HHsearch results for GI: 254781147 and protein with PDBid: 3bd1_A

>3bd1_A CRO protein; transcription factor, helix-turn-helix, prophage, structural evolution; 1.40A {Xylella fastidiosa ann-1}

Probab=96.47  E-value=0.0022  Score=39.63  Aligned_cols=46  Identities=15%  Similarity=0.103  Sum_probs=40.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC--CCHHHHC
Q ss_conf             9499999986342999988755899944899999999928--9999960
Q gi|254781147|r   35 LTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLD--TPLWKLL   81 (83)
Q Consensus        35 ltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~--i~~~~l~   81 (83)
                      =+|.+||+.+|||+++|++|-+|. .++.+....|+++.+  |+.++|.
T Consensus        12 G~q~~lAr~lGVsq~aVs~W~~~~-~vP~~~~~~Ie~aT~g~Vt~~eLr   59 (79)
T 3bd1_A           12 GSVSALAASLGVRQSAISNWRARG-RVPAERCIDIERVTNGAVICRELR   59 (79)
T ss_dssp             SSHHHHHHHHTCCHHHHHHHHHHT-CCCGGGHHHHHHHTTTSSCHHHHC
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCC-CCCHHHHHHHHHHHCCCCCHHHHC
T ss_conf             899999999299999999998469-999999999999978953199849