HHSEARCH alignment of GI: 254781147 and SCOP domain: d2jn6a1

Alignment
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=91.18  E-value=0.11  Score=28.08  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=22.8

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             999839949999998634299998875
Q gi|254781147|r   29 IRKEAKLTQKEIRNRTGFAQSWISELE   55 (83)
Q Consensus        29 ~R~~~gltq~ela~~~gis~~~is~iE   55 (83)
                      .....|.|..++|+..||+.++|.+|-
T Consensus        18 ~~~~~g~s~~~vA~~lGIs~~tl~~W~   44 (89)
T d2jn6a1          18 YENSDGASLQQIANDLGINRVTLKNWI   44 (89)
T ss_dssp             HTTGGGSCHHHHHHHHTSCHHHHHHHH
T ss_pred             HHHCCCCCHHHHHHHHCCCHHHHHHHH
T ss_conf             998299859999999798988999999


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Cgl2762-like
domain: Uncharacterized protein Cgl2762
species: Corynebacterium glutamicum [TaxId: 1718]