HHsearch alignment for GI: 254781147 and conserved domain: PRK12427
>PRK12427 flagellar biosynthesis sigma factor; Provisional.
Probab=91.55 E-value=0.22 Score=29.04 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=28.2
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999983994999999863429999887558
Q gi|254781147|r 26 FRNIRKEAKLTQKEIRNRTGFAQSWISELETG 57 (83)
Q Consensus 26 ir~~R~~~gltq~ela~~~gis~~~is~iE~G 57 (83)
T Consensus 189 Vi~l~y~e~ltlkEIa~~LgvS~~RVsQi~~k 220 (229)
T PRK12427 189 ILHLYYQQELSMKEIAQVLDLTEARICQLNKK 220 (229)
T ss_pred HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99998058998999999979889999999999