTVL 196
+IMAG P + P F S+ +I IQ+ L
Sbjct: 292 HIIMAGDNLLHYGEFIYRVGNDGKYGFPLVMQVCVETPGRFWPVSIIERLIPIQRSFNAL 351
Query: 197 LRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEK 256
+ D L + V++ +D + + F + I + I
Sbjct: 352 KNRKKDILNRKAIGNWAVEDDGNVDVDDLEEEGFYPGKIHFYSRGGKPPQEIQNRSSITD 411
Query: 257 SFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGL 316
L E +G+S +S P N AT I++S ++ L +
Sbjct: 412 FDVEEQRLLDEFTTISGVSPFASQSLPPTGSNSGAT-LEKIKESDDTRIGLTAENINIAA 470
Query: 317 EILFRGLLRLIIQHQDKVRMVRLRDQWVSF 346
++ LR+ Q R++R +
Sbjct: 471 IASYKIDLRMYRQFAKTPRLLRHVGKNDEV 500
>gi|83313332|ref|YP_423596.1| hypothetical protein amb4233 [Magnetospirillum magneticum AMB-1]
gi|82948173|dbj|BAE53037.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 545
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 9/206 (4%)
Query: 145 MAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNL 204
+ G D +L +++ PF R ++AP G S + K ++ L N
Sbjct: 252 VLDDDGSDLVLGRGQFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNA 311
Query: 205 YWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
+ + LNP K + G+ F +
Sbjct: 312 TIAVTGIWQADDDGV------LNPANIKLVPGTIIPKAVGSAGLQ-PLTAPGRFDTSQLV 364
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+L R + + S +TAT + R ++ L L
Sbjct: 365 LDDLRGRIRHALMGDKLSQPASPALTATEVLQRADDMARLLGATYGRLQSELLTPLILRA 424
Query: 324 LRLIIQHQDKVRMVRLRDQWVSFDPR 349
+ ++ + + +++ + + R
Sbjct: 425 IHILRRRGEIP-PLQVDGRTIDLQYR 449
>gi|281357154|ref|ZP_06243643.1| hypothetical protein Vvad_PD2246 [Victivallis vadensis ATCC
BAA-548]
gi|281316185|gb|EFB00210.1| hypothetical protein Vvad_PD2246 [Victivallis vadensis ATCC
BAA-548]
Length = 752
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 78/263 (29%), Gaps = 15/263 (5%)
Query: 73 KLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALE----MIEYYELYV 128
++ D + P+ + + + + + + +
Sbjct: 329 VRSMSPVQAAEFYPDSPQV---PLSPEEFEQKLQQAAAEGIAQSEEDAAAVKVRIAGVDG 385
Query: 129 TIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIE 188
D D + V A I C+ GE +A +
Sbjct: 386 VEDIDQLEDLKFYEVY-AVVVRNHCIYCSLSAASRYIYSASYRANIDSIWGEGIADLLHH 444
Query: 189 IQKIKTVLLRQTLDNLYWQNQPQTIVQEGS-IIDPESVLNPQFGKPIRVAAGMDIRSVLG 247
+Q+ L+R +NL PQ I+ + + P L K V+ +
Sbjct: 445 VQRSVNSLMRSRNNNLALAGAPQVIINTDAVRLKPGEPLQITPFKQWFVSGSGYYGAQKP 504
Query: 248 ---IHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFS--PEILQNMTATATSLIEQSGV 302
+ + + L +GI + S G S E TA+ S++ +
Sbjct: 505 FELMQIPDVSDSLSRELEKELVFADRISGIPEYSQGVSKGAENGAAGTASGLSMLLDAAS 564
Query: 303 GQVELIVRTLAQGL-EILFRGLL 324
Q++ + + +GL E L R L
Sbjct: 565 NQIKDPINNIDEGLYEPLIRDLY 587
>gi|241763592|ref|ZP_04761643.1| conserved hypothetical genomic island protein [Acidovorax
delafieldii 2AN]
gi|241367185|gb|EER61539.1| conserved hypothetical genomic island protein [Acidovorax
delafieldii 2AN]
Length = 718
Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/360 (12%), Positives = 104/360 (28%), Gaps = 55/360 (15%)
Query: 32 HDLRIRRKYS-QGKVCVDAVSPDEFLIHPDSV--DIEKSPIVGRKLYLTRSDLISMGYDR 88
+DLR+ + +G++ + + P + + PD+ D +K V +LT ++ S+
Sbjct: 150 YDLRMNFDKNIKGEIDLATLDPRDVIPDPDAKSYDPDKWADVMVTRWLTLDEIESLYGRN 209
Query: 89 ESINNLPIISSQNIENTWKFPKNQYS--------------------------DKALEMIE 122
+ + D+ + E
Sbjct: 210 ARDLAEKSGDESSDWGFQDGETERSKFGGIRFPGQYDAFGAHDDGLKRFRVIDRQRFVFE 269
Query: 123 YYELYVT------IDYDGDGIAELRRVIMAGGTGKDNILCNEEW-----------NELPF 165
+ V + D + + G + W P+
Sbjct: 270 MTDCLVFPEAGNIVVMDTLSQESIDTALKDGAVKARRMHRRVRWVVATYSTTLFDQYSPY 329
Query: 166 TCLRAMRAPHCFI---GESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDP 222
+ F + I Q++ + Q + + V+E S+ +
Sbjct: 330 DHFTVIPYFAYFRRGETRGMVDDAIGPQEVLNKAVSQEVHIINTTANSGWTVEENSLTNM 389
Query: 223 ESVL--NPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
+ + + V + I + ++ + L D T + D G
Sbjct: 390 STEELNDVGAKTGLIVEYKKGSQRPEKIQPNQVPPGIDKLIAMSTKALKDVT-VPDAMRG 448
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLR 340
+ + A + + Q+ + + L +L + LL+LI ++ D RM R+
Sbjct: 449 QEGNAVSGI---AKQADQFASQQQLAVPLDNLTYTRNLLAKRLLKLIQRYYDSYRMFRIT 505
>gi|218782387|ref|YP_002433705.1| hypothetical protein Dalk_4559 [Desulfatibacillum alkenivorans
AK-01]
gi|218763771|gb|ACL06237.1| hypothetical protein Dalk_4559 [Desulfatibacillum alkenivorans
AK-01]
Length = 704
Score = 71.1 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 76/246 (30%), Gaps = 9/246 (3%)
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
+ +F + I Y+ + D + + I G + +
Sbjct: 273 ETQEWEEFDPENIEQLKVNYILKYKTPFEYNTMMDKKVKWLQFI--GDEILYDGDSPMPY 330
Query: 161 NELPFTC--LRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGS 218
+ + + + + Q+ Q L+ L QP T +++G+
Sbjct: 331 DGFSVVTSIANTDPSRRSNNHFGVIRLMKDPQREINKRWSQALNLLNNMVQPGTDIEDGA 390
Query: 219 IIDPESVLNPQF---GKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
+ D + + G I + + + + M + TGI+
Sbjct: 391 VPDIDQYSEARKTPGGVGIVSSGALRDGKIKERSAPQFPSAPMQMEQMSQDIIRKITGIN 450
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVR 335
G + + ++ G+ ++ + + + +F+ ++ +I ++ +
Sbjct: 451 PDLLGQ--DSGRQEPGVVVQTRQRQGLILLQKLFKEHKRVRREIFKRVIAIISKYMPDGQ 508
Query: 336 MVRLRD 341
++R+
Sbjct: 509 ILRILG 514
>gi|169334552|ref|ZP_02861745.1| hypothetical protein ANASTE_00955 [Anaerofustis stercorihominis DSM
17244]
gi|169259269|gb|EDS73235.1| hypothetical protein ANASTE_00955 [Anaerofustis stercorihominis DSM
17244]
Length = 648
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 113/327 (34%), Gaps = 22/327 (6%)
Query: 35 RIRRKYSQGKVCVDAVSPDEFLIHP-DSVDIEKSPIVGRKLYLTRSDLISM------GYD 87
+I +G + + +SP +F + DIE ++ ++ +M GY+
Sbjct: 183 KINVAIKEGGINYEIISPFDFFPSNVYAKDIESLDYAIWYKVMSVKEIENMFNITVEGYE 242
Query: 88 RESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAG 147
+ S+ + YS+ + + E+ + + + R ++
Sbjct: 243 NNVV---SYSKSKTNVGGLGSKGHGYSESSKNIDLSAEVISYFEKPTNRYPKGRYIVCTK 299
Query: 148 GTGKDN-----ILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLD 202
I + ELPF +++ F GES+ +I +Q+ + + +
Sbjct: 300 DNVLHMGDLPYINAEDGERELPFVIQKSL-DYGEFFGESIINRLIPLQRRFNNIKNRKQE 358
Query: 203 NLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLH 262
L Q ++GSI D + V++ + + + + S
Sbjct: 359 YLNRVAIGQITYEKGSI-DEDDVIDMGLAPGAVIPRRQGSEEPSYLRTPALPSTILSDEK 417
Query: 263 YLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRG 322
++ + +G+S++S + A SL++ ++ L + + +
Sbjct: 418 ATEELFITLSGVSEMSRNSYNPK-NVTSGVALSLLQDQDDTRLALNYENMYDTRIKIAKQ 476
Query: 323 LLRLIIQHQDKVRM---VRLRDQWVSF 346
LR++ R+ V ++ Q V
Sbjct: 477 TLRILKNSVTTPRLSKYVDMKGQ-VEV 502
>gi|296537022|ref|ZP_06899017.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262651|gb|EFH09281.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 63/199 (31%), Gaps = 9/199 (4%)
Query: 145 MAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNL 204
+ G+ L + + PF R ++AP G + + ++ L N
Sbjct: 148 VLEHDGRAWPLAEGRFQDSPFIAFRWLKAPGEAYGRGPVMKALPDIRTANKVVELVLKNA 207
Query: 205 YWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
++ +++P +V + A + + +F + +
Sbjct: 208 SIAATGIWQAEDDGVLNPATV-------RLVPGAIIPKAPGSSGLTPLAAPGNFDVSQLV 260
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+L R + ++ P MTAT Q+ R A+ L L
Sbjct: 261 LDDLRGRIRAALLADRLGPPGTAAMTATEVLERSAQTARLLGATYGRLQAELLTPLIGRC 320
Query: 324 LRLIIQHQDKVRMVRLRDQ 342
L ++ + + ++ L +
Sbjct: 321 LSILRRRGEVPPLL-LDGR 338
>gi|23015763|ref|ZP_00055531.1| hypothetical protein Magn03010200 [Magnetospirillum magnetotacticum
MS-1]
Length = 543
Score = 69.5 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 54/191 (28%), Gaps = 8/191 (4%)
Query: 145 MAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNL 204
+ D +L ++ PF R ++AP G S + K ++ L N
Sbjct: 252 VLDDESSDVVLGRGSFSSSPFLNFRWLKAPGEVYGRSPVMKALPDIKTANKVVELVLKNA 311
Query: 205 YWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
+ + LNP K + G+ F +
Sbjct: 312 TIAVTGIWQADDDGV------LNPANIKLVPGTIIPKAVGSAGLQ-PLTAPGRFDTSQLV 364
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTLAQGLEILFRGL 323
+L R + + S ++TAT + R ++ L L
Sbjct: 365 LDDLRGRIRHALMGDKLSQPASPSLTATEVLQRSDDMARLLGATYGRLQSELLTPLIMRA 424
Query: 324 LRLIIQHQDKV 334
+ ++ + +
Sbjct: 425 IHILRRRGEIP 435
>gi|117924319|ref|YP_864936.1| hypothetical protein Mmc1_1012 [Magnetococcus sp. MC-1]
gi|117608075|gb|ABK43530.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
Length = 671
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/338 (12%), Positives = 107/338 (31%), Gaps = 13/338 (3%)
Query: 8 HMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKS 67
L+ V +++ + +G E D + V V + +F+ P + ++
Sbjct: 136 DYLLPGRGVAWVQYRPQIEGSEPGRDGEPVPLITDESVEVVHLHWTDFVHEP-ARHWKEV 194
Query: 68 PIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELY 127
