HHsearch alignment for GI: 254781149 and conserved domain: PRK06321
>PRK06321 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=399.19 Aligned_cols=247 Identities=19% Similarity=0.249 Sum_probs=205.7
Q ss_pred HHHHHHH---HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 8989863---0057785689999984067636899999999999999999999999999985114442345458999999
Q gi|254781149|r 4 EIISHFE---SQTKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDPTCNTATLIRKSMQSF 80 (266)
Q Consensus 4 ~~~~~le---~~~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 80 (266)
T Consensus 75 Tv~~~L~~~~~l~~iGG~~yL~~L~~~~~s-~an~~~Ya~iV~eks~~R~li~~~~~i~~~a~~~~~d~~~~ld~ae~~l 153 (472)
T PRK06321 75 LAGEELKRRNQLTVIGGPSYLITLAEFAGT-SAYIEEYVEIIRSKSILRKMIQAAKEIEKKALEEPKDVAVALDEAQNLL 153 (472)
T ss_pred HHHHHHHHCCCHHHCCCHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 999999746981321769999999872887-8899999999999899999999999999986358989999999999999
Q ss_pred HHHHHHHHHHCCCCCCC--------CHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 99996544310466554--------30116899999999999863---03666785111377777655301683688706
Q gi|254781149|r 81 EDIISEVHLTKNQCTGS--------SCISIANAATTAMKSAEQQK---KEGENPDIKWGLQSVDHLMGGVQLRELILIGA 149 (266)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~Gi~TG~~~LD~~~gG~~~g~Liviaa 149 (266)
T Consensus 154 ~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~e~~e~~~~~~~~~~~~~itGipTGf~~LD~lt~Gl~~Gdliviaa 233 (472)
T PRK06321 154 FKISQTTNLAQYVLVADKLKGLTSTKDKPFLLQLQERQEAFQQSAQDDSSPMISGIPTHFIDLDKMINGFSPSNLMILAA 233 (472)
T ss_pred HHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
T ss_conf 99970357665410465650221000157899999999999975212578876422568488999855988675799853
Q ss_pred CCCHHHHHHHHHHHHHHHHCC-CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 874148899999999963022-3236411675348999999996302232347855501788998999999999999972
Q gi|254781149|r 150 RPSMGKTTFALSTALHMAMSG-HGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQD 228 (266)
Q Consensus 150 RP~mGKTa~alnia~~~a~~g-~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~ 228 (266)
T Consensus 234 RPsmGKTalalnia~~~a~~~~~~v~~fSLEMs~~ql~~R~ls~~-----s~i~~~~i~~g~l~~~e~~~~~~a~~~l~~ 308 (472)
T PRK06321 234 RPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQLIHRIICSR-----SEVESKKISVGDLSGRDFQRIVSVVNEMQE 308 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 899977999999999999856994699757799999999998740-----376755210479999999999999999854
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9954747998898999999999999947
Q gi|254781149|r 229 FPLIIDDRPSPGIMEFVHVANGLRNKHT 256 (266)
Q Consensus 229 ~pl~IdD~~~~ti~~ira~aR~~k~k~~ 256 (266)
T Consensus 309 ~~l~idd~~~~ti~~i~~~~r~~k~~~~ 336 (472)
T PRK06321 309 HTLLIDDQPGLKITDLRARARRMKESYD 336 (472)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 8757867999989999999999987389