HHsearch alignment for GI: 254781149 and conserved domain: COG2874

>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=97.87  E-value=4.3e-05  Score=55.76  Aligned_cols=69  Identities=28%  Similarity=0.362  Sum_probs=64.2

Q ss_pred             CCCCHHHHHHHHHH-HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             85111377777655-3016836887068741488999999999630223236411675348999999996
Q gi|254781149|r  124 DIKWGLQSVDHLMG-GVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN  192 (266)
Q Consensus       124 Gi~TG~~~LD~~~g-G~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~  192 (266)
T Consensus         9 ii~~gndelDkrLGGGiP~GsL~lIEGd~~tGKSvLsqr~~YG~L~~g~~v~yvsTe~T~refi~qm~sl   78 (235)
T COG2874           9 IIKSGNDELDKRLGGGIPVGSLILIEGDNGTGKSVLSQRFAYGFLMNGYRVTYVSTELTVREFIKQMESL   78 (235)
T ss_pred             HCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHC
T ss_conf             2067847778651699746769999888985488999999998870895489998403599999988863