V R++Y+++ LI + L + + + + E ++
Sbjct: 195 TWVARRVYMSKEALIERFGQKGEQVPLAFLP----QGKRNEASMLAAQNRGAVWEIWDRA 250
Query: 128 VTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCL----RAMRAPHCFIGESLA 183
+ Y DG + I+ L P + P + + A
Sbjct: 251 SSSVYWLDGSDKG---ILLDWEPDPLGLEGFFPCPRPLLATRSTDSMIPVPDYLLYQDQA 307
Query: 184 ASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIR 243
+ +I + ++L R + + + + ++
Sbjct: 308 IELDQITERLSLLTRAVKVSGVYNGELGDRIGSLLQSTGNQLIPVDNWALFGERG-GLRG 366
Query: 244 SVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVG 303
+ + +++ + + I+ IS + TATA S+ Q G
Sbjct: 367 QIEYLPLTDVVQAITVLSSVRESIKSVIYEITGISDIVRGVSKASETATAQSIKSQWGGR 426
Query: 304 QVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD 341
+++ + + + LFR + ++++H + ++
Sbjct: 427 RLQERQSQVQRFVRDLFRMVGEIMVEHFQPQTIAKMVG 464
>gi|144899435|emb|CAM76299.1| head-to-tail joining protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 502
Score = 66.8 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 61/215 (28%), Gaps = 9/215 (4%)
Query: 136 GIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTV 195
G + ++ + +L + + PF R ++AP G S + K
Sbjct: 230 GHYDYAAILEDATDDDEALLAEGRFGQSPFINFRWLKAPGEIYGRSPVMKALPDIKTANK 289
Query: 196 LLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIE 255
++ L N + + LNP K I G+
Sbjct: 290 VVELVLKNATIAVTGIWQADDDGV------LNPANIKLIPGTIIPKAVGSAGLQ-PLESP 342
Query: 256 KSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELIVRTLAQ 314
F + + +L R + ++ MTAT R ++
Sbjct: 343 GRFDISQLVLDDLRGRIRHALLADKLGQADNPKMTATEVLERSADMARLLGATYGRLQSE 402
Query: 315 GLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
L L + ++ + + ++ + V R
Sbjct: 403 LLTPLILRAVTILRRRGEIPPLL-VDGHLVELQYR 436
>gi|171914969|ref|ZP_02930439.1| hypothetical protein VspiD_27370 [Verrucomicrobium spinosum DSM
4136]
Length = 711
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 93/305 (30%), Gaps = 21/305 (6%)
Query: 54 EFLIHPDSVDIE--KSPI----------VGRKLYLTRSDLISMGYDRESINNLPIISSQN 101
+ P + D++ + + ++ LT ++ + + + + S
Sbjct: 278 DIAFDPTAPDLDLHHTDFFHSFTKGVLDIAKEYGLTDAETRELYHAAKERSESLKPESAR 337
Query: 102 IENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL------ 155
E+ P + ++ + + + D G + + M + L
Sbjct: 338 SESAPADPDQDDPNGSIPNLPVRLIEGFMRVDALGKGQASNIYMVFAPQCEMCLKLDYLG 397
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+LP R P +G ++Q L + + + P T
Sbjct: 398 NITPKGKLPVHAHTINRLPWRIVGRGFFERFDKVQTFVDDLFNRINWHDRKSSDPITGFD 457
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHS---VPMIEKSFSMLHYLDQELVDRT 272
+ + + + F + D + I + +++ ML + Q + RT
Sbjct: 458 KSKLAQEDEEEDEPFNSEKPLNLKPDSKLDEAIQFKALPDLNDRTKEMLQMMVQMVQLRT 517
Query: 273 GISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQD 332
GI+ + G + + TAT + ++ + L + L L+ + D
Sbjct: 518 GITAANQGDVAGLPEASTATGIKQLMSRAAVLLKSPIDQLKRSFTCDLEYSLLLLYTNLD 577
Query: 333 KVRMV 337
+
Sbjct: 578 EDETF 582
>gi|209966578|ref|YP_002299493.1| hypothetical protein RC1_3320 [Rhodospirillum centenum SW]
gi|209960044|gb|ACJ00681.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 521
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 10/190 (5%)
Query: 130 IDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEI 189
+ D G A V + +L + E PF R M+AP G S +
Sbjct: 232 VLPDPGGGACRWAVALEDD--PPVLLAEGRFAEPPFIAFRWMKAPGEVYGRSPVMKALPD 289
Query: 190 QKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIH 249
+ ++ L N + + LNP + + A G+
Sbjct: 290 IRTANKVVELVLKNASVAVTGIWQADDDGV------LNPGTIRLVPGAIIPKAVGSAGL- 342
Query: 250 SVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT-SLIEQSGVGQVELI 308
+ F + + +L + ++ P MTAT +
Sbjct: 343 TPLASPGRFDVSQLVLDDLRAHIRHALLADRLGPVQGPRMTATEVLERSAEMARMLGATY 402
Query: 309 VRTLAQGLEI 318
R ++ L
Sbjct: 403 GRLQSELLVP 412
>gi|291334833|gb|ADD94473.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041]
Length = 110
Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 10 LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVD--IEKS 67
L+ D +V+ + E ++ + G + ++ V P+EF I ++ +E +
Sbjct: 38 LLSDPNVQREIIEDSVEETEFGLNVEFKVIEKMGSIRIEPVPPEEFGIARNARSPYVEDT 97
Query: 68 PIVGRKLYLT 77
+ +
Sbjct: 98 NFCYHRTLKS 107
>gi|75760981|ref|ZP_00740986.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491524|gb|EAO54735.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 304
Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 9/197 (4%)
Query: 42 QGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISM-GYDRESINNLPIISSQ 100
G++ P I P + E+ + + + G D + N+ ++
Sbjct: 116 TGEIRCRICDPLTVYIDPAAEMDEEIRWIVERKPRDIDYIQERYGKDVAADENVGFAAAF 175
Query: 101 NIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEW 160
++ F + M++ + +V +AGG D +E
Sbjct: 176 DVTPQNGFNSTSKKRPNMAMVDEMWVKPC-----GKHPNGLKVTIAGGQLLDI---DENA 227
Query: 161 NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSII 220
++PF + P E+ ++ IQ+ ++ + +V GS +
Sbjct: 228 GDIPFFIFGDIPIPGSVKAEAFIKDMLPIQREINIMRSMFATHARKMGNSMWLVPMGSSV 287
Query: 221 DPESVLNPQFGKPIRVA 237
D + + N + G I
Sbjct: 288 DEDEITNEEGGLFIITN 304
>gi|145642444|ref|ZP_01797998.1| Haemophilus-specific protein, uncharacterized [Haemophilus
influenzae R3021]
gi|145272864|gb|EDK12756.1| Haemophilus-specific protein, uncharacterized [Haemophilus
influenzae 22.4-21]
Length = 308
Score = 59.9 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 48/149 (32%), Gaps = 20/149 (13%)
Query: 1 MALNYFIHM---LIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLI 57
+ L+Y + +++ V+V+E + I ++ V P +F+
Sbjct: 151 LCLHYAAVLGTGILRAPVVDVVESKAWKQDSLGNWVGEI---VNKTIPAARLVLPWDFVP 207
Query: 58 HPDSVDIEKSPIVGRKLYLTRSDLISM----GYDRESINNL----------PIISSQNIE 103
+ ++ V + ++T+ L ++ Y +ES+ L
Sbjct: 208 DMTAPTLKDCQFVFERSHVTKKQLQALAKNPYYLKESVLELCELDGGDTRTASNDMDGYV 267
Query: 104 NTWKFPKNQYSDKALEMIEYYELYVTIDY 132
+T + + E + + I
Sbjct: 268 DTLRTLSGLETQSKDNRYELWTYHGGIPL 296
>gi|169795385|ref|YP_001713178.1| putative phage related protein [Acinetobacter baumannii AYE]
gi|169148312|emb|CAM86177.1| conserved hypothetical protein; putative phage related protein
[Acinetobacter baumannii AYE]
Length = 547
Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 12/239 (5%)
Query: 95 PIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMA---GGTGK 151
+ + D ++++ E T GD + + A +
Sbjct: 189 NEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIKGDRQLMPKEMPFASYHVEVDE 248
Query: 152 DNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQ 211
IL +NE PF R + PH G + + K L+R TL +
Sbjct: 249 KIILRETGYNEFPFVIPRFRKIPHSVYGTGQVSIALPDAKTANKLMRDTLRSAEISTLGM 308
Query: 212 TIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDR 271
+ +P + + GK I V ++ + + + L ++
Sbjct: 309 YAGVDDGTFNPRT-VRLGGGKIIVVNDVNSLKRIDDGKGYQVGVDLLAHLQGAIRKK--- 364
Query: 272 TGISDISSGFSPEILQNMTATATSLIEQSGVGQVE-LIVRTLAQGLEILFRGLLRLIIQ 329
++ P MTAT + Q+ L R A+ L L L +
Sbjct: 365 ----MMADQLQPADGPAMTATEVHVRVDLIRQQLGPLYGRWQAELLTPLLERTFGLAYR 419
>gi|317009831|gb|ADU80411.1| mosaic CUP1551/CUP0957-like protein [Helicobacter pylori India7]
Length = 602
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/306 (10%), Positives = 96/306 (31%), Gaps = 26/306 (8%)
Query: 40 YSQGKVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMGYDRESINNLPII 97
+ ++ + A+ P+ F+I S D + + L +T + + + +D I N +
Sbjct: 132 ENNVEIDIKALKPESFVIDYFSTDKNALDARRFHKMLEITEQEALLL-FDESVIINYSNV 190
Query: 98 SSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNI-LC 156
+ + I + E + + E R + G L
Sbjct: 191 NHERIAS------------------VIESWYKEFNEETKSYEWNRYLWNRSAGIYKSELK 232
Query: 157 NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQE 216
+ PF + L I +Q + + + +E
Sbjct: 233 PFKNGACPFIISKLYTDELNNYY-GLFRDIKPMQDFINYAENRM---GNMMGSFKAMFEE 288
Query: 217 GSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISD 276
+++D + + I + ++ +Q+ ++
Sbjct: 289 DAVVDVAEFVETMSLDNAIAKVRPNALKDHKIQFMNNQADLSALSAKAEQKRQLLRLLAG 348
Query: 277 ISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRM 336
++ + + A + ++SG+ ++ ++ ++F+ + I ++ K ++
Sbjct: 349 LNDESLGIAVNRQSGVAIAQRKESGLMGLQTFLKATDDMDRLVFKLAISFICEYFTKEQV 408
Query: 337 VRLRDQ 342
++ D+
Sbjct: 409 FKIVDR 414
>gi|316933862|ref|YP_004108844.1| hypothetical protein Rpdx1_2520 [Rhodopseudomonas palustris DX-1]
gi|315601576|gb|ADU44111.1| hypothetical protein Rpdx1_2520 [Rhodopseudomonas palustris DX-1]
Length = 770
Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/313 (12%), Positives = 99/313 (31%), Gaps = 12/313 (3%)
Query: 33 DLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESIN 92
D + + Q KVC++AV +FL + D + VG++ +LT+ ++ + S +
Sbjct: 159 DEKTDKAKVQEKVCLEAVHRRDFLHD-LARDWSEVDWVGKRSWLTKLEMRKR-FKPVSGD 216
