HHsearch alignment for GI: 254781147 and conserved domain: COG1356
>COG1356 tfx Transcriptional regulator [DNA replication, recombination and repair].
Probab=93.34 E-value=0.042 Score=33.31 Aligned_cols=46 Identities=28% Similarity=0.410 Sum_probs=32.2
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH---HHHHHHHHHCCCH
Q ss_conf 9839949999998634299998875589994489---9999999928999
Q gi|254781147|r 31 KEAKLTQKEIRNRTGFAQSWISELETGKSTINID---NMIILAHTLDTPL 77 (83)
Q Consensus 31 ~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~---~l~~la~al~i~~ 77 (83)
T Consensus 20 RekG~tQ~eIA~~L~TTraNvSaIEkrA-~enIekarnTL~l~~~i~spv 68 (143)
T COG1356 20 REKGLTQSEIARILKTTRANVSAIEKRA-LENIEKARNTLLLWEQINSPV 68 (143)
T ss_pred HHCCCCHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHCCCE
T ss_conf 6405648999999754510179999999-998999988999999846975