HHsearch alignment for GI: 254781147 and conserved domain: PHA01976

>PHA01976 helix-turn-helix protein.
Probab=99.58  E-value=6.3e-15  Score=109.43  Aligned_cols=61  Identities=25%  Similarity=0.320  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHC
Q ss_conf             9999999999983994999999863429999887558999448999999999289999960
Q gi|254781147|r   21 IFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLL   81 (83)
Q Consensus        21 ~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~   81 (83)
T Consensus         2 ~F~~RL~~lR~~~g~sQ~eLA~~lGVs~~~is~wE~g~~~P~~d~L~~la~~~~VS~D~Ll   62 (67)
T PHA01976          2 SFAIQLIKARNARAWSAPELSRRAGVRHSLIYDFEADKRLPNLKTLLRLADALGVTLDWLC   62 (67)
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf             7899999999986999999999949989999999878989998999999999797899992