HHsearch alignment for GI: 254781149 and conserved domain: COG4987

>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=95.32  E-value=0.11  Score=31.88  Aligned_cols=116  Identities=18%  Similarity=0.169  Sum_probs=65.4

Q ss_pred             HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCC---HHHHHHHH--HHHHHCCCCC------
Q ss_conf             777765530168368870687414889999999996302232364116753---48999999--9963022323------
Q gi|254781149|r  131 SVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMD---REKLGARA--LSNLLYPSSS------  199 (266)
Q Consensus       131 ~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs---~~ql~~R~--ls~~t~~~~s------  199 (266)
T Consensus       353 ~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL  432 (573)
T COG4987         353 ALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNL  432 (573)
T ss_pred             HHHCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             21056513258876888779998789999999723587887365788673318836689987541232177777899877


Q ss_pred             -----------------CCCHHH------------CC-CC-CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH
Q ss_conf             -----------------478555------------01-78-8998999999999999972995474799889899999
Q gi|254781149|r  200 -----------------RIPYLN------------LI-RG-EINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEFVH  246 (266)
Q Consensus       200 -----------------~I~~~~------------l~-~g-~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~ira  246 (266)
T Consensus       433 ~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE  510 (573)
T COG4987         433 RLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITE  510 (573)
T ss_pred             HHCCCCCCHHHHHHHHHHCCHHHHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf             305999988999999998187999874735342222259974781389999999999707986884488666786439