HHsearch alignment for GI: 254781147 and conserved domain: COG2390
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].
Probab=95.49 E-value=0.028 Score=34.32 Aligned_cols=60 Identities=25% Similarity=0.238 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----HCCCCCCCHH--------HHHHHHHHHCCC
Q ss_conf 99999999999999983994999999863429999887-----5589994489--------999999992899
Q gi|254781147|r 17 RERMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISEL-----ETGKSTINID--------NMIILAHTLDTP 76 (83)
Q Consensus 17 ~~~~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~i-----E~G~~~~~~~--------~l~~la~al~i~ 76 (83)
T Consensus 9 ~~~~~l~~~~A~lYY~~gltQ~eIA~~LgiSR~~v~rlL~~Ar~~GiV~I~i~~~~~~~~~Le~~L~~~fgL~ 81 (321)
T COG2390 9 MEEERLLARAAWLYYVEGLTQSEIAERLGISRATVSRLLAKAREEGIVKISINSPVEGCLELEQQLKERFGLK 81 (321)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 2689999999999984688799999883988999999999999879389996798765399999999965997