HHsearch alignment for GI: 254781147 and conserved domain: PRK11303
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=96.25 E-value=0.0083 Score=37.51 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCC---CCHHH---HHHHHHHHCCCH
Q ss_conf 94999999863429999887558999---44899---999999928999
Q gi|254781147|r 35 LTQKEIRNRTGFAQSWISELETGKST---INIDN---MIILAHTLDTPL 77 (83)
Q Consensus 35 ltq~ela~~~gis~~~is~iE~G~~~---~~~~~---l~~la~al~i~~ 77 (83)
T Consensus 1 vTikDVA~~AGVS~aTVSrvLNg~~~~~~Vs~~Tr~rV~~aa~eLgY~P 49 (330)
T PRK11303 1 MKLDEIARLAGVSRTTASYVINGKAKQYRISDKTVEKVMAVVREHNYHP 49 (330)
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 9789999997979989988838999888769999999999999968994