HHsearch alignment for GI: 254781147 and conserved domain: PRK05572
>PRK05572 sporulation sigma factor SigF; Validated.
Probab=90.97 E-value=0.28 Score=28.46 Aligned_cols=33 Identities=30% Similarity=0.298 Sum_probs=28.5
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999983994999999863429999887558
Q gi|254781147|r 25 NFRNIRKEAKLTQKEIRNRTGFAQSWISELETG 57 (83)
Q Consensus 25 ~ir~~R~~~gltq~ela~~~gis~~~is~iE~G 57 (83)
T Consensus 208 ~Vi~~ry~~~~tl~EIa~~lgiS~eRVrQI~~~ 240 (251)
T PRK05572 208 LIIYLRYFKDKTQSEVAKRLGISQVQVSRLEKK 240 (251)
T ss_pred HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 999998178988999999979799999999999