HHsearch alignment for GI: 254781149 and conserved domain: COG2874
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=97.87 E-value=4.3e-05 Score=55.76 Aligned_cols=69 Identities=28% Similarity=0.362 Sum_probs=64.2
Q ss_pred CCCCHHHHHHHHHH-HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 85111377777655-3016836887068741488999999999630223236411675348999999996
Q gi|254781149|r 124 DIKWGLQSVDHLMG-GVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN 192 (266)
Q Consensus 124 Gi~TG~~~LD~~~g-G~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~ 192 (266)
T Consensus 9 ii~~gndelDkrLGGGiP~GsL~lIEGd~~tGKSvLsqr~~YG~L~~g~~v~yvsTe~T~refi~qm~sl 78 (235)
T COG2874 9 IIKSGNDELDKRLGGGIPVGSLILIEGDNGTGKSVLSQRFAYGFLMNGYRVTYVSTELTVREFIKQMESL 78 (235)
T ss_pred HCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHC
T ss_conf 2067847778651699746769999888985488999999998870895489998403599999988863