Query: 93 NLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKD 152
+ + + KA +E++ +AE +++
Sbjct: 217 AYQQAAYAVRQQQGDAEADDGKAKAG----VWEIWCKSRNKVVWVAEGCDLVLDEDEPHL 272
Query: 153 NILCNEEWNELPFTCLRA---MRAPHCFIGESLAASIIEIQKIKTVLLRQ-TLDNLYWQN 208
+ + L+ + P + I E+ + L + + Y
Sbjct: 273 QLEGFFPCPRPAYGTLQPGSLIPVPDYAQYKDQLEEINELTGRISALCQAVRVRGFYPAG 332
Query: 209 QPQT--IVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQ 266
+ + + + G +++ + ++ ++ Q
Sbjct: 333 AGDLGDAIDTAVNSVDDGQILVPVSNWSLLGNGSPKDTIVWLPLDQVVSTIKELVGMRRQ 392
Query: 267 ELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRL 326
+ D I+ +S + + T A L Q G ++ L + L + +
Sbjct: 393 LIDDVYQITGLSDIMRGSTVASETLGAQKLKSQYGSVRIRDKQEELVRFARDLTAIVAEI 452
Query: 327 IIQHQDKVRMVRL 339
++ ++ +
Sbjct: 453 AAENFAPQTLLDM 465
>gi|308061501|gb|ADO03389.1| mosaic CUP1551/CUP0957-like protein [Helicobacter pylori Cuz20]
Length = 601
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/310 (9%), Positives = 88/310 (28%), Gaps = 32/310 (10%)
Query: 39 KYSQGKVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMGYDRESINNLPI 96
K ++ + A+ P+ F+I S D + K+ + + I N
Sbjct: 131 KEKNVEIEIKAIKPESFIIDYFSTDKNALDARR-FHKMLEVSEQEALLLFGDSVIINYSF 189
Query: 97 ISSQN----IENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKD 152
++ + IE+ +K + + +
Sbjct: 190 VNHERIASVIESWYKEFNEETKSYEWNRYLWNRSAGIYKAEK------------------ 231
Query: 153 NILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQT 212
+ PF + L I +Q + +
Sbjct: 232 ---KPFKNGVCPFVVSKLYTDELNNYY-GLFRDIKPMQDFINYAENRM---GNMMGSFKA 284
Query: 213 IVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRT 272
+ +E +++D + + I + ++ +Q+
Sbjct: 285 MFEEDAVVDVAEFVETMSLDNAIAKVRPNALKDHKIQFMNNQADLSALSQKAEQKRQLLR 344
Query: 273 GISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQD 332
++ ++ + + A + +SG+ ++ ++ + ++F+ + I +
Sbjct: 345 LLAGLNDESLGMAVNRQSGVAIAQRRESGLMGLQTFLKATDEMDRLVFKLAVSFICDYFT 404
Query: 333 KVRMVRLRDQ 342
K ++ ++ D+
Sbjct: 405 KEQVFKIVDR 414
>gi|152982725|ref|YP_001353895.1| hypothetical protein mma_2205 [Janthinobacterium sp. Marseille]
gi|151282802|gb|ABR91212.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 685
Score = 56.1 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/328 (11%), Positives = 97/328 (29%), Gaps = 34/328 (10%)
Query: 12 KDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVG 71
+ + L+ S + E + + + V D+F I + ++ +
Sbjct: 81 AEPQDQELQESEADQYEEIAWEQTV----------CERVQWDDFRILGAAKTWDEVCAIA 130
Query: 72 RKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTID 131
K TR D I + ++ + + + + E+ + K E+ E +
Sbjct: 131 FKHRFTREDCIEK-FGKD-VGKAITLDNVDDEDVKQSDTTADLFKTAEIWEIW------- 181
Query: 132 YDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLR----AMRAPHCFIGESLAASII 187
+ + + K + ++ F + A+ I +L
Sbjct: 182 ----NKDDKEVIWICKTYSKPCKIQDDPLQLSGFFPIPRPLYAIENDQSLIPAALYTQYE 237
Query: 188 EIQKIKTVLLRQTLDNLYWQNQPQTIVQEG------SIIDPESVLNPQFGKPIRVAAGMD 241
+ K + ++ L + + I + ++ L P
Sbjct: 238 QQAKELNRI-SIRINKLIEALKVRGIYDSTLSELSELMKAADNELIPAQNVAAIAERAGL 296
Query: 242 IRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSG 301
+++ + + + DQ I+ I+ T A + Q G
Sbjct: 297 DKAIFMMPIETIAAVIKYLYEQRDQTKQVIYEITGIADIMRGATDARETMGAQQIKTQWG 356
Query: 302 VGQVELIVRTLAQGLEILFRGLLRLIIQ 329
+++ + R + + + L R +I +
Sbjct: 357 TQRLQRMQREVQRYIRDLIRLKAEIISE 384
>gi|317013629|gb|ADU81065.1| mosaic CUP1551/CUP0957-like protein [Helicobacter pylori
Gambia94/24]
Length = 603
Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/312 (9%), Positives = 94/312 (30%), Gaps = 32/312 (10%)
Query: 39 KYSQGKVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMGYDRESINNLPI 96
K ++ + A+ P+ F+I S D + + L +T + + + + + N
Sbjct: 131 KEKNVEIDIKALKPESFVIDYFSTDKNALDARRFHKMLEITEQEALLL-FGESVMVNYSS 189
Query: 97 ISSQNI----ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKD 152
+ + I E+ +K + +
Sbjct: 190 ANHERIASVIESWYKEYNQNSQSYEWNRYLWSRSAGIYKSE------------------- 230
Query: 153 NILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQT 212
L + PF + L I +Q + +
Sbjct: 231 --LKPFKSGACPFIVSKLYTDELNNYY-GLFRDIKPMQDFINYAENRM---GNMMGSFKA 284
Query: 213 IVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRT 272
+ +E +++D + + I + ++ +Q+
Sbjct: 285 MFEEDAVVDVAEFVETMSLDNAIAKVRPNALKDHKIQFMNNQADLSALSQKAEQKRQLLR 344
Query: 273 GISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQD 332
++ ++ + + A + ++SG+ ++ ++ + ++F+ + I ++
Sbjct: 345 LLAGLNDESLGMAVNRQSGVAIAQRKESGLMGLQTFLKATDEMDRLIFKLAVSFICEYFT 404
Query: 333 KVRMVRLRDQWV 344
K ++ ++ D+ V
Sbjct: 405 KEQVFKIVDRKV 416
>gi|15320615|ref|NP_203459.1| virion structural protein [Myxococcus phage Mx8]
gi|15281725|gb|AAK94380.1|AF396866_45 virion structural protein [Myxococcus phage Mx8]
Length = 663
Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/341 (12%), Positives = 108/341 (31%), Gaps = 8/341 (2%)
Query: 11 IKDSDVEVLEHSHREDGG-EKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPI 69
++ +V ++ E G E + ++ + V D + + L P + +
Sbjct: 141 VEWEEVAGVDAILDEATGAELAAAVPPTQRKAYECVETDYLHWQDVLWSP-ARVWHEVRW 199
Query: 70 VGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVT 129
+ + L + + +D + NL + + K+ S + E +E++
Sbjct: 200 LAFRNLLDMREFNAR-FDADGSRNLWASVPKVGKPK--DGKDGQSCHPWDRAEVWEIWDK 256
Query: 130 IDYDGDGIAELRRVIMAGGTGKDNILCNEEWNEL---PFTCLRAMRAPHCFIGESLAASI 186
D E ++ + + +T + + P + + L I
Sbjct: 257 GGRKVDWYVEGYSAVLDTQPDPLGLESFFPCPKPLLANWTTDKVVPRPDFVLAQDLYKEI 316
Query: 187 IEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVL 246
+ T+L R + + ++ L P G V
Sbjct: 317 DLVSTRITLLERAIRVVGVYDKSSGLTIGRLLSEAAQNDLIPVENWLTFADKGGLRGVVD 376
Query: 247 GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVE 306
P++ S+ Y + + ++ ++ TA A + + G +++
Sbjct: 377 WFPLEPVVAALTSLRDYRRELVDALHQVTGMADIMRGASDPRETAMAQGVKAKFGSIRLQ 436
Query: 307 LIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFD 347
+ +A+ + R +I +H D ++ + +FD
Sbjct: 437 RLQDEVARFASDIQRLKAEVIAEHYDVASILAQANAEFTFD 477
>gi|226227231|ref|YP_002761337.1| hypothetical protein GAU_1825 [Gemmatimonas aurantiaca T-27]
gi|226090422|dbj|BAH38867.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 799
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 7/189 (3%)
Query: 156 CNEEWNELPFTCLRAMRAP--HCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTI 213
EE +LP R P G S + + + L+ LY N P T
Sbjct: 378 EREEPLDLPVAQCRFFEDPADQDPYGLSPVEWLAPMDEAVATQTIAWLEYLYRFNHPNTF 437
Query: 214 VQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+ GS+I P LN + G PIR A I + P +S +++ + + +G
Sbjct: 438 LPLGSVIQPGQ-LNIRDGTPIRYNAAAGKLEYESIPTFP--SESTALIDKYEAWMRTLSG 494
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDK 333
+ + + G + +++ I + + + +V + L R L+LI H
Sbjct: 495 LENAARGVADPSVKS--GIHAERIIEQALVALTQVVSNVQDFLLRRGRIRLQLIATHYTA 552
Query: 334 VRMVRLRDQ 342
R++R+
Sbjct: 553 PRLLRINGD 561
>gi|291336985|gb|ADD96509.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C235]
Length = 694
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/369 (12%), Positives = 87/369 (23%), Gaps = 64/369 (17%)
Query: 12 KDSDVEVLEHSHREDGGEKVHDLRIR------RKYSQGKVCVDAVS-----------PDE 54
D V V+ + V D +R RK +G+V V V ++
Sbjct: 186 NDDAVFVMAQNLLATQNYTVSDAEVRALISDLRKKGEGRVTVPMVHKDRPTVVALKVGED 245
Query: 55 FLIHPDSVDIEKSPIVGRKLYLTRSDLIS-------MGYDRESINNLPIISSQ-----NI 102
F D+ DI+K+ + + Y+T + E + +
Sbjct: 246 FFAPADTTDIQKARRLYYRQYMTAEQIQDAVVSQDWDKRWAEEVIESAKGNMTSGNFLEN 305
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIM---------AGGTGKDN 153
Q + E + G+ + +I +
Sbjct: 306 TTNRSKRPGQLDLDTENLYEVVHAFERRVDPKTGVPGIYIIIFSPHLMSDESGEEIVAKH 365
Query: 154 ILCNEEWNELPFTCLRAMRAPHCFIG-ESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQT 212
L N ++PF +R Q+ + +D Y P
Sbjct: 366 ELLNYGHCQMPFVLMRREFLSRRVDDSRGYGEIAHTWQRQIKMEWDGRVDRSYLATMPPL 425
Query: 213 IVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRT 272
+ G P + M S S + + +
Sbjct: 426 MHPFGRAPV--------KWGPGVMVPRMRADDYQYAESPKYDSGSKEIEESIRKTADRYF 477
Query: 273 GISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQD 332
G + + +VR + + +L+L Q
Sbjct: 478 GRPVE-----------------EANVAYAQMRQQNMVRKWLDHWREVTQQVLQLCQQFLP 520
Query: 333 KVRMVRLRD 341
+ R+
Sbjct: 521 EPFYFRVVG 529
>gi|154175505|ref|YP_001408187.1| hypothetical protein CCV52592_0386 [Campylobacter curvus 525.92]
gi|112802353|gb|EAT99697.1| hypothetical protein CCV52592_0386 [Campylobacter curvus 525.92]
Length = 576
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 83/304 (27%), Gaps = 25/304 (8%)
Query: 40 YSQGKVCVDAVSPDEFLIHPDS--VDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPII 97
+ + V + D F I P S D + L+SM ++ +
