BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781148|ref|YP_003065561.1| hypothetical protein
CLIBASIA_05275 [Candidatus Liberibacter asiaticus str. psy62]
(69 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781148|ref|YP_003065561.1| hypothetical protein CLIBASIA_05275 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040825|gb|ACT57621.1| hypothetical protein CLIBASIA_05275 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 69
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/69 (100%), Positives = 69/69 (100%)
Query: 1 MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA 60
MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA
Sbjct: 1 MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA 60
Query: 61 ITRKTTNEC 69
ITRKTTNEC
Sbjct: 61 ITRKTTNEC 69
>gi|315122540|ref|YP_004063029.1| replicative DNA helicase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495942|gb|ADR52541.1| replicative DNA helicase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 475
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 40/43 (93%)
Query: 19 YFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRAI 61
+F+ EQEILGSLLL GNL+PIISFLDA+HFIDP+HSE+FRAI
Sbjct: 8 FFVEFEQEILGSLLLNGNLKPIISFLDAKHFIDPVHSEIFRAI 50
>gi|294084214|ref|YP_003550972.1| Replicative DNA helicase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663787|gb|ADE38888.1| Replicative DNA helicase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 499
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 24 EQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
EQ +LG+LLL + ++ I L A+HF DP+H +F+ I R
Sbjct: 31 EQNLLGALLLDNSVMERIDDRLRAEHFYDPLHGRIFQTIMR 71
>gi|217077421|ref|YP_002335139.1| replicative DNA helicase [Thermosipho africanus TCF52B]
gi|217037276|gb|ACJ75798.1| replicative DNA helicase [Thermosipho africanus TCF52B]
Length = 445
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 19 YFIGLEQEILGSLLLKG-NLQPIISFLDAQHFIDPIHSEVFRAI 61
+ I EQ ILGS+L+ ++ IIS + ++ F DP H+E+F+AI
Sbjct: 6 HSIEAEQAILGSILIDPETIENIISIVSSRDFFDPRHAEIFKAI 49
>gi|254510772|ref|ZP_05122839.1| replicative DNA helicase [Rhodobacteraceae bacterium KLH11]
gi|221534483|gb|EEE37471.1| replicative DNA helicase [Rhodobacteraceae bacterium KLH11]
Length = 497
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+N ++ + I EQ++LG++L +L + S + A+HF DP+H+ ++ A TR N
Sbjct: 16 QNPETMPHSIEAEQQLLGAILTNNDLYDRVASIIGAEHFYDPVHARIYEVASTRIAKN 73
>gi|114328881|ref|YP_746038.1| replicative DNA helicase [Granulibacter bethesdensis CGDNIH1]
gi|114317055|gb|ABI63115.1| replicative DNA helicase [Granulibacter bethesdensis CGDNIH1]
Length = 507
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG+LL +S FL +HF DPIH ++ +I R+
Sbjct: 29 EQALLGALLTNNKAYERVSEFLAPEHFADPIHGRLYHSIARR 70
>gi|240850535|ref|YP_002971934.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240850933|ref|YP_002972333.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240851060|ref|YP_002972460.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267658|gb|ACS51246.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240268056|gb|ACS51644.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240268183|gb|ACS51771.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 481
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG++++ N L + FL A+HF +P+H ++F I++
Sbjct: 22 IEAEQALLGAIIINNNALDRVSDFLKAEHFFEPLHQKLFDIISK 65
>gi|221638338|ref|YP_002524600.1| replicative DNA helicase [Rhodobacter sphaeroides KD131]
gi|221159119|gb|ACM00099.1| Replicative DNA helicase [Rhodobacter sphaeroides KD131]
Length = 479
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DPIH +F
Sbjct: 6 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPIHQRIF 44
>gi|240850365|ref|YP_002971758.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267488|gb|ACS51076.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 482
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG++++ N L + FL A+HF +P+H +F I++
Sbjct: 24 IEAEQALLGAIIINNNALDRVSDFLKAEHFFEPLHQRLFDIISK 67
>gi|85703370|ref|ZP_01034474.1| replicative DNA helicase [Roseovarius sp. 217]
gi|85672298|gb|EAQ27155.1| replicative DNA helicase [Roseovarius sp. 217]
Length = 495
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
++ +S+ + I EQ++LG++L ++ I + + QHF DP+H+ +F
Sbjct: 15 QSADSVPHSIEAEQQLLGAILTNNDVYDRIAAIIGPQHFYDPVHARIF 62
>gi|67459252|ref|YP_246876.1| replicative DNA helicase [Rickettsia felis URRWXCal2]
gi|75536316|sp|Q4UL62|DNAB_RICFE RecName: Full=Replicative DNA helicase
gi|67004785|gb|AAY61711.1| Replicative DNA helicase [Rickettsia felis URRWXCal2]
Length = 494
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL ++HF +PIH +++ AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLSYVSEFLRSEHFFEPIHQKIYNAIEKIT 75
>gi|77462475|ref|YP_351979.1| replicative DNA helicase [Rhodobacter sphaeroides 2.4.1]
gi|77386893|gb|ABA78078.1| Replicative DNA helicase, DnaB [Rhodobacter sphaeroides 2.4.1]
Length = 496
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|126461353|ref|YP_001042467.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17029]
gi|332560360|ref|ZP_08414682.1| replicative DNA helicase [Rhodobacter sphaeroides WS8N]
gi|126103017|gb|ABN75695.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17029]
gi|332278072|gb|EGJ23387.1| replicative DNA helicase [Rhodobacter sphaeroides WS8N]
Length = 496
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|146276375|ref|YP_001166534.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17025]
gi|145554616|gb|ABP69229.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17025]
Length = 496
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|304319745|ref|YP_003853388.1| replicative DNA helicase [Parvularcula bermudensis HTCC2503]
gi|303298648|gb|ADM08247.1| replicative DNA helicase [Parvularcula bermudensis HTCC2503]
Length = 492
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 19 YFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITR 63
+ I EQ +LG++L + + SFL + HF DP+H ++ I +
Sbjct: 18 FSIEAEQAVLGAILFDNEVFYRVSSFLKSDHFYDPVHGRIYETIEK 63
>gi|296532302|ref|ZP_06895041.1| replicative DNA helicase DnaB [Roseomonas cervicalis ATCC 49957]
gi|296267378|gb|EFH13264.1| replicative DNA helicase DnaB [Roseomonas cervicalis ATCC 49957]
Length = 510
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG+LL +S FL +HF D +H +F AI R+
Sbjct: 26 EQALLGALLANNKAYERVSEFLAPEHFADAVHGRIFAAIQRR 67
>gi|229586863|ref|YP_002845364.1| replicative DNA helicase [Rickettsia africae ESF-5]
gi|228021913|gb|ACP53621.1| Replicative DNA helicase [Rickettsia africae ESF-5]
Length = 494
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYKAIEKIT 75
>gi|157828673|ref|YP_001494915.1| replicative DNA helicase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933392|ref|YP_001650181.1| replicative DNA helicase [Rickettsia rickettsii str. Iowa]
gi|157801154|gb|ABV76407.1| replicative DNA helicase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908479|gb|ABY72775.1| replicative DNA helicase [Rickettsia rickettsii str. Iowa]
Length = 494
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 33 EQMLLGAILTNNELLNYVSEFLRDEHFFEPIHKKIYKAIEKIT 75
>gi|15892726|ref|NP_360440.1| replicative DNA helicase [Rickettsia conorii str. Malish 7]
gi|34581550|ref|ZP_00143030.1| replicative DNA helicase [Rickettsia sibirica 246]
gi|20137862|sp|Q92HG8|DNAB_RICCN RecName: Full=Replicative DNA helicase
gi|15619902|gb|AAL03341.1| replicative DNA helicase [Rickettsia conorii str. Malish 7]
gi|28262935|gb|EAA26439.1| replicative DNA helicase [Rickettsia sibirica 246]
Length = 494
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYKAIEKIT 75
>gi|23014153|ref|ZP_00053985.1| COG0305: Replicative DNA helicase [Magnetospirillum
magnetotacticum MS-1]
Length = 161
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVF 58
EQ +LG++LL +S FL A+HF DP+H +F
Sbjct: 28 EQALLGAILLSNRAYERVSEFLKAEHFADPVHGRIF 63
>gi|114771866|ref|ZP_01449259.1| replicative DNA helicase [alpha proteobacterium HTCC2255]
gi|114547682|gb|EAU50573.1| replicative DNA helicase [alpha proteobacterium HTCC2255]
Length = 499
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITRK 64
I EQ +LG+LL+ ++ I S + HF DP+H+ +F I +
Sbjct: 25 IEAEQALLGALLVNNDVYDKIASIVKDIHFFDPVHARIFETIANR 69
>gi|149203832|ref|ZP_01880801.1| replicative DNA helicase [Roseovarius sp. TM1035]
gi|149142949|gb|EDM30991.1| replicative DNA helicase [Roseovarius sp. TM1035]
Length = 495
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 16 SIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
S+ + I EQ++LG++L ++ I + + QHF DP+H+ +F
Sbjct: 19 SVPHSIEAEQQLLGAILTNNDVYDRIAAIIGPQHFYDPVHARIF 62
>gi|126728692|ref|ZP_01744507.1| replicative DNA helicase [Sagittula stellata E-37]
gi|126710622|gb|EBA09673.1| replicative DNA helicase [Sagittula stellata E-37]
Length = 490
Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + A+HF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTDNDIFDRVASIIRAEHFYDPVHTRIF 62
>gi|227540568|ref|ZP_03970617.1| DNA replication protein DnaC [Sphingobacterium spiritivorum ATCC
33300]
gi|300771347|ref|ZP_07081223.1| replicative DNA helicase DnaB [Sphingobacterium spiritivorum ATCC
33861]
gi|227239650|gb|EEI89665.1| DNA replication protein DnaC [Sphingobacterium spiritivorum ATCC
33300]
gi|300762017|gb|EFK58837.1| replicative DNA helicase DnaB [Sphingobacterium spiritivorum ATCC
33861]
Length = 532
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I LE+ +LG+L+L+ N L II L A+ F H ++F AI
Sbjct: 42 IDLEEAVLGALMLEKNALSEIIDILKAESFYKEAHQKIFEAI 83
>gi|83311196|ref|YP_421460.1| replicative DNA helicase [Magnetospirillum magneticum AMB-1]
gi|82946037|dbj|BAE50901.1| Replicative DNA helicase [Magnetospirillum magneticum AMB-1]
Length = 487
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 24 EQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
EQ +LG++LL + + FL +HF DP+H +F
Sbjct: 9 EQALLGAILLSNRAFERVSEFLKPEHFADPVHGRIF 44
>gi|91977459|ref|YP_570118.1| replicative DNA helicase [Rhodopseudomonas palustris BisB5]
