HHsearch alignment for GI: 254781149 and conserved domain: PRK06793

>PRK06793 fliI flagellum-specific ATP synthase; Validated.
Probab=91.63  E-value=0.15  Score=30.93  Aligned_cols=97  Identities=15%  Similarity=0.127  Sum_probs=57.2

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHC---------------------------CCCEEEE
Q ss_conf             8511137777765530168368870687414889999999996302---------------------------2323641
Q gi|254781149|r  124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAMS---------------------------GHGVAFF  176 (266)
Q Consensus       124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~---------------------------g~~Vl~f  176 (266)
T Consensus       139 ~l~TGIraID~l~p-igrGQR~gIfg~sGvGKstLl~~i~~~~~adv~Vi~lIGeRgrEv~efi~~~l~~~gl~~tvvV~  217 (432)
T PRK06793        139 VFETGIKSIDSMLT-IGIGQKIGIFAGSGVGKSTLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVV  217 (432)
T ss_pred             CCCCCCCHHHHCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             40048731000156-12462666632689878999999987245786579998886279999999986446752127887


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCC-CCC---CCHHHHHHHHHHHHHHH
Q ss_conf             1675348999999996302232347855501-788---99899999999999997
Q gi|254781149|r  177 SLEMDREKLGARALSNLLYPSSSRIPYLNLI-RGE---INQEQYRISQGICEKLQ  227 (266)
Q Consensus       177 SlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~-~g~---l~~~e~~~i~~a~~~l~  227 (266)
T Consensus       218 at--sd~p~~~r~~a~~~a~aiA----Eyfrd~G~~VLli~DslTr~A~A~REis  266 (432)
T PRK06793        218 AT--SDESHLMQLRAAKLATSIA----EYFRDQGNNVLLMMDSVTRFADARRSVD  266 (432)
T ss_pred             EC--CCCCHHHHHHHHHHHHHHH----HHHHHCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             25--8899899998875512378----8998669968999456788888874778