Sbjct: 138 KKEKAITVSTIPSDMFYIDPYSCEEDASDAKYFI--------KLMSMDFEDAKV------ 183
Query: 98 SSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCN 157
K + + + YE ++ + G T
Sbjct: 184 ---YFGQKANALKLNIISRYRKRVNIYEFWIKEPDSQSQNGYTWNRYIMGDTLVLLRYEK 240
Query: 158 EEW--NELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+ PF + ++ + + + + +
Sbjct: 241 SPFANGMHPFAVCKLKIDDENRWY-GFFRNLKPQIDFINFAENRMAN---MIGSSKILYE 296
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
++ D ++ V + I V + ++ + +S
Sbjct: 297 SDAVDDADTFAKEINIDNAVVRVKNGALADKKIEIVNNQPQISNLSAKVADARATAQRLS 356
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVR 335
++ + ++ +A +G+ ++ + A +++F + LI ++ D +
Sbjct: 357 GLNDETLGLAVNRLSGSAIEQRNNAGIVSLQGFLSASAAMDKMIFLKAIDLITRYFDAEQ 416
Query: 336 MVRL 339
+ R+
Sbjct: 417 VFRI 420
>gi|299534277|ref|ZP_07047626.1| hypothetical protein CTS44_25721 [Comamonas testosteroni S44]
gi|298717735|gb|EFI58743.1| hypothetical protein CTS44_25721 [Comamonas testosteroni S44]
Length = 724
Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/318 (9%), Positives = 77/318 (24%), Gaps = 27/318 (8%)
Query: 52 PDEFLIHPDSVDI--EKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFP 109
P I P + + + + + + +
Sbjct: 156 PLSVYIDPFAQCPVASDMRYCFLTDLIPTEQFKREYPNAKVTDGVEWQGVGDTYKQGWVR 215
Query: 110 KNQYSDKALEMIEYYELYVTIDYDG------------------DGIAELRRVIMAGGTGK 151
+ I + + DG + R+V A TG
Sbjct: 216 DDGIIVAEYYRIVLTSDTLVLMQDGSTAWKSDLSEDAKAVSAKTRPSMRRKVKWAKITGC 275
Query: 152 DNILCNE-EWNELPF--TCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQN 208
D + E + +P + + + + + ++ + + + +
Sbjct: 276 DVLEEAEIPGSWIPVFPVYGQELDVEGQVHRWGVIRNAKDPARMYNFWMTSATEEVAMRP 335
Query: 209 QPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMD----IRSVLGIHSVPMIEKSFSMLHYL 264
+ + +G E + PM + +L
Sbjct: 336 KTPWVGAKGQFEGVEQQWTNANRSSQAYLEYEPVSLNGQLAPPPQRQPMADVPVGVLQMA 395
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLL 324
+ + + + A ++ G V L + ++ R L+
Sbjct: 396 MHARDNLKSTTGLYDASLGAQGNETSGRAILARQKEGDTANYHFVDNLNRAIKHCGRVLV 455
Query: 325 RLIIQHQDKVRMVRLRDQ 342
+I D R++R+R +
Sbjct: 456 EMIPHIYDGERVIRIRGE 473
>gi|307564867|ref|ZP_07627392.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
gi|307346403|gb|EFN91715.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
Length = 658
Score = 53.4 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 81/268 (30%), Gaps = 17/268 (6%)
Query: 90 SINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGT 149
I + N + + + E + + +D + G
Sbjct: 300 KIEEEDFEKEVTLVNAQRMQMAEATGMPPEEVPLVKATWFMD----DYWYFYYLTPFGDI 355
Query: 150 GKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
K+ E P+ +A I S A +I+ Q+ L+ + +
Sbjct: 356 LKEG-ETPFEHGSHPYV-FKAYPFIDGEIH-SFVADVIDQQRYTNRLITLYDWIMRASAK 412
Query: 210 PQTIVQEGSIIDPESVLNP-----QFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
++ E S+ D S+ + +F I + + + +L+
Sbjct: 413 GVLLMPEDSLPDGVSMEDIAESWAEFNGVIVFKPSKSGQIPHQVANNSTNIGITELLNLQ 472
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLL 324
+ D +G++ G +A + Q+ + ++ + + +
Sbjct: 473 LKFFEDISGVNGALQG--KPGYAGTSAAKYNQETQNATMSLLDMLECFSYFVVDGAYKDV 530
Query: 325 RLIIQHQDKVRMVRLRDQ---WVSFDPR 349
+ I Q D R+ + + + +DP+
Sbjct: 531 KNIQQFYDGKRVFNIAGKTSAQIEYDPK 558
>gi|325971684|ref|YP_004247875.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
gi|324026922|gb|ADY13681.1| hypothetical protein SpiBuddy_1857 [Spirochaeta sp. Buddy]
Length = 571
Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/349 (11%), Positives = 108/349 (30%), Gaps = 37/349 (10%)
Query: 5 YFIHMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSV-D 63
Y + L V + V+D G + ++P +F I ++
Sbjct: 145 YPLDKLATKDAVVQGTSAEW------VYD-----DVESGTCVFETIAPWDFWIDKNANGK 193
Query: 64 IEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEY 123
I+ + + +T +D + D+ P +++E ++++ +
Sbjct: 194 IDT---IFIRFTMTSADALDRFKDK-----TPPNILRDVETDAGHNEHEFVLAIYPRKKL 245
Query: 124 YELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLA 183
+ E + +D I+ +++ P + G L
Sbjct: 246 RSEKGKVLI----STEKPFAAVTYYPVEDCIVEESGYDDFPVAVHVFEQDGTSAYGMGLV 301
Query: 184 ASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIR 243
+ K + R L+ + +P + E +
Sbjct: 302 MKYLTELKRLNSMSRDHLETVQKVAKPPMSIPESLKGRFSGDPGARNYMG------NMDA 355
Query: 244 SVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVG 303
I +V I + L++++ + + + +TAT T I+ +
Sbjct: 356 KPEIIQTVQDIGWLSQEITELEEKIGRLFFNDLFNYLMRQD--KVLTATQTQAIKSEELA 413
Query: 304 QVELIVRT-----LAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFD 347
+ I+ T + ++ +FR +++ + ++R+++ + D
Sbjct: 414 LLASILGTTQYMKINPIVKRVFRIMVKGNRLPKPPKELLRIKNALMRID 462
>gi|109948103|ref|YP_665331.1| mosaic CUP1551/CUP0957-like protein [Helicobacter acinonychis str.
Sheeba]
gi|109715324|emb|CAK00332.1| conserved hypothetical mosaic CUP1551/CUP0957-like protein
[Helicobacter acinonychis str. Sheeba]
Length = 600
Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/309 (9%), Positives = 88/309 (28%), Gaps = 30/309 (9%)
Query: 39 KYSQGKVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMGYDRESINNLPI 96
+ ++ + A++P+ F+I S D + + L +T + + + D ++
Sbjct: 131 EEKNIEIGIKALNPESFIIDHFSTDKNALDARRFHKMLEITEQEALLLFGDSVMVDYSNR 190
Query: 97 ISS---QNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDN 153
IE+ +K + +
Sbjct: 191 HHERIASVIESWYKEYDKEKKSYEWNRYL---------------------WSRNAGVYKS 229
Query: 154 ILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTI 213
PF + L I +Q + + +
Sbjct: 230 ERRPFSNGACPFIVAKLYMDECNHYY-GLFRDIKPMQDFINYAENRM---GNMMGSFKAM 285
Query: 214 VQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTG 273
+E +++D + + I + ++ +Q+
Sbjct: 286 FEEDAVVDIAEFVETMSLDNAIAKVRPNALKENKIQFMNNQADLSALSQKAEQKRQLLRL 345
Query: 274 ISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDK 333
++ ++ + + A + +SG+ ++ ++ ++FR + I ++ K
Sbjct: 346 LAGLNDESLGMAVNRQSGVAIAQRRESGLMGLQSFLKATDDMDRLVFRLAVSFICEYFKK 405
Query: 334 VRMVRLRDQ 342
++ ++ D+
Sbjct: 406 EQVFKIVDR 414
>gi|238801662|ref|YP_002922718.1| gp46 [Burkholderia phage BcepIL02]
gi|237688037|gb|ACR15039.1| gp46 [Burkholderia phage BcepIL02]
Length = 775
Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 12/198 (6%)
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
N PFT + R + + + +Q L + L Y + + +++
Sbjct: 343 SPYRHNRYPFTPIWGFRRARDGMPYGVIRFMRGMQDDVNKRLSKAL---YILSANKVMME 399
Query: 216 EGSIIDPES-VLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGI 274
EG++ D E + V + +V + + Q + G+
Sbjct: 400 EGAVDDIEEFRREIARPDSVNVVKNGKLGAVKLDVDRDLAPAHLELASRSIQMIQQVGGV 459
Query: 275 SDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV 334
+D G + + + A ++ G + L + L LI Q+ +
Sbjct: 460 TDEMLGRTTNAVSGV---AIQARQEQGSVATNKLFDNLRLAFQQHGEKELSLIEQYMTEE 516
Query: 335 RMVRLRD-----QWVSFD 347
+ R+ + ++V+ +
Sbjct: 517 KQFRITNSRGNPEYVAVN 534
>gi|298385365|ref|ZP_06994923.1| hypothetical protein HMPREF9007_02030 [Bacteroides sp. 1_1_14]
gi|298261506|gb|EFI04372.1| hypothetical protein HMPREF9007_02030 [Bacteroides sp. 1_1_14]
Length = 656
Score = 49.5 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 80/268 (29%), Gaps = 17/268 (6%)
Query: 90 SINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGT 149
I+ EN + + E + + +D + G
Sbjct: 298 KIDEEDYAQVVLAENEERMRMAKEVGMPEEEVPLIKATWFVD----DYWYFYYLSPFGD- 352
Query: 150 GKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
E P+ +A I S A +I+ Q+ L+ + +
Sbjct: 353 ILREGETPYEHGSHPYV-FKAYPFIDGEIH-SFVADVIDQQRYTNRLITLYDWIMRASAK 410
Query: 210 PQTIVQEGSIIDPESVLNP-----QFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYL 264
++ E S+ D S+ + +F I + + + +L+
Sbjct: 411 GVLMMPEDSLPDGVSIDDIAESWTEFNGVIVYRPSKSGKVPEQVANNSTNIGIAELLNMQ 470
Query: 265 DQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLL 324
+ D +G++ G +A+ + ++ + ++ + + +
Sbjct: 471 LKFFEDISGVTGALQG--KPGYSGESASHYNQQTENATKSLLDLLECFSCFVVDGAYKDV 528
Query: 325 RLIIQHQDKVRMVRLRDQ---WVSFDPR 349
+ + Q D R+ + + + +DP+
Sbjct: 529 KNMQQFYDTKRVFNIAGRSGAQIEYDPK 556
>gi|221633562|ref|YP_002522788.1| phage domain-containing protein [Thermomicrobium roseum DSM 5159]
gi|221156112|gb|ACM05239.1| phage domain protein [Thermomicrobium roseum DSM 5159]
Length = 429
Score = 49.5 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 89/295 (30%), Gaps = 48/295 (16%)
Query: 35 RIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSP---IVGRKLYLTRSDLISMGYDRESI 91
++ ++ + V + P + + + + + V + L + L E++
Sbjct: 106 KVTWDAARRRPRVTPIDPAQLV---AATRPDDAREVVAVAHEYPLEPAAL-------EAV 155
Query: 92 NNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGK 151
L + + + AE R+++AG T
Sbjct: 156 FGL-------------------------RLPRLGPEGWVTVREEWTAERYRLLVAGETVH 190