gi|91683915|gb|ABE40217.1| primary replicative DNA helicase [Rhodopseudomonas palustris
BisB5]
Length = 498
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+A+HF +PIH +F
Sbjct: 27 IEAEQALLGAILVNNDAFYRVSDFLEAKHFFEPIHQTIF 65
>gi|148261855|ref|YP_001235982.1| replicative DNA helicase [Acidiphilium cryptum JF-5]
gi|326405360|ref|YP_004285442.1| replicative DNA helicase [Acidiphilium multivorum AIU301]
gi|146403536|gb|ABQ32063.1| primary replicative DNA helicase [Acidiphilium cryptum JF-5]
gi|325052222|dbj|BAJ82560.1| replicative DNA helicase [Acidiphilium multivorum AIU301]
Length = 494
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG+LL +S FL +HF D +H ++ AI R+
Sbjct: 23 EQALLGALLANNKAYERVSEFLAPEHFADAVHGRIYEAIARR 64
>gi|262277397|ref|ZP_06055190.1| replicative DNA helicase [alpha proteobacterium HIMB114]
gi|262224500|gb|EEY74959.1| replicative DNA helicase [alpha proteobacterium HIMB114]
Length = 473
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAIT 62
NNN I I EQ ILGS+L L I ++ HF D IH ++++ I+
Sbjct: 11 NNNQIPKNIEAEQTILGSILENNELFDEITDEINEGHFYDTIHQKIYKVIS 61
>gi|288962768|ref|YP_003453062.1| replicative DNA helicase [Azospirillum sp. B510]
gi|288915034|dbj|BAI76518.1| replicative DNA helicase [Azospirillum sp. B510]
Length = 501
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 24 EQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
EQ +LG++L+ + + FL +HF DP H +F AI +
Sbjct: 33 EQALLGAILVNNKAYEKVGEFLRPEHFYDPAHQRIFAAINK 73
>gi|110680418|ref|YP_683425.1| replicative DNA helicase [Roseobacter denitrificans OCh 114]
gi|109456534|gb|ABG32739.1| replicative DNA helicase [Roseobacter denitrificans OCh 114]
Length = 497
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + QHF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTNNDIYDRVASIIGPQHFYDPVHARIF 62
>gi|260433529|ref|ZP_05787500.1| replicative DNA helicase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417357|gb|EEX10616.1| replicative DNA helicase [Silicibacter lacuscaerulensis ITI-1157]
Length = 503
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITRK 64
+N ++ + I EQ++LG++L +L + S + +HF DP+H+ ++ + +
Sbjct: 22 QNAETMPHSIEAEQQLLGAILTNNDLYDRVASIIGPEHFYDPVHARIYEVASAR 75
>gi|114569760|ref|YP_756440.1| replicative DNA helicase [Maricaulis maris MCS10]
gi|114340222|gb|ABI65502.1| replicative DNA helicase [Maricaulis maris MCS10]
Length = 494
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 24 EQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAIT 62
EQ LG+LL + + +L A+HF DP+H +F T
Sbjct: 27 EQAFLGALLYDNEMFHRVADWLKAEHFYDPVHGRIFETAT 66
>gi|307945027|ref|ZP_07660363.1| putative replicative DNA helicase [Roseibium sp. TrichSKD4]
gi|307770900|gb|EFO30125.1| putative replicative DNA helicase [Roseibium sp. TrichSKD4]
Length = 466
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNLQ-PIISFLDAQHFIDPIHSEVFRAI 61
+NN+ ++ I E+ +LGSLL + ++ L A+HFI PI+ ++ A+
Sbjct: 2 QNNDKVHQTIMAERSVLGSLLDNPSAYFEVLETLKAEHFIRPINQRIYEAM 52
>gi|254466010|ref|ZP_05079421.1| replicative DNA helicase [Rhodobacterales bacterium Y4I]
gi|206686918|gb|EDZ47400.1| replicative DNA helicase [Rhodobacterales bacterium Y4I]
Length = 508
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 14 NNSIYYFIGLEQEILGSLLLKGNLQPIISFL-DAQHFIDPIHSEVFR-AITRKTTN 67
+N + + + EQ++LG++L + I+ + D+ HF DP+H+ ++ A R + N
Sbjct: 31 DNELPHSVEAEQQLLGAILTNNEVYDKIALIIDSSHFYDPVHARIYEVAAARISKN 86
>gi|300023237|ref|YP_003755848.1| replicative DNA helicase [Hyphomicrobium denitrificans ATCC
51888]
gi|299525058|gb|ADJ23527.1| replicative DNA helicase [Hyphomicrobium denitrificans ATCC
51888]
Length = 503
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 24 EQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
EQ +LG++L+ L + SFL HF DP+H ++ +
Sbjct: 34 EQALLGAILVNNEALDRVSSFLSPDHFFDPLHGRIYETL 72
>gi|254449859|ref|ZP_05063296.1| replicative DNA helicase [Octadecabacter antarcticus 238]
gi|198264265|gb|EDY88535.1| replicative DNA helicase [Octadecabacter antarcticus 238]
Length = 495
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 15 NSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
+S+ + I EQ++LG++L ++ I S + HF DP+H+ +F
Sbjct: 18 DSVPHSIEAEQQLLGAILTNNDIFDRIASIVGPSHFYDPVHARIF 62
>gi|86137541|ref|ZP_01056118.1| replicative DNA helicase [Roseobacter sp. MED193]
gi|85825876|gb|EAQ46074.1| replicative DNA helicase [Roseobacter sp. MED193]
Length = 543
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 24 EQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
EQ++LG++L ++ I S ++A HF DP+H+ ++ A R + N
Sbjct: 74 EQQLLGAILTNNDVYDRIASIINATHFYDPVHTRIYEIAAARISKN 119
>gi|83952041|ref|ZP_00960773.1| replicative DNA helicase [Roseovarius nubinhibens ISM]
gi|83837047|gb|EAP76344.1| replicative DNA helicase [Roseovarius nubinhibens ISM]
Length = 514
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 15 NSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
+++ + I EQ++LG++L ++ I S + QHF DP+H+ ++
Sbjct: 37 DTMPHSIEAEQQLLGAILTNNDVYDKIASIIGPQHFYDPVHARIY 81
>gi|254438961|ref|ZP_05052455.1| replicative DNA helicase [Octadecabacter antarcticus 307]
gi|198254407|gb|EDY78721.1| replicative DNA helicase [Octadecabacter antarcticus 307]
Length = 495
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
N +S + I EQ++LG++L ++ I S + HF DP+H+ +F
Sbjct: 16 NVDSAPHSIEAEQQLLGAILTNNDIFDRIASIIGPDHFYDPVHARIF 62
>gi|328885640|emb|CCA58879.1| hypothetical protein SVEN_5593 [Streptomyces venezuelae ATCC
10712]
Length = 381
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 24 EQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRAITRKTTNE 68
EQ +LG++LL+ L P + L F P+H VF A+ T E
Sbjct: 25 EQALLGAVLLQPALLPAVEDLSPSFFDSPVHGAVFAAMREVPTPE 69
>gi|238650307|ref|YP_002916159.1| replicative DNA helicase [Rickettsia peacockii str. Rustic]
gi|238624405|gb|ACR47111.1| replicative DNA helicase [Rickettsia peacockii str. Rustic]
Length = 494
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
EQ +LG++L L +S FL HF +PIH ++++AI + T
Sbjct: 33 EQMLLGAILTNNELLNYVSEFLRDAHFFEPIHKKIYKAIEKIT 75
>gi|239947672|ref|ZP_04699425.1| replicative DNA helicase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921948|gb|EER21972.1| replicative DNA helicase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 494
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
EQ +LG++L L +S FL +HF +PIH +++ AI + T
Sbjct: 33 EQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYEAIEKIT 75
>gi|27379182|ref|NP_770711.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
gi|27352333|dbj|BAC49336.1| alanine racemase [Bradyrhizobium japonicum USDA 110]
Length = 503
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+A+HF +P+H +F
Sbjct: 27 IEAEQSLLGAILVNNDAFYRVSDFLEAKHFFEPLHQTIF 65
>gi|84515511|ref|ZP_01002873.1| replicative DNA helicase [Loktanella vestfoldensis SKA53]
gi|84510794|gb|EAQ07249.1| replicative DNA helicase [Loktanella vestfoldensis SKA53]
Length = 497
Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
I EQ++LG++L ++ + + + +HF DP+H+ +F A TR + N
Sbjct: 24 IEAEQQLLGAILTNNDIFDRVAAIIGPKHFYDPVHARIFETAATRISKN 72
>gi|49474084|ref|YP_032126.1| replicative DNA helicase [Bartonella quintana str. Toulouse]
gi|49239588|emb|CAF25945.1| Replicative DNA helicase [Bartonella quintana str. Toulouse]
Length = 500
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG+LL+ + L + FL +HF +P+H +++ ++R
Sbjct: 27 IEAEQALLGALLINNDALDCVSDFLKPEHFFEPLHQKIYDVLSR 70
>gi|157825863|ref|YP_001493583.1| replicative DNA helicase [Rickettsia akari str. Hartford]
gi|157799821|gb|ABV75075.1| replicative DNA helicase [Rickettsia akari str. Hartford]
Length = 494
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
EQ +LG++L L +S FL +HF +PIH +++ AI + T
Sbjct: 33 EQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYNAIEKIT 75
>gi|158422458|ref|YP_001523750.1| DnaB helicase [Azorhizobium caulinodans ORS 571]
gi|158329347|dbj|BAF86832.1| DnaB helicase [Azorhizobium caulinodans ORS 571]
Length = 473
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 23 LEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRK 64
LEQE+LG L+ L + S L+ +HF P+H +F A+ +
Sbjct: 14 LEQELLGCLICAPEALAAVASSLEPEHFAQPLHGRLFEALKAR 56
>gi|58039659|ref|YP_191623.1| replicative DNA helicase [Gluconobacter oxydans 621H]
gi|58002073|gb|AAW60967.1| Replicative DNA helicase [Gluconobacter oxydans 621H]
Length = 504
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG++L +S FL+ HF DP++ ++ AI R+
Sbjct: 35 EQALLGAILTNNKAYERVSDFLEPAHFSDPLNGRIYEAIARR 76
>gi|154253907|ref|YP_001414731.1| replicative DNA helicase [Parvibaculum lavamentivorans DS-1]
gi|154157857|gb|ABS65074.1| replicative DNA helicase [Parvibaculum lavamentivorans DS-1]
Length = 497
Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 21 IGLEQEILGSLLLKG-NLQPIISFLDAQHFIDPIHSEVFRAITRKTT 66
I EQ +LG++L+ + + SFL+ HF D +H ++ A + T
Sbjct: 27 IDAEQALLGAMLVNNESYDRVASFLEPSHFFDAVHGRIYEAAAKLIT 73
>gi|114704796|ref|ZP_01437704.1| replicative DNA helicase [Fulvimarina pelagi HTCC2506]
gi|114539581|gb|EAU42701.1| replicative DNA helicase [Fulvimarina pelagi HTCC2506]
Length = 496
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 24 EQEILGSLLLKGNLQPII-SFLDAQHFIDPIHSEVF 58
EQ +LG++L+ + I+ FL A HF +P+H ++F
Sbjct: 26 EQALLGAILVNNDAYYIVHDFLKADHFYEPLHRDIF 61
>gi|254487655|ref|ZP_05100860.1| replicative DNA helicase [Roseobacter sp. GAI101]
gi|214044524|gb|EEB85162.1| replicative DNA helicase [Roseobacter sp. GAI101]
Length = 498
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 16 SIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
S+ + I EQ++LG++L ++ + S + +HF DP+H+ +F
Sbjct: 19 SMPHSIEAEQQLLGAILTNNDIYDRVASIIGPKHFYDPVHARIF 62
>gi|240850215|ref|YP_002971608.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267338|gb|ACS50926.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 496
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 6 SKKYYSRNNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
SKK S + + Y I EQ +LG++ + + L + FL +HF +P+H +++ ++
Sbjct: 12 SKKEDSPSFRQLPYNIEAEQALLGAIFINNDSLDRVSDFLKPEHFFEPLHQKIYHVLS 69
