HHSEARCH alignment of GI: 254781147 and SCOP domain: d2awia1

Alignment

Probab=95.88  E-value=0.016  Score=33.08  Aligned_cols=59  Identities=15%  Similarity=0.327  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHC
Q ss_conf             999999999983994999999863429999887558999448999999999289999960
Q gi|254781147|r   22 FVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLL   81 (83)
Q Consensus        22 ~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~   81 (83)
                      +|..++++|++.++-|-++-.-+ +|.+.+-++|...+.++++.|.++++-||+...+.+
T Consensus         3 ig~~lkqir~elnyhqidlysgi-msksiyikveadsrpisveel~kfserlginffeil   61 (65)
T d2awia1           3 IGSVLKQIRQELNYHQIDLYSGI-MSKSVYIKVEADSRPISVEELSKFSERLGVNFFEIL   61 (65)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHTTT-SCHHHHHHHHTTCSCCBHHHHHHHHHHHTSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHH
T ss_conf             00699999998445675887512-201269998448886449999989998376399998

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: PrgX N-terminal domain-like
domain: PrgX
species: Enterococcus faecalis [TaxId: 1351]