HHsearch alignment for GI: 254781147 and conserved domain: PRK11303

>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=96.25  E-value=0.0083  Score=37.51  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=34.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCC---CCHHH---HHHHHHHHCCCH
Q ss_conf             94999999863429999887558999---44899---999999928999
Q gi|254781147|r   35 LTQKEIRNRTGFAQSWISELETGKST---INIDN---MIILAHTLDTPL   77 (83)
Q Consensus        35 ltq~ela~~~gis~~~is~iE~G~~~---~~~~~---l~~la~al~i~~   77 (83)
T Consensus         1 vTikDVA~~AGVS~aTVSrvLNg~~~~~~Vs~~Tr~rV~~aa~eLgY~P   49 (330)
T PRK11303          1 MKLDEIARLAGVSRTTASYVINGKAKQYRISDKTVEKVMAVVREHNYHP   49 (330)
T ss_pred             CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             9789999997979989988838999888769999999999999968994