>gi|157803634|ref|YP_001492183.1| replicative DNA helicase [Rickettsia canadensis str. McKiel]
gi|157784897|gb|ABV73398.1| replicative DNA helicase [Rickettsia canadensis str. McKiel]
Length = 494
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAI 61
I EQ +LG++L L +S FL +HF +PIH +++ AI
Sbjct: 30 IQAEQMLLGAILTNNELLNYVSEFLRLEHFFEPIHQKIYNAI 71
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254781148|ref|YP_003065561.1| hypothetical protein CLIBASIA_05275 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040825|gb|ACT57621.1| hypothetical protein CLIBASIA_05275 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 69
Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/69 (100%), Positives = 69/69 (100%)
Query: 1 MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA 60
MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA
Sbjct: 1 MLSDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRA 60
Query: 61 ITRKTTNEC 69
ITRKTTNEC
Sbjct: 61 ITRKTTNEC 69
>gi|315122540|ref|YP_004063029.1| replicative DNA helicase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495942|gb|ADR52541.1| replicative DNA helicase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 475
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 40/43 (93%)
Query: 19 YFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRAI 61
+F+ EQEILGSLLL GNL+PIISFLDA+HFIDP+HSE+FRAI
Sbjct: 8 FFVEFEQEILGSLLLNGNLKPIISFLDAKHFIDPVHSEIFRAI 50
>gi|217077421|ref|YP_002335139.1| replicative DNA helicase [Thermosipho africanus TCF52B]
gi|217037276|gb|ACJ75798.1| replicative DNA helicase [Thermosipho africanus TCF52B]
Length = 445
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLK-GNLQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILGS+L+ ++ IIS + ++ F DP H+E+F+AI
Sbjct: 8 IEAEQAILGSILIDPETIENIISIVSSRDFFDPRHAEIFKAI 49
>gi|240850535|ref|YP_002971934.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240850933|ref|YP_002972333.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240851060|ref|YP_002972460.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267658|gb|ACS51246.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240268056|gb|ACS51644.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240268183|gb|ACS51771.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 481
Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRKTTN 67
I EQ +LG++++ N L + FL A+HF +P+H ++F I++ N
Sbjct: 22 IEAEQALLGAIIINNNALDRVSDFLKAEHFFEPLHQKLFDIISKIIQN 69
>gi|240850365|ref|YP_002971758.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267488|gb|ACS51076.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 482
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRKTTN 67
I EQ +LG++++ N L + FL A+HF +P+H +F I++ N
Sbjct: 24 IEAEQALLGAIIINNNALDRVSDFLKAEHFFEPLHQRLFDIISKIIQN 71
>gi|254510772|ref|ZP_05122839.1| replicative DNA helicase [Rhodobacteraceae bacterium KLH11]
gi|221534483|gb|EEE37471.1| replicative DNA helicase [Rhodobacteraceae bacterium KLH11]
Length = 497
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+N ++ + I EQ++LG++L +L + S + A+HF DP+H+ ++ A TR N
Sbjct: 16 QNPETMPHSIEAEQQLLGAILTNNDLYDRVASIIGAEHFYDPVHARIYEVASTRIAKN 73
>gi|221638338|ref|YP_002524600.1| replicative DNA helicase [Rhodobacter sphaeroides KD131]
gi|221159119|gb|ACM00099.1| Replicative DNA helicase [Rhodobacter sphaeroides KD131]
Length = 479
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DPIH +F
Sbjct: 6 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPIHQRIF 44
>gi|77462475|ref|YP_351979.1| replicative DNA helicase [Rhodobacter sphaeroides 2.4.1]
gi|77386893|gb|ABA78078.1| Replicative DNA helicase, DnaB [Rhodobacter sphaeroides 2.4.1]
Length = 496
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|126461353|ref|YP_001042467.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17029]
gi|332560360|ref|ZP_08414682.1| replicative DNA helicase [Rhodobacter sphaeroides WS8N]
gi|126103017|gb|ABN75695.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17029]
gi|332278072|gb|EGJ23387.1| replicative DNA helicase [Rhodobacter sphaeroides WS8N]
Length = 496
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|146276375|ref|YP_001166534.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17025]
gi|145554616|gb|ABP69229.1| replicative DNA helicase [Rhodobacter sphaeroides ATCC 17025]
Length = 496
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + A+HF DP+H +F
Sbjct: 23 IEAEQQLLGAILTNNDIFDRIASVIRAEHFFDPVHQRIF 61
>gi|91977459|ref|YP_570118.1| replicative DNA helicase [Rhodopseudomonas palustris BisB5]
gi|91683915|gb|ABE40217.1| primary replicative DNA helicase [Rhodopseudomonas palustris
BisB5]
Length = 498
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+A+HF +PIH +F
Sbjct: 27 IEAEQALLGAILVNNDAFYRVSDFLEAKHFFEPIHQTIF 65
>gi|114771866|ref|ZP_01449259.1| replicative DNA helicase [alpha proteobacterium HTCC2255]
gi|114547682|gb|EAU50573.1| replicative DNA helicase [alpha proteobacterium HTCC2255]
Length = 499
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITRK 64
I EQ +LG+LL+ ++ I S + HF DP+H+ +F I +
Sbjct: 25 IEAEQALLGALLVNNDVYDKIASIVKDIHFFDPVHARIFETIANR 69
>gi|294084214|ref|YP_003550972.1| Replicative DNA helicase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663787|gb|ADE38888.1| Replicative DNA helicase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 499
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 24 EQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVFRAITR 63
EQ +LG+LLL ++ I L A+HF DP+H +F+ I R
Sbjct: 31 EQNLLGALLLDNSVMERIDDRLRAEHFYDPLHGRIFQTIMR 71
>gi|49474084|ref|YP_032126.1| replicative DNA helicase [Bartonella quintana str. Toulouse]
gi|49239588|emb|CAF25945.1| Replicative DNA helicase [Bartonella quintana str. Toulouse]
Length = 500
Score = 38.8 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG+LL+ + L + FL +HF +P+H +++ ++R
Sbjct: 27 IEAEQALLGALLINNDALDCVSDFLKPEHFFEPLHQKIYDVLSR 70
>gi|84515511|ref|ZP_01002873.1| replicative DNA helicase [Loktanella vestfoldensis SKA53]
gi|84510794|gb|EAQ07249.1| replicative DNA helicase [Loktanella vestfoldensis SKA53]
Length = 497
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
I EQ++LG++L ++ + + + +HF DP+H+ +F A TR + N
Sbjct: 24 IEAEQQLLGAILTNNDIFDRVAAIIGPKHFYDPVHARIFETAATRISKN 72
>gi|304319745|ref|YP_003853388.1| replicative DNA helicase [Parvularcula bermudensis HTCC2503]
gi|303298648|gb|ADM08247.1| replicative DNA helicase [Parvularcula bermudensis HTCC2503]
Length = 492
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 19 YFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITR 63
+ I EQ +LG++L + + SFL + HF DP+H ++ I +
Sbjct: 18 FSIEAEQAVLGAILFDNEVFYRVSSFLKSDHFYDPVHGRIYETIEK 63
>gi|67459252|ref|YP_246876.1| replicative DNA helicase [Rickettsia felis URRWXCal2]
gi|75536316|sp|Q4UL62|DNAB_RICFE RecName: Full=Replicative DNA helicase
gi|67004785|gb|AAY61711.1| Replicative DNA helicase [Rickettsia felis URRWXCal2]
Length = 494
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL ++HF +PIH +++ AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLSYVSEFLRSEHFFEPIHQKIYNAIEKIT 75
>gi|85703370|ref|ZP_01034474.1| replicative DNA helicase [Roseovarius sp. 217]
gi|85672298|gb|EAQ27155.1| replicative DNA helicase [Roseovarius sp. 217]
Length = 495
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
++ +S+ + I EQ++LG++L ++ I + + QHF DP+H+ +F
Sbjct: 15 QSADSVPHSIEAEQQLLGAILTNNDVYDRIAAIIGPQHFYDPVHARIF 62
>gi|254466010|ref|ZP_05079421.1| replicative DNA helicase [Rhodobacterales bacterium Y4I]
gi|206686918|gb|EDZ47400.1| replicative DNA helicase [Rhodobacterales bacterium Y4I]
Length = 508
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 14 NNSIYYFIGLEQEILGSLLLKGNLQPIISFL-DAQHFIDPIHSEVFR-AITRKTTN 67
+N + + + EQ++LG++L + I+ + D+ HF DP+H+ ++ A R + N
Sbjct: 31 DNELPHSVEAEQQLLGAILTNNEVYDKIALIIDSSHFYDPVHARIYEVAAARISKN 86
>gi|86137541|ref|ZP_01056118.1| replicative DNA helicase [Roseobacter sp. MED193]
gi|85825876|gb|EAQ46074.1| replicative DNA helicase [Roseobacter sp. MED193]
Length = 543
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ I S ++A HF DP+H+ ++ A R + N
Sbjct: 71 VEAEQQLLGAILTNNDVYDRIASIINATHFYDPVHTRIYEIAAARISKN 119
>gi|27379182|ref|NP_770711.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
gi|27352333|dbj|BAC49336.1| alanine racemase [Bradyrhizobium japonicum USDA 110]
Length = 503
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+A+HF +P+H +F
Sbjct: 27 IEAEQSLLGAILVNNDAFYRVSDFLEAKHFFEPLHQTIF 65
>gi|229586863|ref|YP_002845364.1| replicative DNA helicase [Rickettsia africae ESF-5]
gi|228021913|gb|ACP53621.1| Replicative DNA helicase [Rickettsia africae ESF-5]
Length = 494
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYKAIEKIT 75
>gi|157828673|ref|YP_001494915.1| replicative DNA helicase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933392|ref|YP_001650181.1| replicative DNA helicase [Rickettsia rickettsii str. Iowa]
gi|157801154|gb|ABV76407.1| replicative DNA helicase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908479|gb|ABY72775.1| replicative DNA helicase [Rickettsia rickettsii str. Iowa]
Length = 494
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHKKIYKAIEKIT 75
>gi|15892726|ref|NP_360440.1| replicative DNA helicase [Rickettsia conorii str. Malish 7]
gi|34581550|ref|ZP_00143030.1| replicative DNA helicase [Rickettsia sibirica 246]
gi|20137862|sp|Q92HG8|DNAB_RICCN RecName: Full=Replicative DNA helicase
gi|15619902|gb|AAL03341.1| replicative DNA helicase [Rickettsia conorii str. Malish 7]
gi|28262935|gb|EAA26439.1| replicative DNA helicase [Rickettsia sibirica 246]
Length = 494
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYKAIEKIT 75
>gi|296532302|ref|ZP_06895041.1| replicative DNA helicase DnaB [Roseomonas cervicalis ATCC 49957]
gi|296267378|gb|EFH13264.1| replicative DNA helicase DnaB [Roseomonas cervicalis ATCC 49957]
Length = 510
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
+ EQ +LG+LL +S FL +HF D +H +F AI R+
Sbjct: 23 LEAEQALLGALLANNKAYERVSEFLAPEHFADAVHGRIFAAIQRR 67
>gi|114328881|ref|YP_746038.1| replicative DNA helicase [Granulibacter bethesdensis CGDNIH1]
