HHsearch alignment for GI: 254781147 and conserved domain: smart00354

>smart00354 HTH_LACI helix_turn _helix lactose operon repressor.

Probab=95.87  E-value=0.016  Score=35.80  Aligned_cols=42  Identities=14%  Similarity=0.249  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HHHHHHHHCCCH
Q ss_conf             499999986342999988755899944899---999999928999
Q gi|254781147|r   36 TQKEIRNRTGFAQSWISELETGKSTINIDN---MIILAHTLDTPL   77 (83)
Q Consensus        36 tq~ela~~~gis~~~is~iE~G~~~~~~~~---l~~la~al~i~~   77 (83)
T Consensus         2 Ti~dvA~~aGVS~sTVSr~ln~~~~Vs~~tr~rV~~~a~~lgY~p   46 (70)
T smart00354        2 TIKDVARLAGVSKATVSRVLNGNGRVSEETREKVLAAMEELGYIP   46 (70)
T ss_pred             CHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             899999998959999999977999899999999999999978998