HHsearch alignment for GI: 254781147 and conserved domain: COG1395
>COG1395 Predicted transcriptional regulator [Transcription].
Probab=98.34 E-value=1.3e-06 Score=60.06 Aligned_cols=56 Identities=16% Similarity=0.265 Sum_probs=53.7
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 99999999983994999999863429999887558999448999999999289999
Q gi|254781147|r 23 VNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLW 78 (83)
Q Consensus 23 g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~ 78 (83)
T Consensus 127 ge~Lre~Ree~glSlG~lA~~lgVSRktV~~YE~G~~~~sleva~kLeei~g~~iv 182 (313)
T COG1395 127 GEKLREKREEMGLSLGDLATMLGVSRKTVYKYEKGLSDASLEVALKLEEIFGEDIV 182 (313)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 29999999980867878898838468889876247777329999999998562220