gi|114317055|gb|ABI63115.1| replicative DNA helicase [Granulibacter bethesdensis CGDNIH1]
Length = 507
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG+LL +S FL +HF DPIH ++ +I R+
Sbjct: 29 EQALLGALLTNNKAYERVSEFLAPEHFADPIHGRLYHSIARR 70
>gi|110680418|ref|YP_683425.1| replicative DNA helicase [Roseobacter denitrificans OCh 114]
gi|109456534|gb|ABG32739.1| replicative DNA helicase [Roseobacter denitrificans OCh 114]
Length = 497
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + QHF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTNNDIYDRVASIIGPQHFYDPVHARIF 62
>gi|240850215|ref|YP_002971608.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
gi|240267338|gb|ACS50926.1| replicative DNA helicase DnaB [Bartonella grahamii as4aup]
Length = 496
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 6 SKKYYSRNNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
SKK S + + Y I EQ +LG++ + + L + FL +HF +P+H +++ ++
Sbjct: 12 SKKEDSPSFRQLPYNIEAEQALLGAIFINNDSLDRVSDFLKPEHFFEPLHQKIYHVLS 69
>gi|260433529|ref|ZP_05787500.1| replicative DNA helicase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417357|gb|EEX10616.1| replicative DNA helicase [Silicibacter lacuscaerulensis ITI-1157]
Length = 503
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITRK 64
+N ++ + I EQ++LG++L +L + S + +HF DP+H+ ++ + +
Sbjct: 22 QNAETMPHSIEAEQQLLGAILTNNDLYDRVASIIGPEHFYDPVHARIYEVASAR 75
>gi|254487655|ref|ZP_05100860.1| replicative DNA helicase [Roseobacter sp. GAI101]
gi|214044524|gb|EEB85162.1| replicative DNA helicase [Roseobacter sp. GAI101]
Length = 498
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 16 SIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
S+ + I EQ++LG++L ++ + S + +HF DP+H+ +F
Sbjct: 19 SMPHSIEAEQQLLGAILTNNDIYDRVASIIGPKHFYDPVHARIF 62
>gi|149203832|ref|ZP_01880801.1| replicative DNA helicase [Roseovarius sp. TM1035]
gi|149142949|gb|EDM30991.1| replicative DNA helicase [Roseovarius sp. TM1035]
Length = 495
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 16 SIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
S+ + I EQ++LG++L ++ I + + QHF DP+H+ +F
Sbjct: 19 SVPHSIEAEQQLLGAILTNNDVYDRIAAIIGPQHFYDPVHARIF 62
>gi|254449859|ref|ZP_05063296.1| replicative DNA helicase [Octadecabacter antarcticus 238]
gi|198264265|gb|EDY88535.1| replicative DNA helicase [Octadecabacter antarcticus 238]
Length = 495
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 15 NSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
+S+ + I EQ++LG++L ++ I S + HF DP+H+ +F
Sbjct: 18 DSVPHSIEAEQQLLGAILTNNDIFDRIASIVGPSHFYDPVHARIF 62
>gi|49475322|ref|YP_033363.1| replicative DNA helicase [Bartonella henselae str. Houston-1]
gi|49238128|emb|CAF27335.1| Replicative DNA helicase [Bartonella henselae str. Houston-1]
Length = 495
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRKTTN 67
I EQ +LG+LL+ + L + FL +HF +P+H +++ ++ N
Sbjct: 26 IEAEQALLGALLINNDALDRVSDFLKPEHFFEPLHQKIYDVVSHLIKN 73
>gi|148261855|ref|YP_001235982.1| replicative DNA helicase [Acidiphilium cryptum JF-5]
gi|326405360|ref|YP_004285442.1| replicative DNA helicase [Acidiphilium multivorum AIU301]
gi|146403536|gb|ABQ32063.1| primary replicative DNA helicase [Acidiphilium cryptum JF-5]
gi|325052222|dbj|BAJ82560.1| replicative DNA helicase [Acidiphilium multivorum AIU301]
Length = 494
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
+ EQ +LG+LL +S FL +HF D +H ++ AI R+
Sbjct: 20 LEAEQALLGALLANNKAYERVSEFLAPEHFADAVHGRIYEAIARR 64
>gi|161018423|emb|CAK01981.1| replicative DNA helicase (fragment1) [Bartonella tribocorum CIP
105476]
Length = 326
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ +LG++L+ + L+ + FL A+HF + +H ++F I
Sbjct: 27 IEAEQALLGAILINNDALESVSDFLKAEHFFETLHQKIFSTI 68
>gi|254438961|ref|ZP_05052455.1| replicative DNA helicase [Octadecabacter antarcticus 307]
gi|198254407|gb|EDY78721.1| replicative DNA helicase [Octadecabacter antarcticus 307]
Length = 495
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
N +S + I EQ++LG++L ++ I S + HF DP+H+ +F
Sbjct: 16 NVDSAPHSIEAEQQLLGAILTNNDIFDRIASIIGPDHFYDPVHARIF 62
>gi|262277397|ref|ZP_06055190.1| replicative DNA helicase [alpha proteobacterium HIMB114]
gi|262224500|gb|EEY74959.1| replicative DNA helicase [alpha proteobacterium HIMB114]
Length = 473
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAIT 62
NNN I I EQ ILGS+L L I ++ HF D IH ++++ I+
Sbjct: 11 NNNQIPKNIEAEQTILGSILENNELFDEITDEINEGHFYDTIHQKIYKVIS 61
>gi|83952041|ref|ZP_00960773.1| replicative DNA helicase [Roseovarius nubinhibens ISM]
gi|83837047|gb|EAP76344.1| replicative DNA helicase [Roseovarius nubinhibens ISM]
Length = 514
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ I S + QHF DP+H+ ++
Sbjct: 43 IEAEQQLLGAILTNNDVYDKIASIIGPQHFYDPVHARIY 81
>gi|83953863|ref|ZP_00962584.1| replicative DNA helicase [Sulfitobacter sp. NAS-14.1]
gi|83841808|gb|EAP80977.1| replicative DNA helicase [Sulfitobacter sp. NAS-14.1]
Length = 481
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + +HF DP+H+ +F
Sbjct: 5 IEAEQQLLGAILTNNDIYDRVASVIGPKHFYDPVHARIF 43
>gi|83942622|ref|ZP_00955083.1| replicative DNA helicase [Sulfitobacter sp. EE-36]
gi|83846715|gb|EAP84591.1| replicative DNA helicase [Sulfitobacter sp. EE-36]
Length = 500
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + +HF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTNNDIYDRVASVIGPKHFYDPVHARIF 62
>gi|126735555|ref|ZP_01751300.1| replicative DNA helicase [Roseobacter sp. CCS2]
gi|126714742|gb|EBA11608.1| replicative DNA helicase [Roseobacter sp. CCS2]
Length = 495
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + +HF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTNNDVFDRVASIIGPKHFYDPVHARIF 62
>gi|23014153|ref|ZP_00053985.1| COG0305: Replicative DNA helicase [Magnetospirillum
magnetotacticum MS-1]
Length = 161
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 22 GLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVF 58
EQ +LG++LL +S FL A+HF DP+H +F
Sbjct: 26 EAEQALLGAILLSNRAYERVSEFLKAEHFADPVHGRIF 63
>gi|119387174|ref|YP_918229.1| replicative DNA helicase [Paracoccus denitrificans PD1222]
gi|119377769|gb|ABL72533.1| replicative DNA helicase [Paracoccus denitrificans PD1222]
Length = 499
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 19 YFIGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVF 58
+ I EQ++LG+LL + +S + A+HF DP+H ++
Sbjct: 26 FSIEAEQQLLGALLTNNEVYDHVSRIIQARHFYDPVHRRIY 66
>gi|126728692|ref|ZP_01744507.1| replicative DNA helicase [Sagittula stellata E-37]
gi|126710622|gb|EBA09673.1| replicative DNA helicase [Sagittula stellata E-37]
Length = 490
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + A+HF DP+H+ +F
Sbjct: 24 IEAEQQLLGAILTDNDIFDRVASIIRAEHFYDPVHTRIF 62
>gi|238650307|ref|YP_002916159.1| replicative DNA helicase [Rickettsia peacockii str. Rustic]
gi|238624405|gb|ACR47111.1| replicative DNA helicase [Rickettsia peacockii str. Rustic]
Length = 494
Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL HF +PIH ++++AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDAHFFEPIHKKIYKAIEKIT 75
>gi|259416264|ref|ZP_05740184.1| replicative DNA helicase [Silicibacter sp. TrichCH4B]
gi|259347703|gb|EEW59480.1| replicative DNA helicase [Silicibacter sp. TrichCH4B]
Length = 505
Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ + S +++ HF DP+H+ ++ A R + N
Sbjct: 35 VEAEQQLLGAILTNNDVYDKVASIINSSHFYDPVHARIYEVAAARISKN 83
>gi|99081619|ref|YP_613773.1| replicative DNA helicase [Ruegeria sp. TM1040]
gi|99037899|gb|ABF64511.1| replicative DNA helicase [Ruegeria sp. TM1040]
Length = 505
Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ + S +++ HF DP+H+ ++ A R + N
Sbjct: 35 VEAEQQLLGAILTNNDVYDKVASIINSSHFYDPVHARIYEVAAARISKN 83
>gi|300023237|ref|YP_003755848.1| replicative DNA helicase [Hyphomicrobium denitrificans ATCC
51888]
gi|299525058|gb|ADJ23527.1| replicative DNA helicase [Hyphomicrobium denitrificans ATCC
51888]
Length = 503
Score = 37.3 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
+ EQ +LG++L+ L + SFL HF DP+H ++ +
Sbjct: 31 LEAEQALLGAILVNNEALDRVSSFLSPDHFFDPLHGRIYETL 72
>gi|239947672|ref|ZP_04699425.1| replicative DNA helicase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921948|gb|EER21972.1| replicative DNA helicase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 494
Score = 37.3 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH +++ AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYEAIEKIT 75
>gi|316933685|ref|YP_004108667.1| replicative DNA helicase [Rhodopseudomonas palustris DX-1]
gi|315601399|gb|ADU43934.1| replicative DNA helicase [Rhodopseudomonas palustris DX-1]
Length = 498
Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +PIH +F
Sbjct: 27 IEAEQALLGAILVNNDAFYRVSDFLEPKHFFEPIHQTIF 65
>gi|39936147|ref|NP_948423.1| replicative DNA helicase [Rhodopseudomonas palustris CGA009]
gi|192291865|ref|YP_001992470.1| replicative DNA helicase [Rhodopseudomonas palustris TIE-1]
gi|39650001|emb|CAE28525.1| replicative DNA helicase (dnaB) [Rhodopseudomonas palustris
CGA009]
gi|192285614|gb|ACF01995.1| replicative DNA helicase [Rhodopseudomonas palustris TIE-1]
Length = 498
Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +PIH +F
Sbjct: 27 IEAEQALLGAILVNNDAFYRVSDFLEPKHFFEPIHQTIF 65
>gi|157825863|ref|YP_001493583.1| replicative DNA helicase [Rickettsia akari str. Hartford]
gi|157799821|gb|ABV75075.1| replicative DNA helicase [Rickettsia akari str. Hartford]
Length = 494
Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF +PIH +++ AI + T
Sbjct: 30 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFEPIHQKIYNAIEKIT 75
>gi|288962768|ref|YP_003453062.1| replicative DNA helicase [Azospirillum sp. B510]
gi|288915034|dbj|BAI76518.1| replicative DNA helicase [Azospirillum sp. B510]
Length = 501
Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 6 SKKYYSRNNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
+ +Y + NN EQ +LG++L+ + + FL +HF DP H +F AI +
Sbjct: 20 TAEYRTPPNNE-----EAEQALLGAILVNNKAYEKVGEFLRPEHFYDPAHQRIFAAINK 73
>gi|90419484|ref|ZP_01227394.1| replicative DNA helicase [Aurantimonas manganoxydans SI85-9A1]
