HHSEARCH alignment of GI: 254781147 and SCOP domain: d2b5aa1

Alignment

Probab=99.56  E-value=8.1e-15  Score=106.08  Aligned_cols=66  Identities=24%  Similarity=0.473  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf             999999999999999839949999998634299998875589994489999999992899999608
Q gi|254781147|r   17 RERMIFVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLLK   82 (83)
Q Consensus        17 ~~~~~~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~~   82 (83)
                      ..+..||.+|+.+|+++||||+++|+.+|+|+++|++||+|+..|+++++.+||++|||++++||.
T Consensus         6 ~~~~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~   71 (77)
T d2b5aa1           6 EIKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFR   71 (77)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHC
T ss_conf             999999999999999809999999989797999999998699899999999999996989999854

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Regulatory protein C.BclI
species: Bacillus caldolyticus [TaxId: 1394]