Query: 152 DNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQ 211
D + +P+ + AP GES A ++++ + L L P
Sbjct: 191 D---DANPYGWIPYVLVPNSPAPGGPWGESDLADLLDVCRELNRRLTVLSRILQVSGNPI 247
Query: 212 TIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDR 271
+++ + + + +L + S + + L Q L D
Sbjct: 248 VVLENVTASEGIRAEEGAVWEL----PEGSRAYLLDMLSGGGVALHLEYVRLLFQVLHDL 303
Query: 272 TGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRL 326
+ + G L A L Q V +VE R+ + L + +L L
Sbjct: 304 AEVPRAAFGDHGRDLSG---AALELELQPLVHKVERKRRSWERALRQRAQRVLDL 355
>gi|269836055|ref|YP_003318283.1| phage portal protein, SPP1 [Sphaerobacter thermophilus DSM 20745]
gi|269785318|gb|ACZ37461.1| phage portal protein, SPP1 [Sphaerobacter thermophilus DSM 20745]
Length = 452
Score = 49.5 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 10/198 (5%)
Query: 134 GDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIK 193
D AE R +AG + +P+ + PH GES A ++++ +
Sbjct: 190 EDWTAERVRFEVAG---VIVRDEPNPYGWIPYVIFPNIAKPHSLWGESDLADLLDVCREL 246
Query: 194 TVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPM 253
+ L P +++ + + G + + +
Sbjct: 247 NRRMTVISRILQVSGNPIVVLEN---VTGSDGIRADEGAVWELPEDSKAYLLDMLS---- 299
Query: 254 IEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLA 313
+ Y++ +++ + +N++ TA + Q V +V+ R
Sbjct: 300 GGGVRLHIDYVELLYRALYDLAETPRSAFGDSGRNLSGTALEVEIQPLVQKVQRKRRVWD 359
Query: 314 QGLEILFRGLLRLIIQHQ 331
R LL L+ +
Sbjct: 360 SVYRRRNRMLLDLMERFG 377
>gi|147668978|ref|YP_001213796.1| phage portal protein, SPP1 [Dehalococcoides sp. BAV1]
gi|146269926|gb|ABQ16918.1| phage portal protein, SPP1 [Dehalococcoides sp. BAV1]
Length = 454
Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 16/199 (8%)
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+ +PF +R P F G S I+E Q+ L Q L P +++
Sbjct: 197 KPNPYGFIPFVIFPNLREPKRFWGVSDLDEIMEPQRELNRALSQLSRILELSGNPIAVLE 256
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
++ + + G + +L + + + + L + L D
Sbjct: 257 N---VEQSEDIAVRPGAVWNL-PEDTRAYLLDLLQGGGVGLHINYVDLLYRTLHDIAEAP 312
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVR 335
+ G S L A L + ++R++A + +LRL+ ++ R
Sbjct: 313 RAAFGGSGRDLSG-VALEIELQPLLQRVWRKRLIRSVA-YRKRSG-MILRLLEKY----R 365
Query: 336 MVRLRD-----QWVSFDPR 349
+ + PR
Sbjct: 366 GLDFNGVDPSISFSPVLPR 384
>gi|160700609|ref|YP_001552284.1| hypothetical protein BA3_0015 [Thalassomonas phage BA3]
gi|157787728|gb|ABV74300.1| hypothetical protein BA3_0015 [Thalassomonas phage BA3]
Length = 711
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/312 (10%), Positives = 81/312 (25%), Gaps = 28/312 (8%)
Query: 57 IHPDS--VDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYS 114
I PD+ D +++ ++ D + + +
Sbjct: 203 IDPDAKKRDRSDMNWCLIDDTMSKEKFKALYPDATAEPVYEDSVADYDTWFTEKSVRVSE 262
Query: 115 DKALEMIEYYELYV------TIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNEL----- 163
E + + +D D + EL ++ + W ++
Sbjct: 263 YFTREPVIREIALLSDGRSFWLDALEDIVDELLEAGISIVRTRKVKTFKTYWRKITGANV 322
Query: 164 -------PFTCLRAMRAPHC-------FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQ 209
P T + + I S+ + Q++ + + +
Sbjct: 323 LEGPVEIPSTTIPVIPVWGKSLIIKKKEIFRSIIRHSKDAQRMANYWDSAATETVALAPK 382
Query: 210 PQTIVQEGSIIDPESVLNPQFGKPIRV-AAGMDIRSVLGIHSVPMIEKSFSMLHYLDQEL 268
I EG++ E K + + G P + L +
Sbjct: 383 APFIGSEGNVEGREDEWEQANTKNFSLLTYIPQYQGDPGPRRQPPAAVPAAELTLGQNSV 442
Query: 269 VDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLII 328
+ + + A ++ G + L + + + + L+ +I
Sbjct: 443 EKIKSTMGMYDASLGAMGNETSGRAIIARQRQGDRGSFAFIDNLTKSIRRVGKILVEMIP 502
Query: 329 QHQDKVRMVRLR 340
D R+VRL+
Sbjct: 503 HIYDTERVVRLK 514
>gi|270307724|ref|YP_003329782.1| phage domain protein [Dehalococcoides sp. VS]
gi|270153616|gb|ACZ61454.1| phage domain protein [Dehalococcoides sp. VS]
Length = 454
Score = 46.4 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 18/181 (9%)
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+ +PF +R P F G S I+E Q+ L Q L P +++
Sbjct: 197 KPNPYGFIPFVIYPNLREPKRFWGVSDLDEIMEPQRELNRALSQLSRILELSGNPIAVLE 256
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
++ + + G + +L + + + + L + L D
Sbjct: 257 N---VEQSEDIAVRPGAVWNL-PEDTRAYLLDLLQGGGVGLHINYVDLLYRTLHDIAEAP 312
Query: 276 DISSGFSPEILQNMTATATS------------LIEQSG-VGQVELIVRTLAQGLEILFRG 322
+ G S L + A LI + + +I+R L + F G
Sbjct: 313 RAAFGGSGRDLSGI-ALEIELQPLLQRVWRKRLIRSAAYRKRSAMILRLLEKYRGQDFSG 371
Query: 323 L 323
+
Sbjct: 372 V 372
>gi|264677592|ref|YP_003277498.1| hypothetical protein CtCNB1_1456 [Comamonas testosteroni CNB-2]
gi|262208104|gb|ACY32202.1| hypothetical protein CtCNB1_1456 [Comamonas testosteroni CNB-2]
Length = 543
Score = 46.4 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 52/186 (27%), Gaps = 14/186 (7%)
Query: 164 PFTCLRAMRAPHCFI-------GESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQE 216
PF R + P + +IQ + L Y + + I ++
Sbjct: 145 PFKHNRFLMVPIWGYRRARDGLAYGAWRGMRDIQDDLNKRRSKAL---YALSVNRIIAEK 201
Query: 217 GSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISD 276
G++ D + + + + R + + + + + Q+
Sbjct: 202 GAVDDWDDLRD----EAARPDGIIIKNPQRELKFDNNMGDFQANVELAAQDAQLIRNAGG 257
Query: 277 ISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRM 336
++ + A + G L + + L I Q + ++
Sbjct: 258 VTDENLGRDTNANSGRAILAKQDQGSLTTSEFFDNLLLAIRQAGQLRLSHIEQFYTEEKV 317
Query: 337 VRLRDQ 342
+R+ +
Sbjct: 318 IRIVGE 323
>gi|237750676|ref|ZP_04581156.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373766|gb|EEO24157.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 556
Score = 46.0 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 30/312 (9%), Positives = 86/312 (27%), Gaps = 33/312 (10%)
Query: 44 KVCVDAVSPDEFLIHPDSVDIE--KSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQN 101
K+ + + + I P S + K+ + D++ + L +
Sbjct: 140 KITIKHIPINALYIDPYSQKEDGSDCKYY-HKV---------LYNDKDDMIELYGKREYD 189
Query: 102 IENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWN 161
I N + E + Y+E +V + R I +
Sbjct: 190 I------INNVGMNAYRERVRYFESFVL----NPKTRKYDRFIWDKTGIMQTDTSIFDLR 239
Query: 162 ELPFTCLR-AMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSII 220
P + + + + F + ++ Q + + + + + ++
Sbjct: 240 HCPIVIRKLYVDSANAFY--GIFRNVKPHQDYVNFAENRMAN---MLGSQKILYEMSAVD 294
Query: 221 DPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSG 280
+ E V S I S+ ++ + +
Sbjct: 295 NAEEFSKHVSLDNAVVGVRDGALSSSKIQFQNHSNDVASLSSKSNEHRQIARMQAGFNDE 354
Query: 281 FSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLR 340
++ + +G+ ++ + + +F L I ++ DK ++ R+
Sbjct: 355 ALGQVTSRASGVVVQQRTNAGLMGIQRFLTASDLFDKSVFSVCLEYITKYFDKAQVFRIV 414
Query: 341 DQ-----WVSFD 347
++ + +
Sbjct: 415 EEDTFENYFEIN 426
>gi|302339294|ref|YP_003804500.1| head-to-tail joining protein [Spirochaeta smaragdinae DSM 11293]
gi|301636479|gb|ADK81906.1| head-to-tail joining protein, putative [Spirochaeta smaragdinae DSM
11293]
Length = 560
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 45/185 (24%), Gaps = 13/185 (7%)
Query: 148 GTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQ 207
G ++ + + LP+ R G + K L R L
Sbjct: 238 EGGSNHKIRERGYERLPYVVWRWSTNSDEVYGRGPGYDALVDVKRLNRLSRDMLKQSQMA 297
Query: 208 NQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQ- 266
P V E G ++ + + + +
Sbjct: 298 VDPPLAVPEKMRGKVNW---VPRGLNYYQNPNEVPVALNPGMQFQVGLDREQHMQQIIEK 354
Query: 267 -ELVDRTGISDISSGFSPEILQNMTATA-TSLIEQSGVGQVELIVRTLAQGLEILFRGLL 324
+ D + + MTAT + +I R ++ L+ +
Sbjct: 355 HFMTDFF-------LMLEQAPKEMTATEVMERQSEKAAVLGTVIGRISSEFLDPIIDITF 407
Query: 325 RLIIQ 329
+ ++
Sbjct: 408 DIAMK 412
>gi|38640357|ref|NP_944280.1| Bcep22gp51 [Burkholderia phage Bcep22]
gi|33860424|gb|AAQ54984.1| Bcep22gp51 [Burkholderia phage Bcep22]
Length = 776
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 92/343 (26%), Gaps = 64/343 (18%)
Query: 63 DIEKSPIVGRKLYL-----------TRSDLISMGYDR------ESINNLPIISSQNIENT 105
D++ + R ++ + L + D + I+ + S E +
Sbjct: 200 DMDDCRYIFRVKWVDLDVMLAIFPERAAQLRAAAVDNFETWGTDDIDGDDAMDSPEYERS 259
Query: 106 WKFPKNQYSDKALEMIEYYELYVTIDY-----------------DGDGIAELRRVIMAGG 148
A + + E + + D + + V
Sbjct: 260 MNSVTAGAVAYARKRVRMIEAWFRMPVRVQRLKGRNSDFRGEVFDPNDERHVLEVESGRA 319
Query: 149 TGKDNILCNEEWNEL-----------PFTC----LRAM---RAPHCFIGESLAASIIEIQ 190
+ + + P+ + R + + + +Q
Sbjct: 320 VLAVSPMMRMHCAIMTTRDLMWAGPSPYRHNRYPFTPIWGFRRARDGMPYGVIRFMRGMQ 379
Query: 191 KIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHS 250
L + L Y + + +++EG++ D + + + +
Sbjct: 380 DDVNKRLSKAL---YILSTNKVLMEEGAVDDIDEFRREAARPDAVMTVKNGKLGAVKMDV 436
Query: 251 -VPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIV 309
+ + Q + G++D G + + + A ++ G +
Sbjct: 437 DRDLAPAHLELASRSIQMIQQVGGVTDEMLGRTTNAVSGV---AIQARQEQGSVATNKLF 493