gi|90336421|gb|EAS50162.1| replicative DNA helicase [Aurantimonas manganoxydans SI85-9A1]
Length = 488
Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPII-SFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + ++ FL HF +P+H E+F
Sbjct: 16 IEAEQALLGAMLVNNDAYYVVHDFLKPDHFFEPLHREIF 54
>gi|126740434|ref|ZP_01756122.1| replicative DNA helicase [Roseobacter sp. SK209-2-6]
gi|126718570|gb|EBA15284.1| replicative DNA helicase [Roseobacter sp. SK209-2-6]
Length = 537
Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ + S +++ HF DP+H+ ++ A R + N
Sbjct: 65 VEAEQQLLGAILTNNDVYDRVASIINSSHFYDPVHTRIYEIAAARISKN 113
>gi|254477600|ref|ZP_05090986.1| replicative DNA helicase [Ruegeria sp. R11]
gi|214031843|gb|EEB72678.1| replicative DNA helicase [Ruegeria sp. R11]
Length = 503
Score = 36.9 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ + S +++ HF DP+H+ ++ A R + N
Sbjct: 32 VEAEQQLLGAILTNNDIYDRVASIINSAHFYDPVHARIYEIAAARISKN 80
>gi|149913817|ref|ZP_01902349.1| replicative DNA helicase [Roseobacter sp. AzwK-3b]
gi|149812101|gb|EDM71932.1| replicative DNA helicase [Roseobacter sp. AzwK-3b]
Length = 497
Score = 36.9 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITR 63
I EQ++LG+LL + + S + QHF DP+H ++ A+ R
Sbjct: 24 IEAEQQLLGALLTNNEVYDRVASIIKPQHFYDPVHQRIYETAVAR 68
>gi|86749578|ref|YP_486074.1| replicative DNA helicase [Rhodopseudomonas palustris HaA2]
gi|86572606|gb|ABD07163.1| primary replicative DNA helicase [Rhodopseudomonas palustris
HaA2]
Length = 498
Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL+A+HF + IH +F T
Sbjct: 27 IEAEQALLGAILVNNDAFYRVSDFLEAKHFFETIHQTIFETAT 69
>gi|299133692|ref|ZP_07026886.1| replicative DNA helicase [Afipia sp. 1NLS2]
gi|298591528|gb|EFI51729.1| replicative DNA helicase [Afipia sp. 1NLS2]
Length = 498
Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +PIH +F
Sbjct: 27 IEAEQSLLGAILVNNDAFYRVSDFLEPKHFFEPIHQVIF 65
>gi|114704796|ref|ZP_01437704.1| replicative DNA helicase [Fulvimarina pelagi HTCC2506]
gi|114539581|gb|EAU42701.1| replicative DNA helicase [Fulvimarina pelagi HTCC2506]
Length = 496
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPII-SFLDAQHFIDPIHSEVF 58
+ EQ +LG++L+ + I+ FL A HF +P+H ++F
Sbjct: 23 LEAEQALLGAILVNNDAYYIVHDFLKADHFYEPLHRDIF 61
>gi|89068954|ref|ZP_01156336.1| replicative DNA helicase [Oceanicola granulosus HTCC2516]
gi|89045535|gb|EAR51599.1| replicative DNA helicase [Oceanicola granulosus HTCC2516]
Length = 501
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + A+HF DP+H+ ++
Sbjct: 29 IEAEQQLLGAILTNNDVYDRVASIIGAEHFYDPVHAVIY 67
>gi|115525319|ref|YP_782230.1| replicative DNA helicase [Rhodopseudomonas palustris BisA53]
gi|115519266|gb|ABJ07250.1| primary replicative DNA helicase [Rhodopseudomonas palustris
BisA53]
Length = 498
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL +HF +P+H VF
Sbjct: 27 IEAEQSVLGAILVNNDAFYRVSDFLKGEHFFEPVHQAVF 65
>gi|163739576|ref|ZP_02146985.1| replicative DNA helicase [Phaeobacter gallaeciensis BS107]
gi|163741438|ref|ZP_02148829.1| replicative DNA helicase [Phaeobacter gallaeciensis 2.10]
gi|161385172|gb|EDQ09550.1| replicative DNA helicase [Phaeobacter gallaeciensis 2.10]
gi|161387035|gb|EDQ11395.1| replicative DNA helicase [Phaeobacter gallaeciensis BS107]
Length = 506
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFR-AITRKTTN 67
+ EQ++LG++L ++ I S + + HF DP+H+ ++ A R + N
Sbjct: 35 VEAEQQLLGAILTNNDVYDRIASIITSAHFYDPVHTRIYEIAAARISKN 83
>gi|163732013|ref|ZP_02139459.1| replicative DNA helicase [Roseobacter litoralis Och 149]
gi|161394311|gb|EDQ18634.1| replicative DNA helicase [Roseobacter litoralis Och 149]
Length = 497
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + +HF DP+H+ ++
Sbjct: 24 IEAEQQLLGAVLTNNDIYDRVASIIGPKHFYDPVHARIY 62
>gi|254460244|ref|ZP_05073660.1| replicative DNA helicase [Rhodobacterales bacterium HTCC2083]
gi|206676833|gb|EDZ41320.1| replicative DNA helicase [Rhodobacteraceae bacterium HTCC2083]
Length = 496
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + S + +HF DP+H ++
Sbjct: 24 IEAEQQLLGAILTNNDIYDRVASIIQPRHFFDPVHQRIY 62
>gi|154253907|ref|YP_001414731.1| replicative DNA helicase [Parvibaculum lavamentivorans DS-1]
gi|154157857|gb|ABS65074.1| replicative DNA helicase [Parvibaculum lavamentivorans DS-1]
Length = 497
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 21 IGLEQEILGSLLLKG-NLQPIISFLDAQHFIDPIHSEVFRAITRKTT 66
I EQ +LG++L+ + + SFL+ HF D +H ++ A + T
Sbjct: 27 IDAEQALLGAMLVNNESYDRVASFLEPSHFFDAVHGRIYEAAAKLIT 73
>gi|209885498|ref|YP_002289355.1| replicative DNA helicase [Oligotropha carboxidovorans OM5]
gi|209873694|gb|ACI93490.1| replicative DNA helicase [Oligotropha carboxidovorans OM5]
Length = 515
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +PIH +F
Sbjct: 44 IEAEQSLLGAILVNNDAFYRVSDFLEQKHFYEPIHQLIF 82
>gi|83311196|ref|YP_421460.1| replicative DNA helicase [Magnetospirillum magneticum AMB-1]
gi|82946037|dbj|BAE50901.1| Replicative DNA helicase [Magnetospirillum magneticum AMB-1]
Length = 487
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 22 GLEQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVF 58
EQ +LG++LL + + FL +HF DP+H +F
Sbjct: 7 EAEQALLGAILLSNRAFERVSEFLKPEHFADPVHGRIF 44
>gi|114766133|ref|ZP_01445137.1| replicative DNA helicase [Pelagibaca bermudensis HTCC2601]
gi|114541593|gb|EAU44635.1| replicative DNA helicase [Roseovarius sp. HTCC2601]
Length = 494
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + + L A HF +P+H+ ++
Sbjct: 24 IEAEQQLLGAILTNNDIYDRVAAILSAHHFFEPVHARIY 62
>gi|329114431|ref|ZP_08243193.1| Replicative DNA helicase [Acetobacter pomorum DM001]
gi|326696507|gb|EGE48186.1| Replicative DNA helicase [Acetobacter pomorum DM001]
Length = 502
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKTTN 67
+ EQ +LG+LL +S FL +HF + ++ +++ AI R+ N
Sbjct: 28 VEAEQALLGALLTNNRAYDRVSDFLAGEHFANRVNGQIYEAIARRIEN 75
>gi|258541787|ref|YP_003187220.1| replicative DNA helicase [Acetobacter pasteurianus IFO 3283-01]
gi|256632865|dbj|BAH98840.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-01]
gi|256635922|dbj|BAI01891.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-03]
gi|256638977|dbj|BAI04939.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-07]
gi|256642031|dbj|BAI07986.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-22]
gi|256645086|dbj|BAI11034.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-26]
gi|256648141|dbj|BAI14082.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-32]
gi|256651194|dbj|BAI17128.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654185|dbj|BAI20112.1| DNA helicase DnaB [Acetobacter pasteurianus IFO 3283-12]
Length = 518
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKTTN 67
+ EQ +LG+LL +S FL +HF + ++ +++ AI R+ N
Sbjct: 44 VEAEQALLGALLTNNRAYDRVSDFLAGEHFANRVNGQIYEAIARRIEN 91
>gi|157803634|ref|YP_001492183.1| replicative DNA helicase [Rickettsia canadensis str. McKiel]
gi|157784897|gb|ABV73398.1| replicative DNA helicase [Rickettsia canadensis str. McKiel]
Length = 494
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAI 61
I EQ +LG++L L +S FL +HF +PIH +++ AI
Sbjct: 30 IQAEQMLLGAILTNNELLNYVSEFLRLEHFFEPIHQKIYNAI 71
>gi|260428211|ref|ZP_05782190.1| replicative DNA helicase [Citreicella sp. SE45]
gi|260422703|gb|EEX15954.1| replicative DNA helicase [Citreicella sp. SE45]
Length = 489
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L ++ + + L A HF +P+H+ +F
Sbjct: 19 IEAEQQLLGAILTNNDVYDRVAAILGAGHFFEPVHARIF 57
>gi|56697497|ref|YP_167865.1| replicative DNA helicase [Ruegeria pomeroyi DSS-3]
gi|56679234|gb|AAV95900.1| replicative DNA helicase [Ruegeria pomeroyi DSS-3]
Length = 496
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
+N +++ + + EQ++LG++L +L + + +HF DP+H+ ++
Sbjct: 15 QNADTMPHSVEAEQQLLGAILTNNDLYDRVAQIIGPEHFYDPVHARIW 62
>gi|310815866|ref|YP_003963830.1| replicative DNA helicase [Ketogulonicigenium vulgare Y25]
gi|308754601|gb|ADO42530.1| replicative DNA helicase [Ketogulonicigenium vulgare Y25]
Length = 500
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIISFL-DAQHFIDPIHSEVFRAITRKTT 66
I EQ++LG++L + ++ + HF DP+H+ +F ++ T
Sbjct: 27 IEAEQQLLGAILTNNEVYDRVAMIIKPDHFYDPVHARIFEVAAQRIT 73
>gi|148255206|ref|YP_001239791.1| replicative DNA helicase [Bradyrhizobium sp. BTAi1]
gi|146407379|gb|ABQ35885.1| primary replicative DNA helicase [Bradyrhizobium sp. BTAi1]
Length = 502
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +P+H +F
Sbjct: 28 IEAEQGLLGAILVNNDAFYRVSDFLEPKHFFEPLHQTIF 66
>gi|163868011|ref|YP_001609215.1| replicative DNA helicase [Bartonella tribocorum CIP 105476]
gi|161017662|emb|CAK01220.1| Replicative DNA helicase [Bartonella tribocorum CIP 105476]
Length = 496
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 6 SKKYYSRNNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
SKK S + + + I EQ +LG++ + + L + FL +HF +P+H +++ ++
Sbjct: 12 SKKEDSPSFRQLPHNIEAEQALLGAIFINNDSLDRVSDFLKPEHFFEPLHQKIYAVLS 69
>gi|91205744|ref|YP_538099.1| replicative DNA helicase [Rickettsia bellii RML369-C]
gi|157827128|ref|YP_001496192.1| replicative DNA helicase [Rickettsia bellii OSU 85-389]
gi|122990905|sp|Q1RI04|DNAB_RICBR RecName: Full=Replicative DNA helicase
gi|91069288|gb|ABE05010.1| Replicative DNA helicase [Rickettsia bellii RML369-C]
gi|157802432|gb|ABV79155.1| replicative DNA helicase [Rickettsia bellii OSU 85-389]
Length = 498
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAI 61
+ EQ +LG++L L +S FL ++HF +PIH +++ I
Sbjct: 29 VQAEQMLLGAILTNNELLNYVSEFLRSEHFFEPIHQKIYNGI 70
>gi|144899039|emb|CAM75903.1| replicative DNA helicase [Magnetospirillum gryphiswaldense MSR-1]
Length = 497
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 22 GLEQEILGSLLLKG-NLQPIISFLDAQHFIDPIHSEVFRAITR 63
EQ +LG++LL + + +L +HF DP H VF A +
Sbjct: 18 EAEQALLGAILLNNRTFERVSEYLRPEHFADPTHGRVFAACAK 60
>gi|163746598|ref|ZP_02153956.1| replicative DNA helicase [Oceanibulbus indolifex HEL-45]
gi|161380483|gb|EDQ04894.1| replicative DNA helicase [Oceanibulbus indolifex HEL-45]
Length = 510
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 16 SIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
