HHsearch alignment for GI: 254781147 and conserved domain: PRK05572

>PRK05572 sporulation sigma factor SigF; Validated.
Probab=90.97  E-value=0.28  Score=28.46  Aligned_cols=33  Identities=30%  Similarity=0.298  Sum_probs=28.5

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999983994999999863429999887558
Q gi|254781147|r   25 NFRNIRKEAKLTQKEIRNRTGFAQSWISELETG   57 (83)
Q Consensus        25 ~ir~~R~~~gltq~ela~~~gis~~~is~iE~G   57 (83)
T Consensus       208 ~Vi~~ry~~~~tl~EIa~~lgiS~eRVrQI~~~  240 (251)
T PRK05572        208 LIIYLRYFKDKTQSEVAKRLGISQVQVSRLEKK  240 (251)
T ss_pred             HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999998178988999999979799999999999