Query: 310 RTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-----QWVSFD 347
L + L LI Q+ + + R+ + ++V+ +
Sbjct: 494 DNLRLAFQQHGEKELSLIEQYMTEEKQFRITNSRGNPEYVTVN 536
>gi|190573931|ref|YP_001971776.1| hypothetical protein Smlt1958 [Stenotrophomonas maltophilia K279a]
gi|190011853|emb|CAQ45473.1| putative phage protein [Stenotrophomonas maltophilia K279a]
Length = 723
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 9/216 (4%)
Query: 130 IDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEI 189
+ E+ I G P+T R + L + +
Sbjct: 326 YSLSDAVVEEMWCAIFTEGGLLQLKRSPFRHGRFPYTPYWCYRRNRDGMEYGLVRGVRDS 385
Query: 190 QKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVL---NPQFGKPIRVAAGMDIRSVL 246
Q+ + + L + + Q +EG+I + + + +
Sbjct: 386 QEDLNKRMSKLL---WALSTNQLFYEEGAIDEDRIEEVKREIAKPNGVIPLKNNGLDRIK 442
Query: 247 GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVE 306
++ + E +L + D TG++ G A +Q G
Sbjct: 443 VERNLDVAEAQIKLLELDAAHIHDGTGVNRELLGRETNAASGR---AILAKQQEGAVSTA 499
Query: 307 LIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQ 342
+ G+++ L L Q + R R+ +
Sbjct: 500 ELFDNYRLGIQLSGEKQLSLTEQFMTEERQFRIVGE 535
>gi|18071218|ref|NP_542303.1| hypothetical protein PBC5p43 [Sinorhizobium phage PBC5]
gi|17940324|gb|AAL49568.1|AF448724_5 unknown [Sinorhizobium phage PBC5]
Length = 749
Score = 45.3 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 67/226 (29%), Gaps = 18/226 (7%)
Query: 133 DGDGI------AELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASI 186
+GDG + + N PFT + R + + +I
Sbjct: 314 EGDGEIIEKVSMRMYVALFTSAGLLWLSPSPYRHNRYPFTPIWNKRRGRDGMPYGMIRNI 373
Query: 187 IEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVL 246
+IQ + L L + + I+ +G++ D + + +
Sbjct: 374 RDIQSDINKRASKALHIL---SSNKVIMDDGAVEDINELAEEIARPDAIIVKQQGKEFKI 430
Query: 247 GIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVE 306
+ + ++ L G++D + G + + A ++ G
Sbjct: 431 DTD-RELGQWHLELMSRNISMLQQVGGVTDENLGRTTNAVSGK---AIIARQEQGSLATA 486
Query: 307 LIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD-----QWVSFD 347
+ ++ L + Q + + R+ + ++V+ +
Sbjct: 487 GLFDNHRYAQQVRGEKTLANMEQFMSEEKKFRITNKRGTPEYVAVN 532
>gi|264678783|ref|YP_003278690.1| hypothetical protein CtCNB1_2648 [Comamonas testosteroni CNB-2]
gi|262209296|gb|ACY33394.1| hypothetical protein CtCNB1_2648 [Comamonas testosteroni CNB-2]
Length = 747
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 52/186 (27%), Gaps = 14/186 (7%)
Query: 164 PFTCLRAMRAPHCFI-------GESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQE 216
PF R + P + +IQ + L Y + + I ++
Sbjct: 351 PFKHNRFLMVPIWGYRRARDGLAYGAWRGMRDIQDDLNKRRSKAL---YALSVNRIIAEK 407
Query: 217 GSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISD 276
G++ D + + + + R + + + + + Q+
Sbjct: 408 GAVDDWDDLRD----EAARPDGIIIKNPQRELKFDNNMGDFQANVELAAQDAQLIRNAGG 463
Query: 277 ISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRM 336
++ + A + G L + + L I Q + ++
Sbjct: 464 VTDENLGRDTNANSGRAILAKQDQGSLTTSEFFDNLLLAIRQAGQLRLSHIEQFYTEEKV 523
Query: 337 VRLRDQ 342
+R+ +
Sbjct: 524 IRIVGE 529
>gi|57234878|ref|YP_181101.1| phage domain-containing protein [Dehalococcoides ethenogenes 195]
gi|57225326|gb|AAW40383.1| phage domain protein [Dehalococcoides ethenogenes 195]
Length = 303
Score = 43.0 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
+ +PF +R P F G S I+E Q+ L Q L P V
Sbjct: 197 KPNPYGFIPFVIYPNLREPKRFWGVSDLDEIMEPQRELNRALSQLSRILELSGNP-IAVL 255
Query: 216 EGSIIDPESVLNPQFGKPIRVA 237
E + + P
Sbjct: 256 ENVEQSEDIAVRPGGFTATVRF 277
>gi|300361373|ref|ZP_07057550.1| SPP1 family phage portal protein [Lactobacillus gasseri JV-V03]
gi|300353992|gb|EFJ69863.1| SPP1 family phage portal protein [Lactobacillus gasseri JV-V03]
Length = 468
Score = 41.4 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 60/220 (27%), Gaps = 9/220 (4%)
Query: 113 YSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMR 172
Y + + +Y D + D A + D++ +++ P+ + A+
Sbjct: 157 YDNTVNREPLAFVMYEYYDTESDWQARGKIYYANKVYDFDDMKISDDDTVNPYKMVPAVE 216
Query: 173 APHCFIGESLAASIIEIQKIKTVLLRQ------TLDNLYWQNQPQTIVQEGSIIDPESVL 226
+ + + + +L Q DN Y + + +
Sbjct: 217 FYENEERQGVLDPVKTLLNAYDKVLSQKANQNEYFDNAYLALFNVHLKTD---KKTGKPI 273
Query: 227 NPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEIL 286
+ + V + +YL + +S + +
Sbjct: 274 LDLVNNRFLYLPNTTPGTEPKLEFVSKPDNDGMQENYLKRLEDLIYQVSMVPNLNDQAFA 333
Query: 287 QNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRL 326
N + A S + VR + L LFR + +
Sbjct: 334 GNQSGVALQYKLLSLQNKTANQVRKFKKSLRQLFRVIFSV 373
>gi|258517297|ref|YP_003193519.1| hypothetical protein Dtox_4229 [Desulfotomaculum acetoxidans DSM
771]
gi|257781002|gb|ACV64896.1| hypothetical protein Dtox_4229 [Desulfotomaculum acetoxidans DSM
771]
Length = 508
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 77/276 (27%), Gaps = 36/276 (13%)
Query: 103 ENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAEL---------RRVIMAGG---TG 150
E + ++ ++ + + +D + L R + + G
Sbjct: 150 EQVVQVIRDPLNNNLVREYVIQAAHDWLDDQDNAKRSLVSQRISATKRIIQITGDIPQDQ 209
Query: 151 KDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQP 210
+ + W +P + G+S I K +L L + P
Sbjct: 210 AAYMEEDNPWGFIPIVHFKNEGDDTREFGQSDLEPIEPFFKAYHDVLLHALQGSKMHSTP 269
Query: 211 QT--------IVQEGSIIDPESVLNPQFGKPIRVAAGM-----DIRSVLGIHSVPMIEKS 257
+ + + G I + + I I +
Sbjct: 270 RLKFKLKDIAGFLRNNFGVTDPYAFASQGGTISLDGHEFFLFSEDEDAEFIEVKSAIGDA 329
Query: 258 FSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVR---TLAQ 314
+L +L +VD + + + G T ++ S +++ V I R +
Sbjct: 330 TQLLQFLFYCIVDASETPEFAFGVH-------TPSSLSSVKEQMPILVRKIARKREQFTE 382
Query: 315 GLEILFRGLLRL-IIQHQDKVRMVRLRDQWVSFDPR 349
+ L R +L + + K +W +PR
Sbjct: 383 SWQRLARMVLAMTAMAGNKKAGSYATVLEWDEVNPR 418
>gi|150390340|ref|YP_001320389.1| hypothetical protein Amet_2578 [Alkaliphilus metalliredigens QYMF]
gi|149950202|gb|ABR48730.1| hypothetical protein Amet_2578 [Alkaliphilus metalliredigens QYMF]
Length = 498
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 69/228 (30%), Gaps = 28/228 (12%)
Query: 141 RRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQT 200
+ G ++ W +P + G+S I K ++
Sbjct: 189 IEITGDKPEGIESGTFPNTWGFIPIIHFKNEPDETMKFGQSDIEPIEPYIKAYHDVMLHA 248
Query: 201 LDNLYWQNQPQTIV----QEGSIIDPESVLNP----QFGKPIRVAAGM-----DIRSVLG 247
L + P+ + G + + + +P + G I +
Sbjct: 249 LKGSKMHSTPKLKLKLKDVAGFLANNFGIEDPVKFAKEGGNINLDGHEILFFTQDEDAQF 308
Query: 248 IHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVEL 307
I + +L + +VD + + G T +A + +++ V
Sbjct: 309 IEVKSATGDAKQLLKMIFYCIVDISETPEFIFGVH-------TPSALASVKEQMPIMVNK 361
Query: 308 IVR---TLAQGLEILFRGLLRLIIQ---HQDKVRMVRLRDQWVSFDPR 349
I R A+ ++L R +L + Q ++ V L W DPR
Sbjct: 362 IKRKREQFAEQWQLLARMVLAMSSQVRGYKFSDYTVSL--GWDEVDPR 407
>gi|253583086|ref|ZP_04860294.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834978|gb|EES63531.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 517
Score = 41.0 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 19/214 (8%), Positives = 55/214 (25%), Gaps = 9/214 (4%)
Query: 116 KALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPH 175
E + E + + + DN+L + +N P+T R P+
Sbjct: 211 NENEEVTVIECVMPVAETDTFE------WILFDERMDNVLYRKIYNYNPYTIFRFTVMPN 264
Query: 176 CFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIR 235
G L + ++ + +P ++ + L+P G
Sbjct: 265 NVWGRGLGVTCLDYYERLCYCENLRARQSIRIVEPPLLLVGDKRLIDGFDLDP-NGLNWG 323
Query: 236 VAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATS 295
+ + +++ + + Q + ++ +
Sbjct: 324 GDGITGQANAVPMNTTGTLLPLDQDIQRYTQVI-QAIHFNNPMGSVENRTTRGNAEMGYR 382
Query: 296 LIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQ 329
+ + + + L F +++
Sbjct: 383 MQLFN-QKFSDATSNLYDEVLIPTFAKPKQILQD 415
>gi|254240166|ref|ZP_04933488.1| portal protein [Pseudomonas aeruginosa 2192]
gi|126193544|gb|EAZ57607.1| portal protein [Pseudomonas aeruginosa 2192]
Length = 773
Score = 40.6 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 8/230 (3%)
Query: 123 YYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESL 182
I ++ +RR G + P+ R I
Sbjct: 292 IALASGRISPKKVTVSRVRRSYWLGPHCLHDGPSPYTHRHFPYVPFFGFREDATGIPYGY 351
Query: 183 AASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDI 242
+ Q + + + + +G++ ++ L Q +P
Sbjct: 352 VRGMKYAQDSLNSGMSKLRWGMSVT---RVERTKGAVDMTDAQLRRQIARPDADIVLNAE 408
Query: 243 RSVLGIHSVPMIEKSFSMLHYLDQELVD-RTGISDISSGFSPEILQNMTATATSLIEQSG 301
+ +++ +++ Q L D R I +S+ + + TAT+ +Q
Sbjct: 409 HFASNRGARFEVKRDYTLTDQHFQMLQDNRATIERVSNITAGFQGRKGTATSGIQEQQQI 468
Query: 302 VGQVELIVR---TLAQGLEILFRGLLRLIIQHQDKVRM-VRLRDQWVSFD 347
+ I R G ++ LL +I++ + R V + V+ D
Sbjct: 469 EQSNQSIGRIMDNFRAGRTLVGELLLAMIVEDIGQERTEVVIEGDAVTAD 518