S+ + I EQ++LG++L ++ + S + +HF +P+H+ +F
Sbjct: 30 SMPHSIEAEQQLLGAILTNNDVYDRVASVIGPKHFYEPVHARIF 73
>gi|51473725|ref|YP_067482.1| replicative DNA helicase [Rickettsia typhi str. Wilmington]
gi|81390050|sp|Q68WJ2|DNAB_RICTY RecName: Full=Replicative DNA helicase
gi|51460037|gb|AAU04000.1| replicative DNA helicase [Rickettsia typhi str. Wilmington]
Length = 497
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITR 63
I EQ +LG+++ L +S FL +HF +PIH +++ AI +
Sbjct: 30 IQAEQMLLGAIITNNELLSYVSEFLRNEHFFEPIHQKIYDAIEK 73
>gi|58039659|ref|YP_191623.1| replicative DNA helicase [Gluconobacter oxydans 621H]
gi|58002073|gb|AAW60967.1| Replicative DNA helicase [Gluconobacter oxydans 621H]
Length = 504
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 24 EQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRK 64
EQ +LG++L +S FL+ HF DP++ ++ AI R+
Sbjct: 35 EQALLGAILTNNKAYERVSDFLEPAHFSDPLNGRIYEAIARR 76
>gi|307945027|ref|ZP_07660363.1| putative replicative DNA helicase [Roseibium sp. TrichSKD4]
gi|307770900|gb|EFO30125.1| putative replicative DNA helicase [Roseibium sp. TrichSKD4]
Length = 466
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 RNNNSIYYFIGLEQEILGSLLLKGNLQ-PIISFLDAQHFIDPIHSEVFRAI 61
+NN+ ++ I E+ +LGSLL + ++ L A+HFI PI+ ++ A+
Sbjct: 2 QNNDKVHQTIMAERSVLGSLLDNPSAYFEVLETLKAEHFIRPINQRIYEAM 52
>gi|159044916|ref|YP_001533710.1| replicative DNA helicase [Dinoroseobacter shibae DFL 12]
gi|157912676|gb|ABV94109.1| replicative DNA helicase [Dinoroseobacter shibae DFL 12]
Length = 506
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 21 IGLEQEILGSLLLKGNLQPIISFL-DAQHFIDPIHSEVFR-AITRKTTN 67
I EQ++LG++L ++ +S + +HF DP+H ++ A TR N
Sbjct: 30 IEAEQQLLGAILTNNDVFDRVSMIIQPEHFFDPVHRRIYEVAATRIQKN 78
>gi|227540568|ref|ZP_03970617.1| DNA replication protein DnaC [Sphingobacterium spiritivorum ATCC
33300]
gi|300771347|ref|ZP_07081223.1| replicative DNA helicase DnaB [Sphingobacterium spiritivorum ATCC
33861]
gi|227239650|gb|EEI89665.1| DNA replication protein DnaC [Sphingobacterium spiritivorum ATCC
33300]
gi|300762017|gb|EFK58837.1| replicative DNA helicase DnaB [Sphingobacterium spiritivorum ATCC
33861]
Length = 532
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I LE+ +LG+L+L+ N L II L A+ F H ++F AI
Sbjct: 42 IDLEEAVLGALMLEKNALSEIIDILKAESFYKEAHQKIFEAI 83
>gi|255262774|ref|ZP_05342116.1| replicative DNA helicase [Thalassiobium sp. R2A62]
gi|255105109|gb|EET47783.1| replicative DNA helicase [Thalassiobium sp. R2A62]
Length = 500
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAITRK 64
I EQ++LG++L ++ + + S + +HF DP+H+ ++ + +
Sbjct: 24 IEAEQQLLGAILTNNDVFERVSSIIQPEHFYDPVHALIYETASAR 68
>gi|332186794|ref|ZP_08388536.1| replicative DNA helicase [Sphingomonas sp. S17]
gi|332013127|gb|EGI55190.1| replicative DNA helicase [Sphingomonas sp. S17]
Length = 497
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAI 61
I E +LG++++ L ++ LD HF +P+H VF AI
Sbjct: 22 IEAEAALLGAMMIDNRLADDLVDRLDPDHFFEPVHGRVFAAI 63
>gi|187929404|ref|YP_001899891.1| DnaB domain-containing protein helicase domain-containing protein
[Ralstonia pickettii 12J]
gi|187726294|gb|ACD27459.1| DnaB domain protein helicase domain protein [Ralstonia pickettii
12J]
Length = 464
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 19 YFIGLEQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRAITR 63
Y I EQ +LG LLL N + L+ H H E+ RAI R
Sbjct: 14 YAIEAEQAVLGGLLLDNNAIDRVGGLEPAHIYRHDHREILRAIVR 58
>gi|85716399|ref|ZP_01047371.1| replicative DNA helicase [Nitrobacter sp. Nb-311A]
gi|85696756|gb|EAQ34642.1| replicative DNA helicase [Nitrobacter sp. Nb-311A]
Length = 496
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
+ E+ +LG++L+ + + FL+ +HF DP+H +F
Sbjct: 25 VEAERGLLGAILVNNDAFYRVSDFLEPKHFFDPMHRTIF 63
>gi|146340279|ref|YP_001205327.1| replicative DNA helicase [Bradyrhizobium sp. ORS278]
gi|146193085|emb|CAL77096.1| putative replicative DNA helicase, dnaB [Bradyrhizobium sp.
ORS278]
Length = 500
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL+ +HF +P+H +F
Sbjct: 26 IEAEQGLLGAILVNNDAFYRVSDFLEPKHFYEPLHQTIF 64
>gi|304392031|ref|ZP_07373973.1| replicative DNA helicase [Ahrensia sp. R2A130]
gi|303296260|gb|EFL90618.1| replicative DNA helicase [Ahrensia sp. R2A130]
Length = 503
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF-------RAITR 63
+ EQ +LG++L+ + + FL+A HF +P+H +++ RA+ R
Sbjct: 32 MEAEQALLGAILVNNDAFYRVSDFLEADHFFEPLHRQIYNVAADMIRAVKR 82
>gi|294677112|ref|YP_003577727.1| replicative DNA helicase [Rhodobacter capsulatus SB 1003]
gi|294475932|gb|ADE85320.1| replicative DNA helicase [Rhodobacter capsulatus SB 1003]
Length = 493
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ++LG +L + + I S + A+HF +P+H +F
Sbjct: 21 IEAEQQLLGLILTNNDVMDRIASVVRAEHFFEPVHRTIF 59
>gi|154246345|ref|YP_001417303.1| replicative DNA helicase [Xanthobacter autotrophicus Py2]
gi|154160430|gb|ABS67646.1| replicative DNA helicase [Xanthobacter autotrophicus Py2]
Length = 493
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
+ EQ +LG++L+ + FL+ +HF +PIH+ VF
Sbjct: 21 LEAEQALLGAILVNNEAFYRVSDFLEPRHFYEPIHARVF 59
>gi|114569760|ref|YP_756440.1| replicative DNA helicase [Maricaulis maris MCS10]
gi|114340222|gb|ABI65502.1| replicative DNA helicase [Maricaulis maris MCS10]
Length = 494
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 24 EQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVFRAIT 62
EQ LG+LL + + +L A+HF DP+H +F T
Sbjct: 27 EQAFLGALLYDNEMFHRVADWLKAEHFYDPVHGRIFETAT 66
>gi|189502320|ref|YP_001958037.1| hypothetical protein Aasi_0948 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497761|gb|ACE06308.1| hypothetical protein Aasi_0948 [Candidatus Amoebophilus asiaticus
5a2]
Length = 509
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVFRAITRKTTN 67
I LEQ ILG+L+L K L +I L F + H E+++AI N
Sbjct: 35 IELEQSILGALMLEKDALTEVIDILKPNSFYEESHQEIYKAIIELFNN 82
>gi|15604399|ref|NP_220915.1| replicative DNA helicase [Rickettsia prowazekii str. Madrid E]
gi|7674004|sp|Q9ZD08|DNAB_RICPR RecName: Full=Replicative DNA helicase
gi|3861091|emb|CAA14991.1| PROBABLE REPLICATIVE DNA HELICASE (dnaB) [Rickettsia prowazekii]
gi|292572157|gb|ADE30072.1| Replicative DNA helicase [Rickettsia prowazekii Rp22]
Length = 486
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITR 63
I EQ +LG+++ L +S FL +HF +PIH +++ AI +
Sbjct: 22 IQAEQMLLGAIITNNALLSYVSEFLRNEHFFEPIHQKIYDAIEK 65
>gi|148284509|ref|YP_001248599.1| replicative DNA helicase [Orientia tsutsugamushi str. Boryong]
gi|146739948|emb|CAM79977.1| replicative DNA helicase [Orientia tsutsugamushi str. Boryong]
Length = 487
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 18 IQAEQMILGAVLINNRVLYSINEFLLPEHFYEPLHGKIYKSI 59
>gi|92117812|ref|YP_577541.1| replicative DNA helicase [Nitrobacter hamburgensis X14]
gi|91800706|gb|ABE63081.1| replicative DNA helicase [Nitrobacter hamburgensis X14]
Length = 496
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I E+ +LG++L+ + + FL+ +HF +PIH +F
Sbjct: 25 IEAERGVLGAILVNNDAFYRVSDFLEPKHFFEPIHRTIF 63
>gi|124007892|ref|ZP_01692593.1| replicative DNA helicase [Microscilla marina ATCC 23134]
gi|123986654|gb|EAY26444.1| replicative DNA helicase [Microscilla marina ATCC 23134]
Length = 514
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVFRAI 61
I LE+ +LG+L++ K L II L F P H E+++AI
Sbjct: 9 IELEEAVLGALMIEKDALTDIIDVLKPNSFYKPAHQEIYQAI 50
>gi|157964673|ref|YP_001499497.1| replicative DNA helicase [Rickettsia massiliae MTU5]
gi|157844449|gb|ABV84950.1| Replicative DNA helicase [Rickettsia massiliae MTU5]
Length = 495
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRAITRKT 65
+ EQ +LG++L L +S FL +HF + IH ++++AI + T
Sbjct: 31 VQAEQMLLGAILTNNELLNYVSEFLRDEHFFESIHQKIYKAIEKIT 76
>gi|90423793|ref|YP_532163.1| replicative DNA helicase [Rhodopseudomonas palustris BisB18]
gi|90105807|gb|ABD87844.1| primary replicative DNA helicase [Rhodopseudomonas palustris
BisB18]
Length = 498
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL +HF +PIH ++
Sbjct: 27 IEAEQSVLGAILINNDAFYRVSDFLKLEHFFEPIHQTIY 65
>gi|189184761|ref|YP_001938546.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189181532|dbj|BAG41312.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|126727199|ref|ZP_01743036.1| replicative DNA helicase [Rhodobacterales bacterium HTCC2150]
gi|126703627|gb|EBA02723.1| replicative DNA helicase [Rhodobacterales bacterium HTCC2150]
Length = 499
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFR-AITRKTTN 67
+ S+ + I EQ++LG++L +L IS + ++HF +P+H ++ A TR N
Sbjct: 16 DTESLPHNIEAEQQLLGAILTNNDLFDRISAIVKSEHFYEPVHQRIYDVAATRIHRN 72
>gi|84502661|ref|ZP_01000780.1| replicative DNA helicase [Oceanicola batsensis HTCC2597]
gi|84389056|gb|EAQ01854.1| replicative DNA helicase [Oceanicola batsensis HTCC2597]
Length = 498
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 15 NSIYYFIGLEQEILGSLLLKGNL-QPIISFLDAQHFIDPIHSEVF 58
+++ + I EQ++LG+LL ++ I + +HF +P+H +F
Sbjct: 21 DTVPHSIEAEQQLLGALLTNNDVYDRIAQLIGPEHFYEPVHGRIF 65
>gi|189183221|ref|YP_001937006.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189183887|ref|YP_001937672.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189184023|ref|YP_001937808.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179992|dbj|BAG39772.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180658|dbj|BAG40438.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180794|dbj|BAG40574.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|89054231|ref|YP_509682.1| replicative DNA helicase [Jannaschia sp. CCS1]
gi|88863780|gb|ABD54657.1| replicative DNA helicase [Jannaschia sp. CCS1]
Length = 501
Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ++LG++L + L + + HF DP+H+E+F
Sbjct: 28 IEAEQQLLGAILTSNDVLDRVDDLVKPDHFHDPVHAEIF 66
>gi|121602539|ref|YP_988805.1| replicative DNA helicase [Bartonella bacilliformis KC583]
gi|120614716|gb|ABM45317.1| replicative DNA helicase [Bartonella bacilliformis KC583]
Length = 500
Score = 34.6 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 3 SDFSKKYYSRNNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
