HHsearch alignment for GI: 254781147 and conserved domain: COG4800
>COG4800 Predicted transcriptional regulator with an HTH domain [Transcription].
Probab=97.33 E-value=0.00082 Score=43.47 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999999839949999998634299998875589994489999999992
Q gi|254781147|r 18 ERMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTL 73 (83)
Q Consensus 18 ~~~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al 73 (83)
T Consensus 13 s~E~F~~~l~~~l~Elglt~~eFak~anIP~StLYKil~G-~dpr~~tl~~I~kti 67 (170)
T COG4800 13 SGEDFGSCLQKLLDELGLTPSEFAKRANIPLSTLYKILKG-SDPRYDTLTRIFKTI 67 (170)
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCHHHHHHHHHHH
T ss_conf 4007999999999981999899988709989999999817-996577899999999