HHsearch results for GI: 254781147 and protein with PDBid: 1ic8_A

>1ic8_A Hepatocyte nuclear factor 1-alpha; transcription regulation, DNA-binding, POU domain, diabetes, disease mutation, MODY3, transcription/DNA comple; 2.60A {Homo sapiens} SCOP: a.4.1.1 a.35.1.1
Probab=90.71  E-value=0.48  Score=25.75  Aligned_cols=45  Identities=16%  Similarity=0.260  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf             999999999999839949999998634299998875589994489
Q gi|254781147|r   20 MIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINID   64 (83)
Q Consensus        20 ~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~   64 (83)
                      ..|+..|+..+...+++|.+++..+|+|+++|+++.+.....+..
T Consensus        29 ~~~a~~Ik~~l~~~~i~q~~~~~~~~~Sqs~is~~l~~~~~~~~~   73 (194)
T 1ic8_A           29 WRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQ   73 (194)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHCCCHHHHHHHHHSBCCCCHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999999999828995335656677865402245689986655