S S K + + + Y I EQ +LG++L+ N + + FL +HF + +H ++F +
Sbjct: 9 SSPSHKEKTSSFRQLPYNIEAEQALLGAILINNNAIDRVSDFLKPEHFFEILHQKIFDIL 68
Query: 62 TR 63
++
Sbjct: 69 SQ 70
>gi|319404039|emb|CBI77627.1| Replicative DNA helicase [Bartonella rochalimae ATCC BAA-1498]
Length = 499
Score = 34.6 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG++L+ + L + FL ++HF +H ++F +++
Sbjct: 27 IEAEQALLGAILINNDALDRVSDFLKSEHFFQQLHQQLFEVVSQ 70
>gi|189183940|ref|YP_001937725.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180711|dbj|BAG40491.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 482
Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 15 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 56
>gi|189183470|ref|YP_001937255.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180241|dbj|BAG40021.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 340
Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189183360|ref|YP_001937145.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180131|dbj|BAG39911.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189183375|ref|YP_001937160.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180146|dbj|BAG39926.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 159
Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189184638|ref|YP_001938423.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189181409|dbj|BAG41189.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 34.6 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|124008271|ref|ZP_01692967.1| replicative DNA helicase [Microscilla marina ATCC 23134]
gi|123986220|gb|EAY26049.1| replicative DNA helicase [Microscilla marina ATCC 23134]
Length = 496
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
+ LE+ +LG+L++ N + ++S L + F P H E+++ I
Sbjct: 20 LELEEIVLGALMIDRNVISSVVSILKPKDFYKPAHQEIYQTI 61
>gi|189183795|ref|YP_001937580.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180566|dbj|BAG40346.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 477
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189183664|ref|YP_001937449.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189180435|dbj|BAG40215.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 159
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189183073|ref|YP_001936858.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179844|dbj|BAG39624.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 482
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|319784444|ref|YP_004143920.1| DEAD/DEAH helicase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170332|gb|ADV13870.1| replicative DNA helicase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 496
Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL A HF +P+H +++
Sbjct: 23 IEAEQALLGAILVNNDAFYRVSDFLKASHFYEPLHRKIY 61
>gi|189184605|ref|YP_001938390.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189181376|dbj|BAG41156.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|189183197|ref|YP_001936982.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179968|dbj|BAG39748.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 482
Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|312113723|ref|YP_004011319.1| replicative DNA helicase [Rhodomicrobium vannielii ATCC 17100]
gi|311218852|gb|ADP70220.1| replicative DNA helicase [Rhodomicrobium vannielii ATCC 17100]
Length = 506
Score = 34.6 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKG-NLQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG++L+ + + FL+ HF +P+H +F + +
Sbjct: 32 IEAEQALLGAVLINNESFDRVSGFLEPNHFFEPLHGRLFEIMGK 75
>gi|18202006|sp|O30477|DNAB_RHOMR RecName: Full=Replicative DNA helicase; Contains: RecName:
Full=Endonuclease PI-Rma43812IP; AltName: Full=Rma dnaB
intein
gi|2335167|gb|AAB66912.1| DNA helicase [Rhodothermus marinus]
Length = 941
Score = 34.6 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGNLQP-IISFLDAQHFIDPIHSEVFRAITR 63
+ LEQ +LG++L++ P + L + F D H +FRAI R
Sbjct: 50 VELEQAVLGAMLIEPEAIPRALEILTPEAFYDGRHQRIFRAIVR 93
>gi|268315593|ref|YP_003289312.1| replicative DNA helicase [Rhodothermus marinus DSM 4252]
gi|2661771|emb|CAA74140.1| helicase [Rhodothermus marinus]
gi|262333127|gb|ACY46924.1| replicative DNA helicase [Rhodothermus marinus DSM 4252]
Length = 945
Score = 34.6 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGNLQP-IISFLDAQHFIDPIHSEVFRAITR 63
+ LEQ +LG++L++ P + L + F D H +FRAI R
Sbjct: 51 VELEQAVLGAMLIEPEAIPRALEILTPEAFYDGRHQRIFRAIVR 94
>gi|188587499|ref|YP_001919044.1| primary replicative DNA helicase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352186|gb|ACB86456.1| primary replicative DNA helicase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 448
Score = 34.6 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITRKTTN 67
I EQ +LG++LL G + + FL F H ++FRA+ N
Sbjct: 13 IEAEQSVLGAMLLDGEAISSVTEFLRPGDFYKEAHEKIFRAVVSLAEN 60
>gi|189183159|ref|YP_001936944.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179930|dbj|BAG39710.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 389
Score = 34.6 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|47177056|ref|YP_015667.1| replicative DNA helicase [Oligotropha carboxidovorans OM5]
gi|47115447|emb|CAG28500.1| replicative DNA helicase (DnaB) [Oligotropha carboxidovorans OM5]
Length = 522
Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLK-GNLQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ L + FL + HF +P+H +F
Sbjct: 57 IEAEQALLGAILINNAALFRVSDFLRSDHFFEPLHGTIF 95
>gi|158422154|ref|YP_001523446.1| DnaB helicase [Azorhizobium caulinodans ORS 571]
gi|158329043|dbj|BAF86528.1| DnaB helicase [Azorhizobium caulinodans ORS 571]
Length = 492
Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
+ EQ +LG++L+ + FL A+HF +P+H ++
Sbjct: 21 VEAEQALLGAILVNNEAFYRVSDFLKAEHFYEPLHGRIY 59
>gi|255536481|ref|YP_003096852.1| Replicative DNA helicase [Flavobacteriaceae bacterium 3519-10]
gi|255342677|gb|ACU08790.1| Replicative DNA helicase [Flavobacteriaceae bacterium 3519-10]
Length = 531
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVFRAITR 63
+ E+ ++G+ L+ K L I L + F DP H E+FRAI +
Sbjct: 31 VDFEKLVIGTFLIDKKGLDYSIDLLTPEVFYDPRHQEIFRAILK 74
>gi|306842265|ref|ZP_07474928.1| replicative DNA helicase [Brucella sp. BO2]
gi|306287645|gb|EFM59092.1| replicative DNA helicase [Brucella sp. BO2]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|254712987|ref|ZP_05174798.1| replicative DNA helicase [Brucella ceti M644/93/1]
gi|254716659|ref|ZP_05178470.1| replicative DNA helicase [Brucella ceti M13/05/1]
gi|261218460|ref|ZP_05932741.1| replicative DNA helicase [Brucella ceti M13/05/1]
gi|261320690|ref|ZP_05959887.1| replicative DNA helicase [Brucella ceti M644/93/1]
gi|260923549|gb|EEX90117.1| replicative DNA helicase [Brucella ceti M13/05/1]
gi|261293380|gb|EEX96876.1| replicative DNA helicase [Brucella ceti M644/93/1]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|161618422|ref|YP_001592309.1| replicative DNA helicase [Brucella canis ATCC 23365]
gi|163842730|ref|YP_001627134.1| replicative DNA helicase [Brucella suis ATCC 23445]
gi|225626958|ref|ZP_03784997.1| replicative DNA helicase [Brucella ceti str. Cudo]
gi|254701254|ref|ZP_05163082.1| replicative DNA helicase [Brucella suis bv. 5 str. 513]
gi|254703801|ref|ZP_05165629.1| replicative DNA helicase [Brucella suis bv. 3 str. 686]
gi|254707822|ref|ZP_05169650.1| replicative DNA helicase [Brucella pinnipedialis M163/99/10]
gi|254709597|ref|ZP_05171408.1| replicative DNA helicase [Brucella pinnipedialis B2/94]
gi|254718627|ref|ZP_05180438.1| replicative DNA helicase [Brucella sp. 83/13]
gi|256031089|ref|ZP_05444703.1| replicative DNA helicase [Brucella pinnipedialis M292/94/1]
gi|256060583|ref|ZP_05450751.1| replicative DNA helicase [Brucella neotomae 5K33]
gi|256159157|ref|ZP_05456974.1| replicative DNA helicase [Brucella ceti M490/95/1]
gi|256254492|ref|ZP_05460028.1| replicative DNA helicase [Brucella ceti B1/94]
gi|256368904|ref|YP_003106410.1| replicative DNA helicase [Brucella microti CCM 4915]
gi|260168220|ref|ZP_05755031.1| replicative DNA helicase [Brucella sp. F5/99]
gi|260566946|ref|ZP_05837416.1| replicative DNA helicase [Brucella suis bv. 4 str. 40]
gi|261221666|ref|ZP_05935947.1| replicative DNA helicase [Brucella ceti B1/94]
gi|261315309|ref|ZP_05954506.1| replicative DNA helicase [Brucella pinnipedialis M163/99/10]
gi|261317125|ref|ZP_05956322.1| replicative DNA helicase [Brucella pinnipedialis B2/94]
gi|261324579|ref|ZP_05963776.1| replicative DNA helicase [Brucella neotomae 5K33]
gi|261751793|ref|ZP_05995502.1| replicative DNA helicase [Brucella suis bv. 5 str. 513]
gi|261754448|ref|ZP_05998157.1| replicative DNA helicase [Brucella suis bv. 3 str. 686]
gi|261757681|ref|ZP_06001390.1| replicative DNA helicase [Brucella sp. F5/99]
gi|265983605|ref|ZP_06096340.1| replicative DNA helicase [Brucella sp. 83/13]
gi|265988163|ref|ZP_06100720.1| replicative DNA helicase [Brucella pinnipedialis M292/94/1]
gi|265997628|ref|ZP_06110185.1| replicative DNA helicase [Brucella ceti M490/95/1]
gi|294851828|ref|ZP_06792501.1| replicative DNA helicase [Brucella sp. NVSL 07-0026]
gi|306839853|ref|ZP_07472651.1| replicative DNA helicase [Brucella sp. NF 2653]
gi|306845079|ref|ZP_07477659.1| replicative DNA helicase [Brucella sp. BO1]
gi|161335233|gb|ABX61538.1| replicative DNA helicase [Brucella canis ATCC 23365]
gi|163673453|gb|ABY37564.1| replicative DNA helicase [Brucella suis ATCC 23445]
gi|225618615|gb|EEH15658.1| replicative DNA helicase [Brucella ceti str. Cudo]
gi|255999062|gb|ACU47461.1| replicative DNA helicase [Brucella microti CCM 4915]
gi|260156464|gb|EEW91544.1| replicative DNA helicase [Brucella suis bv. 4 str. 40]
gi|260920250|gb|EEX86903.1| replicative DNA helicase [Brucella ceti B1/94]
gi|261296348|gb|EEX99844.1| replicative DNA helicase [Brucella pinnipedialis B2/94]
gi|261300559|gb|EEY04056.1| replicative DNA helicase [Brucella neotomae 5K33]
gi|261304335|gb|EEY07832.1| replicative DNA helicase [Brucella pinnipedialis M163/99/10]
