HHsearch alignment for GI: 254781148 and conserved domain: pfam00772
>pfam00772 DnaB DnaB-like helicase N terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This N-terminal domain is required both for interaction with other proteins in the primosome and for DnaB helicase activity.
Probab=95.53 E-value=0.017 Score=34.73 Aligned_cols=45 Identities=36% Similarity=0.605 Sum_probs=38.1
Q ss_pred EECHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7100899988887065-55999985177621147899999985522
Q gi|254781148|r 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRKT 65 (69)
Q Consensus 21 igleqeilgslllkgn-lqpiisfldaqhfidpihsevfraitrkt 65 (69)
T Consensus 6 ~eaE~~lLg~lL~~~~~~~~i~~~l~~edF~~~~h~~If~~i~~l~ 51 (103)
T pfam00772 6 IEAEQAVLGALLLDPEAIDEVADILKPEDFYDPAHRLIFEAILELY 51 (103)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999999996974899999727999849599999999999998