>gi|320103517|ref|YP_004179108.1| hypothetical protein Isop_1979 [Isosphaera pallida ATCC 43644]
gi|319750799|gb|ADV62559.1| hypothetical protein Isop_1979 [Isosphaera pallida ATCC 43644]
Length = 454
Score = 40.6 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 44/179 (24%), Gaps = 12/179 (6%)
Query: 157 NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQE 216
+ LPF F L + ++ + Q L + + P
Sbjct: 251 PNPYGRLPFAFAHDELVTRDFWDGGLGDFLADLDREIDREWSQ-LAWIGQFDLP-IGFLR 308
Query: 217 GSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISD 276
+ + P P+ A + + S + L ++ G+
Sbjct: 309 DASPTARLIARPGHFNPLVAARPGEKPDAFYLRSEYDPTRRLDGLERYLFLALELLGVPR 368
Query: 277 ISSGFSPEILQNMTATATSL------IEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQ 329
+ Q + + +L + + +L A L + Q
Sbjct: 369 AAIRLE----QGRSPSGAALVAEHWPLLTRARRRRDLFAVLEADLLATMLHCAGTWYRQ 423
>gi|239835186|ref|ZP_04683512.1| Hypothetical protein OINT_3000019 [Ochrobactrum intermedium LMG
3301]
gi|239821162|gb|EEQ92733.1| Hypothetical protein OINT_3000019 [Ochrobactrum intermedium LMG
3301]
Length = 772
Score = 40.6 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
N+ P T + R + + + +IQ + L Y + + I++
Sbjct: 343 SPYRHNQFPLTPIWGYRRGRNNLPYGIIRRLKDIQVDVNKRASKAL---YILSSNKIIME 399
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
EG+ D ++ + + L + + ++ + +G++
Sbjct: 400 EGATDDLDAFTEEASRPDAVLVVKTGKKVELNAE-RELAQGHLELMSRSIGMIQQASGVT 458
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVRT--LAQGLEILFRGLLRLIIQHQDK 333
D G + + + A ++ G A+ + +L I Q +
Sbjct: 459 DEVLGRTTNAVSGI---AIQRRQEQGSLATAKFFDNLMFAEQVR--GEKVLANIEQFMSE 513
Query: 334 VRMVRLRD-----QWVSFD 347
+ R+ + Q+V +
Sbjct: 514 KKSFRITNTRGTPQYVDIN 532
>gi|291335183|gb|ADD94807.1| hypothetical protein [uncultured phage MedDCM-OCT-S12-C102]
Length = 574
Score = 40.6 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 44/354 (12%), Positives = 90/354 (25%), Gaps = 60/354 (16%)
Query: 22 SHREDGGEKVHDLRIRRKYSQGKVCVDAVSP-DEFLIHPDSVDIEKSPIVGRKLYLTRSD 80
GE + ++ + + + + A+ P E L+ P++ D ++ + R+ Y + ++
Sbjct: 96 KEVAKTGETIFEVP---QVIKNQPSIVALRPYFEVLMPPETQDWHRARAIFRRDYYSVAE 152
Query: 81 LISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGI--- 137
+ + +E + S + +D + I
Sbjct: 153 IEEKA-------TNGGWDEEFVEKIKRTAGKNSSVWDTGLSPVTGDSEKLDDRSNLIEIV 205
Query: 138 -AELRRVIMAGGTGKDNILCNEEWNEL--------------------PFTCLRAMRAPHC 176
A RRV G G + + ++ PF C +
Sbjct: 206 HAYSRRVTENGNPGIYQTVYSPYMHKDERGKECFAQHELVTEAGGTYPFECFTREKTRRS 265
Query: 177 -FIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIR 235
++ + Q Q D + P V + + G I
Sbjct: 266 PIESRGVSEIVKTWQSEYKAQADQVFDRSSFDTLPALKVP----LRYGQRIKIGPGVQIS 321
Query: 236 VAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATS 295
DI + + L Q DR S E
Sbjct: 322 EQRPGDISW---MDTPKRGADLAFQLMDQIQVRTDRYFGRPNSQVAPVET---------- 368
Query: 296 LIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWVSFDPR 349
+ + V + + + + L + D R + PR
Sbjct: 369 ------QLRQQAYVHRWLRHMSTVVNRMWDLTQKFDDDERFATVTGTGKPI-PR 415
>gi|332981152|ref|YP_004462593.1| hypothetical protein Mahau_0568 [Mahella australiensis 50-1 BON]
gi|332698830|gb|AEE95771.1| hypothetical protein Mahau_0568 [Mahella australiensis 50-1 BON]
Length = 503
Score = 40.3 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 25/236 (10%), Positives = 60/236 (25%), Gaps = 18/236 (7%)
Query: 128 VTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASII 187
+ L ++ W +P + G+S +
Sbjct: 183 CIVTQHISKERRLVQITGDMPPDVQPGEEKNPWGFIPIVHFKNEGDETREFGQSDLEPVE 242
Query: 188 EIQKIKTVLLRQTLDNLYWQNQPQTI--------VQEGSIIDPESVLNPQFGKPIRVAAG 239
K ++ + + P+ + + G I +
Sbjct: 243 PFLKAYHDVMLHAMQGSKMHSTPRLKLKLKDVSRFLANNFGITDPADFAAKGGTINLDGH 302
Query: 240 MDIRSVLGIHSVPM-----IEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATAT 294
+ + + I + +L L +VD + + S G +
Sbjct: 303 ELLIFQDEEDAGFIEVNSAIGDAKDLLQLLFYCIVDTSETPEFSFGVHTPSSLSSVKEQM 362
Query: 295 SLIEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKV-RMVRLRDQWVSFDPR 349
++ + ++ + + L R +L + Q + K +W DPR
Sbjct: 363 PILVR----RIARKREHFTEAWQRLARIVLAMTAQAEGKKFSTYATTLEWDDIDPR 414
>gi|56692922|ref|YP_164304.1| portal protein [Pseudomonas phage F116]
gi|48527508|gb|AAT45883.1| portal protein [Pseudomonas phage F116]
Length = 772
Score = 39.9 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 59/229 (25%), Gaps = 7/229 (3%)
Query: 123 YYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESL 182
I ++ +RR G + P+ R I
Sbjct: 292 IALASGRISPKKVTVSRVRRSYWLGPHCLHDGPTPYTHRHFPYVPFFGFREDATGIPYGY 351
Query: 183 AASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDI 242
+ Q + + + +T + I +
Sbjct: 352 VRGMKYAQDSLNSGVSKLRWGMSVARVERTKGAVAMTDAQFRRQIARPDADIVLDENHMA 411
Query: 243 RSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGV 302
+ + L +S+I++GF + TAT+ +Q
Sbjct: 412 KPGARFDVKRDYTLTDQHFQMLQDNRATIERVSNITAGF---QGRKGTATSGIQEQQQIE 468
Query: 303 GQVELIVR---TLAQGLEILFRGLLRLIIQHQDKVRM-VRLRDQWVSFD 347
+ I R G ++ LL +I++ + R V + V+ D
Sbjct: 469 QSNQSIGRIMDNFRAGRTLVGELLLAMIVEDIGQERTEVVIEGDAVTAD 517
>gi|332704584|ref|ZP_08424672.1| hypothetical protein Desaf_3493 [Desulfovibrio africanus str.
Walvis Bay]
gi|332554733|gb|EGJ51777.1| hypothetical protein Desaf_3493 [Desulfovibrio africanus str.
Walvis Bay]
Length = 809
Score = 39.9 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 43 GKVCVDAVSPDEFLIHP-DSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQN 101
G+V V P F ++P D ++ + V ++ D+ + +
Sbjct: 184 GEVRTVVVDPFHFGVYPVDCKKLQDAEGVLHFYPMSVRQARRKWPDQAPLIRPDADLLKE 243
Query: 102 IENTWKFPKNQYSDKA 117
+ +T + + D+
Sbjct: 244 LGDTRRLIGGEGRDQN 259
>gi|297605545|ref|NP_001057333.2| Os06g0264200 [Oryza sativa Japonica Group]
gi|53793155|dbj|BAD54363.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|255676906|dbj|BAF19247.2| Os06g0264200 [Oryza sativa Japonica Group]
Length = 481
Score = 39.5 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 71/274 (25%), Gaps = 28/274 (10%)
Query: 77 TRSDLISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDG 136
T ++L D E++ + + ++ + + + DG
Sbjct: 213 TDAELREFAADMEALLGRGLDDGNDEDSFCMETLGLIEPVDDD-------AGRVKVEADG 265
Query: 137 IAELRRVIMAG---GTGKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIK 193
A + T +L + P AA+ + Q +
Sbjct: 266 DAGMTLAWCHELDTETSSGEMLDIDFDCGSPQAATTPDEKVGS---SGPAAADDDAQLQQ 322
Query: 194 TVL---LRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHS 250
+ L L W P T + + +S + +L
Sbjct: 323 SNLALSLNYEAIIESWGTSPWTDGERPHVKLDDSWPRDYSVRATPCTPYASSHRILH--- 379
Query: 251 VPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVR 310
L D L R + + + A + G+ + R
Sbjct: 380 ---------NLAGTDDLLRRRAAVQGVWMAAAGVFGHGGEEQALTPRLGMDGGREARVSR 430
Query: 311 TLAQGLEILFRGLLRLIIQHQDKVRMVRLRDQWV 344
+ LF +R ++ + + R++ ++V
Sbjct: 431 YREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 464
>gi|300087306|ref|YP_003757828.1| phage portal protein SPP1 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527039|gb|ADJ25507.1| phage portal protein, SPP1 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 423
Score = 39.1 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 53/195 (27%), Gaps = 12/195 (6%)
Query: 158 EEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEG 217
W +P+ + P G S ++ Q L Q L P V E
Sbjct: 187 NPWRFIPYLVFPNLPRPKSSWGMSDLENLTGPQLELERALSQLSRILELSGNP-IAVLEN 245
Query: 218 SIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDI 277
+ + P + +L + + + L + L D +
Sbjct: 246 VEESSDIAVAP---GAVWHLPEEARAYLLDLLQGGGGQLHLDYIDLLFRVLHDLAEVPRA 302
Query: 278 SSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQG--LEILFRGLLRLIIQHQDKVR 335
+ G + + +L + + + L + L L ++ +
Sbjct: 303 AFGGVGRDI-----SGVALELELQPLLHRVWRKRLVRTGVYRRRAEMALALYGRYLGRDF 357
Query: 336 -MVRLRDQWVSFDPR 349
V ++ W PR
Sbjct: 358 NGVDVQVDWAPVLPR 372
>gi|256845624|ref|ZP_05551082.1| predicted protein [Fusobacterium sp. 3_1_36A2]
gi|256719183|gb|EEU32738.1| predicted protein [Fusobacterium sp. 3_1_36A2]
Length = 550
Score = 39.1 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 57/210 (27%), Gaps = 6/210 (2%)
Query: 119 EMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFI 178
E I E V + + + + + +L E N P+T R
Sbjct: 217 EKINIIECVVGVFDEDTSTYKYYHGLFT--EAFEEMLYEGELNYNPYTVFRWKINSSNPW 274
Query: 179 GESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAA 238
G + +++ K L + + P + + + L
Sbjct: 275 GIGIGLENLDLFKELKDLKEKRKKHADKIVSPPLNFYGSTDLINKVSLKA---NAKNYGG 331
Query: 239 GMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISSGFSPEILQNMTATATSLIE 298
G+ + + + ++Q + + +N +AT SL
Sbjct: 332 SGIGGDKYGVEPINIGTNLLPVEKDIEQVKQEIREVFMSQPLGDVSDTKNRSATEMSLRH 391