gi|261737665|gb|EEY25661.1| replicative DNA helicase [Brucella sp. F5/99]
gi|261741546|gb|EEY29472.1| replicative DNA helicase [Brucella suis bv. 5 str. 513]
gi|261744201|gb|EEY32127.1| replicative DNA helicase [Brucella suis bv. 3 str. 686]
gi|262552096|gb|EEZ08086.1| replicative DNA helicase [Brucella ceti M490/95/1]
gi|264660360|gb|EEZ30621.1| replicative DNA helicase [Brucella pinnipedialis M292/94/1]
gi|264662197|gb|EEZ32458.1| replicative DNA helicase [Brucella sp. 83/13]
gi|294820417|gb|EFG37416.1| replicative DNA helicase [Brucella sp. NVSL 07-0026]
gi|306274494|gb|EFM56289.1| replicative DNA helicase [Brucella sp. BO1]
gi|306405039|gb|EFM61320.1| replicative DNA helicase [Brucella sp. NF 2653]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|148560270|ref|YP_001258469.1| replicative DNA helicase [Brucella ovis ATCC 25840]
gi|148371527|gb|ABQ61506.1| replicative DNA helicase [Brucella ovis ATCC 25840]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|23501351|ref|NP_697478.1| replicative DNA helicase [Brucella suis 1330]
gi|23347243|gb|AAN29393.1| replicative DNA helicase [Brucella suis 1330]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|17987768|ref|NP_540402.1| replicative DNA helicase [Brucella melitensis bv. 1 str. 16M]
gi|62289435|ref|YP_221228.1| replicative DNA helicase [Brucella abortus bv. 1 str. 9-941]
gi|82699361|ref|YP_413935.1| replicative DNA helicase [Brucella melitensis biovar Abortus
2308]
gi|189023685|ref|YP_001934453.1| replicative DNA helicase [Brucella abortus S19]
gi|225851986|ref|YP_002732219.1| replicative DNA helicase [Brucella melitensis ATCC 23457]
gi|237814923|ref|ZP_04593921.1| replicative DNA helicase [Brucella abortus str. 2308 A]
gi|254688747|ref|ZP_05152001.1| replicative DNA helicase [Brucella abortus bv. 6 str. 870]
gi|254693230|ref|ZP_05155058.1| replicative DNA helicase [Brucella abortus bv. 3 str. Tulya]
gi|254696876|ref|ZP_05158704.1| replicative DNA helicase [Brucella abortus bv. 2 str. 86/8/59]
gi|254729780|ref|ZP_05188358.1| replicative DNA helicase [Brucella abortus bv. 4 str. 292]
gi|256044166|ref|ZP_05447073.1| replicative DNA helicase [Brucella melitensis bv. 1 str. Rev.1]
gi|256112974|ref|ZP_05453877.1| replicative DNA helicase [Brucella melitensis bv. 3 str. Ether]
gi|256256994|ref|ZP_05462530.1| replicative DNA helicase [Brucella abortus bv. 9 str. C68]
gi|256264507|ref|ZP_05467039.1| replicative DNA helicase [Brucella melitensis bv. 2 str. 63/9]
gi|260545814|ref|ZP_05821555.1| replicative DNA helicase [Brucella abortus NCTC 8038]
gi|260563524|ref|ZP_05834010.1| replicative DNA helicase [Brucella melitensis bv. 1 str. 16M]
gi|260754226|ref|ZP_05866574.1| replicative DNA helicase [Brucella abortus bv. 6 str. 870]
gi|260757446|ref|ZP_05869794.1| replicative DNA helicase [Brucella abortus bv. 4 str. 292]
gi|260761271|ref|ZP_05873614.1| replicative DNA helicase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883252|ref|ZP_05894866.1| replicative DNA helicase [Brucella abortus bv. 9 str. C68]
gi|261213473|ref|ZP_05927754.1| replicative DNA helicase [Brucella abortus bv. 3 str. Tulya]
gi|265990579|ref|ZP_06103136.1| replicative DNA helicase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994409|ref|ZP_06106966.1| replicative DNA helicase [Brucella melitensis bv. 3 str. Ether]
gi|297247847|ref|ZP_06931565.1| replicative DNA helicase [Brucella abortus bv. 5 str. B3196]
gi|17983491|gb|AAL52666.1| replicative DNA helicase [Brucella melitensis bv. 1 str. 16M]
gi|62195567|gb|AAX73867.1| DnaB, replicative DNA helicase [Brucella abortus bv. 1 str.
9-941]
gi|82615462|emb|CAJ10431.1| ATP/GTP-binding site motif A (P-loop):AAA ATPase:Site-specific
recombinase:DnaB helicase:DnaB-like helicase,
N-terminal:DnaB- [Brucella melitensis biovar Abortus
2308]
gi|189019257|gb|ACD71979.1| replicative DNA helicase [Brucella abortus S19]
gi|225640351|gb|ACO00265.1| replicative DNA helicase [Brucella melitensis ATCC 23457]
gi|237789760|gb|EEP63970.1| replicative DNA helicase [Brucella abortus str. 2308 A]
gi|260097221|gb|EEW81096.1| replicative DNA helicase [Brucella abortus NCTC 8038]
gi|260153540|gb|EEW88632.1| replicative DNA helicase [Brucella melitensis bv. 1 str. 16M]
gi|260667764|gb|EEX54704.1| replicative DNA helicase [Brucella abortus bv. 4 str. 292]
gi|260671703|gb|EEX58524.1| replicative DNA helicase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674334|gb|EEX61155.1| replicative DNA helicase [Brucella abortus bv. 6 str. 870]
gi|260872780|gb|EEX79849.1| replicative DNA helicase [Brucella abortus bv. 9 str. C68]
gi|260915080|gb|EEX81941.1| replicative DNA helicase [Brucella abortus bv. 3 str. Tulya]
gi|262765522|gb|EEZ11311.1| replicative DNA helicase [Brucella melitensis bv. 3 str. Ether]
gi|263001363|gb|EEZ13938.1| replicative DNA helicase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094840|gb|EEZ18578.1| replicative DNA helicase [Brucella melitensis bv. 2 str. 63/9]
gi|297175016|gb|EFH34363.1| replicative DNA helicase [Brucella abortus bv. 5 str. B3196]
gi|326408482|gb|ADZ65547.1| replicative DNA helicase [Brucella melitensis M28]
gi|326538198|gb|ADZ86413.1| replicative DNA helicase [Brucella melitensis M5-90]
Length = 501
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF++P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFLEPLHRRIYEIAT 69
>gi|319407051|emb|CBI80688.1| Replicative DNA helicase [Bartonella sp. 1-1C]
Length = 499
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAITR 63
I EQ +LG++L+ + L + FL ++HF +H ++F +++
Sbjct: 27 IEAEQALLGAILINNDALDRVSDFLKSEHFFQQLHQQLFEIVSQ 70
>gi|110633557|ref|YP_673765.1| DnaB-like helicase-like [Mesorhizobium sp. BNC1]
gi|110284541|gb|ABG62600.1| DnaB-like protein helicase-like protein [Chelativorans sp. BNC1]
Length = 481
Score = 34.2 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 21 IGLEQEILGSLLLKGNLQPIIS-FLDAQHFIDPIHSEVFRA 60
I EQ +LG++++ ++S + +HF +P+H ++F+A
Sbjct: 15 IEAEQALLGAVMVNNACYDLVSRIVRPEHFFEPLHRDIFKA 55
>gi|189183213|ref|YP_001936998.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179984|dbj|BAG39764.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 143
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|260466969|ref|ZP_05813151.1| replicative DNA helicase [Mesorhizobium opportunistum WSM2075]
gi|259029266|gb|EEW30560.1| replicative DNA helicase [Mesorhizobium opportunistum WSM2075]
Length = 496
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
I EQ +LG++L+ + + FL + HF +P+H ++F
Sbjct: 23 IEAEQALLGAILVNNDAFYRVSDFLKSGHFYEPLHRKIF 61
>gi|189183177|ref|YP_001936962.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179948|dbj|BAG39728.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
Length = 461
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++++I
Sbjct: 13 IQAEQMILGAILINNRALYNINEFLLPEHFYEPLHGKIYKSI 54
>gi|315499692|ref|YP_004088495.1| replicative DNA helicase [Asticcacaulis excentricus CB 48]
gi|315417704|gb|ADU14344.1| replicative DNA helicase [Asticcacaulis excentricus CB 48]
Length = 491
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 21 IGLEQEILGSLLL-KGNLQPIISFLDAQHFIDPIHSEVFRAITRK 64
+ EQ +LG+L+ G + + L A+HF +P H ++F I +
Sbjct: 24 LEAEQALLGTLMFDNGAYERLYDGLSARHFYEPFHQKLFATIEEQ 68
>gi|328885640|emb|CCA58879.1| hypothetical protein SVEN_5593 [Streptomyces venezuelae ATCC
10712]
Length = 381
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 24 EQEILGSLLLKGNLQPIISFLDAQHFIDPIHSEVFRAITRKTTNE 68
EQ +LG++LL+ L P + L F P+H VF A+ T E
Sbjct: 25 EQALLGAVLLQPALLPAVEDLSPSFFDSPVHGAVFAAMREVPTPE 69
>gi|189183163|ref|YP_001936948.1| replicative DNA helicase [Orientia tsutsugamushi str. Ikeda]
gi|189179934|dbj|BAG39714.1| replicative DNA helicase, DnaB [Orientia tsutsugamushi str.
Ikeda]
Length = 484
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ ILG++L+ L I FL +HF +P+H +++ +I
Sbjct: 15 IQAEQMILGAVLINNRVLYSINEFLLPEHFYEPLHGKIYTSI 56
>gi|239831321|ref|ZP_04679650.1| replicative DNA helicase [Ochrobactrum intermedium LMG 3301]
gi|239823588|gb|EEQ95156.1| replicative DNA helicase [Ochrobactrum intermedium LMG 3301]
Length = 501
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF +P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFFEPLHRRIYEITT 69
>gi|153007908|ref|YP_001369123.1| replicative DNA helicase [Ochrobactrum anthropi ATCC 49188]
gi|151559796|gb|ABS13294.1| replicative DNA helicase [Ochrobactrum anthropi ATCC 49188]
Length = 501
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAIT 62
I EQ +LG++L+ + + FL HF +P+H ++ T
Sbjct: 27 IEAEQALLGAILINNDAFYRVSDFLKPTHFFEPLHRRIYEITT 69
>gi|298291078|ref|YP_003693017.1| replicative DNA helicase [Starkeya novella DSM 506]
gi|296927589|gb|ADH88398.1| replicative DNA helicase [Starkeya novella DSM 506]
Length = 494
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 13 NNNSIYYFIGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVF 58
N S + I EQ +LG++L+ + FL+ +HF +P+H ++
Sbjct: 15 NYRSAPHNIEAEQALLGAILVNNEAFYRVSDFLEPRHFFEPVHIAIY 61
>gi|320537660|ref|ZP_08037593.1| replicative DNA helicase [Treponema phagedenis F0421]
gi|320145501|gb|EFW37184.1| replicative DNA helicase [Treponema phagedenis F0421]
Length = 472
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 21 IGLEQEILGSLLLKGN-LQPIISFLDAQHFIDPIHSEVFRAI 61
I EQ +LG+LLL N L +I L + F H ++F+AI
Sbjct: 52 IEAEQAVLGALLLDSNVLGTVIELLTTESFYSIHHQKIFQAI 93
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.320 0.143 0.426
Lambda K H
0.267 0.0445 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,415,061,648
Number of Sequences: 14124377
Number of extensions: 52009639
Number of successful extensions: 118920
Number of sequences better than 10.0: 169
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 118816
Number of HSP's gapped (non-prelim): 252
length of query: 69
length of database: 4,842,793,630
effective HSP length: 41
effective length of query: 28
effective length of database: 4,263,694,173
effective search space: 119383436844
effective search space used: 119383436844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.8 bits)