HHsearch alignment for GI: 254781149 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].

Probab=93.98  E-value=0.59  Score=26.90  Aligned_cols=94  Identities=19%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC--CCCEEEE-CCCCC-HHHHHHHHHHHHHCCCCCCCCHHHCC
Q ss_conf             77765530168368870687414889999999996302--2323641-16753-48999999996302232347855501
Q gi|254781149|r  132 VDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMS--GHGVAFF-SLEMD-REKLGARALSNLLYPSSSRIPYLNLI  207 (266)
Q Consensus       132 LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~--g~~Vl~f-SlEMs-~~ql~~R~ls~~t~~~~s~I~~~~l~  207 (266)
T Consensus        33 l~~~~~~~~p~n-~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~~-----~~p~~---  103 (366)
T COG1474          33 LAPALRGERPSN-IIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKLG-----KVPLT---  103 (366)
T ss_pred             HHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHC-----CCCCC---
T ss_conf             999855899860-799889998732899999999973315675799951307878799999999826-----89976---


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEC
Q ss_conf             7889989999999999999729954747
Q gi|254781149|r  208 RGEINQEQYRISQGICEKLQDFPLIIDD  235 (266)
Q Consensus       208 ~g~l~~~e~~~i~~a~~~l~~~pl~IdD  235 (266)
T Consensus       104 -g~~~~~~~~~l~~~~~~~~~~~IvvLD  130 (366)
T COG1474         104 -GDSSLEILKRLYDNLSKKGKTVIVILD  130 (366)
T ss_pred             -CCCHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             -763268999999977741875999976