HHsearch alignment for GI: 254781149 and conserved domain: PRK06731

>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=95.14  E-value=0.32  Score=28.72  Aligned_cols=87  Identities=14%  Similarity=0.173  Sum_probs=55.1

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCH----HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH
Q ss_conf             3688706874148899999999963022323641167534----899999999630223234785550178899899999
Q gi|254781149|r  143 ELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDR----EKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRI  218 (266)
Q Consensus       143 ~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~----~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~  218 (266)
T Consensus        76 ~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~DtyR~aA~eQL--k~~a~~l-----~v~~~~~~----~~~~~~~  144 (270)
T PRK06731         76 QTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQL--QDYVKTI-----GFEVIAVR----DEAAMTR  144 (270)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHH--HHHHHHH-----CCCEECCC----CHHHHHH
T ss_conf             18999888989889999999999986799089998388888899999--9999981-----99535458----8789999


Q ss_pred             HHHHHHHHHHCCCEEECCCCCC
Q ss_conf             9999999972995474799889
Q gi|254781149|r  219 SQGICEKLQDFPLIIDDRPSPG  240 (266)
Q Consensus       219 i~~a~~~l~~~pl~IdD~~~~t  240 (266)
T Consensus       145 ~~~~~~~~~~~DvilIDTAGR~  166 (270)
T PRK06731        145 ALTYFKEEARVDYILIDTAGKN  166 (270)
T ss_pred             HHHHHHHHCCCCEEEEECCCCC
T ss_conf             9999999769999999799987