HHsearch alignment for GI: 254781149 and conserved domain: PRK05748

>PRK05748 replicative DNA helicase; Provisional.
Probab=100.00  E-value=0  Score=393.92  Aligned_cols=243  Identities=24%  Similarity=0.345  Sum_probs=215.3

Q ss_pred             HHHHHHHHC---CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             898986300---57785689999984067636899999999999999999999999999985114442345458999999
Q gi|254781149|r    4 EIISHFESQ---TKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDPTCNTATLIRKSMQSF   80 (266)
Q Consensus         4 ~~~~~le~~---~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~l   80 (266)
T Consensus        69 tv~~~L~~~g~l~~iGg~~yL~~L~~~~~s-~~n~~~ya~iVke~~~~R~li~~~~~i~~~a~~~~~~~~~il~~ae~~l  147 (448)
T PRK05748         69 TVREILDDQGDLEEVGGLSYLVELANSVPT-AANIEYYAKIVREKATLRRLIRTATEIANSAYEPERDADEILDEAEKKI  147 (448)
T ss_pred             HHHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             999999766973431769999999963887-5569999999999999999999999999974278888899999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
Q ss_conf             9999654431046655430116899999999999863-036667851113777776553016836887068741488999
Q gi|254781149|r   81 EDIISEVHLTKNQCTGSSCISIANAATTAMKSAEQQK-KEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFA  159 (266)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~a  159 (266)
T Consensus       148 ~~i~~~~-------~~~~~~~~~d~l~~~~~~ie~~~~~~~~~~Gi~TG~~~LD~~~~G~~~g~LiviaaRP~mGKTa~a  220 (448)
T PRK05748        148 FEVAEAR-------NKSGFKNIKDVLVKAYDRIEMLFNQTGDITGIPTGFRDLDKMTSGLQPNDLIIVAARPSVGKTAFA  220 (448)
T ss_pred             HHHHHCC-------CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH
T ss_conf             9998436-------877754499999999999999971899976105782789998279886737999847998768999


Q ss_pred             HHHHHHHH-HCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCC
Q ss_conf             99999963-02232364116753489999999963022323478555017889989999999999999729954747998
Q gi|254781149|r  160 LSTALHMA-MSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPS  238 (266)
Q Consensus       160 lnia~~~a-~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~  238 (266)
T Consensus       221 lnia~~~a~~~~~~v~~fSlEM~~~~l~~R~la~~-----s~v~~~~i~~g~l~~~~~~~~~~a~~~l~~~~l~i~d~~~  295 (448)
T PRK05748        221 LNIAQNVATKTDKNVAIFSLEMGAESLVMRMLCAE-----GRIDQQKLRTGQLTDEDWPKLTIAVGSLSDAPIYIDDTPG  295 (448)
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH-----HCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf             99999999856980899817788889999999997-----4677777762899999999999999998659837855898


Q ss_pred             CCHHHHHHHHHHHHHHHHHHH
Q ss_conf             898999999999999947999
Q gi|254781149|r  239 PGIMEFVHVANGLRNKHTKMV  259 (266)
Q Consensus       239 ~ti~~ira~aR~~k~k~~~~~  259 (266)
T Consensus       296 ~ti~~i~~~~r~~~~~~~~~~  316 (448)
T PRK05748        296 IKVTEIRARCRRLAQEHGGLG  316 (448)
T ss_pred             CCHHHHHHHHHHHHHHCCCCC
T ss_conf             868999999999999759988