HHsearch alignment for GI: 254781149 and conserved domain: COG4133

>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones].
Probab=93.11  E-value=0.5  Score=27.38  Aligned_cols=104  Identities=18%  Similarity=0.124  Sum_probs=63.9

Q ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-------CCCCE-----------EE------ECCCCCHHHHHHHHHHHH
Q ss_conf             3016836887068741488999999999630-------22323-----------64------116753489999999963
Q gi|254781149|r  138 GVQLRELILIGARPSMGKTTFALSTALHMAM-------SGHGV-----------AF------FSLEMDREKLGARALSNL  193 (266)
Q Consensus       138 G~~~g~LiviaaRP~mGKTa~alnia~~~a~-------~g~~V-----------l~------fSlEMs~~ql~~R~ls~~  193 (266)
T Consensus        24 ~l~~Ge~~~i~G~NG~GKTtLLRilaGLl~p~~G~v~~~~~~i~~~~~~~~~~l~yLGH~~giK~eLTa~ENL-~F~~~~  102 (209)
T COG4133          24 TLNAGEALQITGPNGAGKTTLLRILAGLLRPDAGEVYWQGEPIQNVRESYHQALLYLGHQPGIKTELTALENL-HFWQRF  102 (209)
T ss_pred             EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHH
T ss_conf             8748877999899987588999999712687777578547887320356888878860653443220298888-999997


Q ss_pred             HCC-CCCC-------CC---HHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
Q ss_conf             022-3234-------78---5550178899899999999999997299547479988989
Q gi|254781149|r  194 LYP-SSSR-------IP---YLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM  242 (266)
Q Consensus       194 t~~-~~s~-------I~---~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~  242 (266)
T Consensus       103 ~~~~~~~~i~~Al~~vgL~g~~dlp~~~LSAGQqRRvAlArL~ls~~pLWiLDEP~taLD  162 (209)
T COG4133         103 HGSGNAATIWEALAQVGLAGLEDLPVGQLSAGQQRRVALARLWLSPAPLWILDEPFTALD  162 (209)
T ss_pred             HCCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
T ss_conf             388752049999997386653446022236468999999999727887166448532249