Query: 299 QSGVGQVELIVRTLA-QGLEILFRGLLRLI 327
+ + + + LE F ++
Sbjct: 392 EMFRKEFSGTYELINTELLEPTFMNAYYIM 421
>gi|313113968|ref|ZP_07799523.1| site-specific recombinase, phage integrase family [Faecalibacterium
cf. prausnitzii KLE1255]
gi|310623670|gb|EFQ07070.1| site-specific recombinase, phage integrase family [Faecalibacterium
cf. prausnitzii KLE1255]
Length = 377
Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 5/99 (5%)
Query: 11 IKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIV 70
+ +DV++ E + G D +I+ ++ V V + + L+ + V
Sbjct: 207 LTWADVDLKEATITVHSGYNFKDKKIKDPKTEAGVRVVNIP--KILVDYLKTQQDDCLYV 264
Query: 71 GRK---LYLTRSDLISMGYDRESINNLPIISSQNIENTW 106
+T ++ + N
Sbjct: 265 LHTVKGHRMTEQAWKTLWSSYMADLNAKYGYHGEESKKR 303
>gi|75760980|ref|ZP_00740985.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491523|gb|EAO54734.1| Phage protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 287
Score = 39.1 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 22/45 (48%)
Query: 297 IEQSGVGQVELIVRTLAQGLEILFRGLLRLIIQHQDKVRMVRLRD 341
+ + ++ + + G++ L + +L L+ +H + RM R+
Sbjct: 1 MVEQENEKLAVSSQNYEHGMKRLLQRVLMLMKKHYTEERMARILG 45
>gi|54302247|ref|YP_132240.1| putative head-tail connector protein [Photobacterium profundum SS9]
gi|46915668|emb|CAG22440.1| hypothetical protein PBPRB0567 [Photobacterium profundum SS9]
Length = 552
Score = 39.1 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 25/270 (9%), Positives = 72/270 (26%), Gaps = 9/270 (3%)
Query: 82 ISMGYDRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELR 141
+ Y + + + + + +Y+ ++ + + +
Sbjct: 172 RKVEYRVSQVVEKFGLDNVSQSIKSAYRSGKYNQLTEIRHLVFDNPDFVPRAFSAVRKPI 231
Query: 142 R-VIMAGGTGKDNILCNEEWNELPFTCLRAMRAPHCFIG-ESLAASIIEIQKIKTVLLRQ 199
+ ++ L ++E PF R + G + K R
Sbjct: 232 CSIWYDPADDRNPFLRRSGFDEFPFVTPRWEVIGNDTYGSFGPGMLALGSIKGLQKDQRD 291
Query: 200 TLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFS 259
+ +P + +P S+L + + ++
Sbjct: 292 KYEAQDKMLKPPMVGPSSLKNNPRSLLP----GAVTFVDNQQGQQGFTPAFQTNFPLNYQ 347
Query: 260 MLHYLD-QELVDRTGISDISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTL-AQGLE 317
+ D + ++D D+ N TAT + ++ + + ++ +GL+
Sbjct: 348 LESIRDTRAIIDSAFFKDLFLAVIDIGKSNTTATEIAARKEEKLLMLGPVLNRFNEEGLD 407
Query: 318 ILFRG-LLRLIIQHQDKVRMVRLRDQWVSF 346
+ + + L V+
Sbjct: 408 PIVSASFYEMNRRGMLPEPPPELDGVDVNI 437
>gi|319956966|ref|YP_004168229.1| oligopeptidase a [Nitratifractor salsuginis DSM 16511]
gi|319419370|gb|ADV46480.1| oligopeptidase A [Nitratifractor salsuginis DSM 16511]
Length = 651
Score = 38.7 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 19/177 (10%)
Query: 8 HMLIKDSDVEVLEHSHREDGGEKVHDLRIRRKYSQGKVCVDA---VSP------------ 52
++L E++ + G DL R GKV +
Sbjct: 155 NLLDATKAYELIIEDPEDVAGIPESDLAAARFEEDGKVQWRFTLQIPSYLAYMTYGPNRQ 214
Query: 53 --DEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLPIISSQNIENTWKFPK 110
+E + E + ++ R L L + +G+D + L +++ F +
Sbjct: 215 LREELYRAYTTRAPENAQVIDRILELRQQKAKLLGFDNYAEYALQTRDARDEWEVTDFLE 274
Query: 111 NQYSDKALEMIEYYELYVTIDYDGDGIAEL--RRVIMAGGTGKDNILCNEEWNELPF 165
+ E + DGI +L V G K ++ +E P+
Sbjct: 275 KLTELSLPQGRAELEELRRFARELDGIEDLASYDVAYYGEKLKKHLYDFDESETKPY 331
>gi|260827316|ref|XP_002608611.1| hypothetical protein BRAFLDRAFT_115635 [Branchiostoma floridae]
gi|229293962|gb|EEN64621.1| hypothetical protein BRAFLDRAFT_115635 [Branchiostoma floridae]
Length = 513
Score = 38.3 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 69/240 (28%), Gaps = 19/240 (7%)
Query: 22 SHREDGGEKVHDLRIRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDL 81
D +DL + G+V +D +S E++ GR R +L
Sbjct: 269 EETRDIVMPTYDLTESTLETMGRVSLDMLSVQGNTGPRWVNKTEQALWRGRDSRRERLNL 328
Query: 82 ISMGY-DRESINNLPIISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAEL 140
+ +G + I+ + K+ + + ++++ ++ DG A
Sbjct: 329 VDLGRKYPDLIDAALTNFFFFRDEEAKY---GPKVQHISFFDFFKYKYQLNIDGTVAAYR 385
Query: 141 RRVIMAGGT----GKDNILCNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVL 196
++AG + + + + P+ R + ++
Sbjct: 386 LPYLLAGDSAVFKHESVYYEHFYSDLEPYVHYIPFR-----------KDLTDLVPKIRWA 434
Query: 197 LRQTLDNLYWQNQPQTIVQEGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEK 256
R D + ++ + + + + + G+ VP +
Sbjct: 435 KRNDDDARQIAENGREYARKNLLANSIFCYYERLFREYASRQVDQPQVREGMEEVPQPTE 494
>gi|308071876|emb|CBW54797.1| putative head-tail connector protein [Pantoea phage LIMElight]
Length = 529
Score = 38.3 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 6/217 (2%)
Query: 100 QNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNILCNEE 159
Q++ ++ + QY E + Y + +G + V
Sbjct: 181 QDLPEDFRLSRLQYRTDPFEDVTLYT---KVTRKHNGARVMYEVTQEVEDYPIGTPSTYP 237
Query: 160 WNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQEGSI 219
P+ L G + L +L + I+ G+
Sbjct: 238 EYLCPYIPLTWNLVTGENYGRGHVEDFAGDFARLSELSESSLLYEVEMMRLINIIDPGAG 297
Query: 220 IDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISDISS 279
ID + ++ GK + + V+ + + + LV + I+ + +
Sbjct: 298 IDLDDFMDADCGKAVAGKSNAAGNGVVAHEGGN--AQKLAAVQNDIANLVQQLSIAFMYT 355
Query: 280 GFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGL 316
G + + + +TA + + L++ L
Sbjct: 356 GNTRDA-ERVTAEEIRANVSEANQTLGGVYANLSEVL 391
>gi|319440825|ref|ZP_07989981.1| hypothetical protein CvarD4_03568 [Corynebacterium variabile DSM
44702]
Length = 542
Score = 36.8 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 59/230 (25%), Gaps = 17/230 (7%)
Query: 114 SDKALEMIEYYELYVTIDYDGDGIAE--------LRRVIMAGGTGKDNILCNEEWNELPF 165
S IEY + D GD L V+ A G I
Sbjct: 209 SRHTPGRIEYTLMAGRDDNLGDTEPLANHPSTVGLAAVVDADGGVATGITRIAAVYIPNV 268
Query: 166 TCLRAMRAPHCFIGES---LAASIIEIQKIKTVLLRQTLDNLYWQNQP-----QTIVQEG 217
+ A R L A + + + L + +G
Sbjct: 269 QPIPAFRRSGQLRNMGRPDLPADTYGLLDMLDEVWTDLKRELRTAKARVIVPEMMLDFKG 328
Query: 218 SIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPM-IEKSFSMLHYLDQELVDRTGISD 276
+ E + + + + +E+ L +E++ R S
Sbjct: 329 AGRGMEFDPEREIYSAVADTPASIENGSPMVVQPQIRVEQYLRACDALVREVLRRASYSP 388
Query: 277 ISSGFSPEILQNMTATATSLIEQSGVGQVELIVRTLAQGLEILFRGLLRL 326
+ G + +TA ++ + + R GL L ++ L
Sbjct: 389 GTFGLNDNTSGAVTAREIEANSRATLQTFKAKARHWKAGLAHLAAAMVEL 438
>gi|269926874|ref|YP_003323497.1| hypothetical protein Tter_1769 [Thermobaculum terrenum ATCC
BAA-798]
gi|269790534|gb|ACZ42675.1| hypothetical protein Tter_1769 [Thermobaculum terrenum ATCC
BAA-798]
Length = 435
Score = 36.8 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 6/140 (4%)
Query: 157 NEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQE 216
+P+ +R P F GES +I + + L + + V E
Sbjct: 193 PNPLGRIPYVIFPNIRRPFSFWGESDLVDLIGPARELNKRMS-VLAWVLEVSGNPIAVLE 251
Query: 217 GSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGISD 276
+ D + G+ + A +L + ++ + L + L D
Sbjct: 252 NAEADG---IRVGPGQLWELPAESKA-YLLDLLQGGGVKLHIEYVDLLYRALHDIAETPR 307
Query: 277 ISSGFSPEILQNMTATATSL 296
+ G S ++ A +
Sbjct: 308 TAFGDSGRVISGA-ALEVEM 326
>gi|259419010|ref|ZP_05742927.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
gi|259345232|gb|EEW57086.1| hypothetical protein SCH4B_4395 [Silicibacter sp. TrichCH4B]
Length = 506
Score = 36.4 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 66/275 (24%), Gaps = 31/275 (11%)
Query: 36 IRRKYSQGKVCVDAVSPDEFLIHPDSVDIEKSPIVGRKLYLTRSDLISMGYDRESINNLP 95
+ R G + +AV + + P + IE R+ +L + D + +
Sbjct: 136 VDRPTLNGAINFEAVPIPQLYVTPGPLGIED---RFRRQRFHYRNLKVLFPDAKFPRAIE 192
Query: 96 IISSQNIENTWKFPKNQYSDKALEMIEYYELYVTIDYDGDGIAELRRVIMAGGTGKDNIL 155
++ + + + +D G + G +
Sbjct: 193 DKIKKSSNALAVVVHGFWRTFEDVENPVWRHEIRVDGKPIG--------LDKDVGSIGAV 244
Query: 156 CNEEWNELPFTCLRAMRAPHCFIGESLAASIIEIQKIKTVLLRQTLDNLYWQNQPQTIVQ 215
R G ++ + + L+R ++ L P
Sbjct: 245 N--------LVVGRFNPYAGSAWGRGPGRKLLPVFRQYDELVRMNMEGLDRTLDPPFTYP 296
Query: 216 EGSIIDPESVLNPQFGKPIRVAAGMDIRSVLGIHSVPMIEKSFSMLHYLDQELVDRTGIS 275
++D L G ++ + + FS +
Sbjct: 297 HDGMLDLSQGLENGVG---YPTMPGTKDALQPVLFGTLDYGFFSEEKLEQKIRDGFYREK 353
Query: 276 DISSGFSPEILQNMTATATSLIEQSGVGQVELIVR 310
+ + T + S QV + R
Sbjct: 354 EQA---------GKTPPSASQYIGQENKQVRRMAR 379
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.116 0.263
Lambda K H
0.267 0.0354 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,541,087,360
Number of Sequences: 14124377
Number of extensions: 48387896
Number of successful extensions: 175407
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 175171
Number of HSP's gapped (non-prelim): 214
length of query: 350
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 210
effective length of database: 2,865,380,850
effective search space: 601729978500
effective search space used: 601729978500
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 81 (36.0 bits)