HHsearch alignment for GI: 254781149 and conserved domain: PRK06904

>PRK06904 replicative DNA helicase; Validated.
Probab=100.00  E-value=0  Score=390.19  Aligned_cols=247  Identities=20%  Similarity=0.295  Sum_probs=208.1

Q ss_pred             HHHHHHHHC---CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHH
Q ss_conf             898986300---57785689999984067636899999999999999999999999999985114-44234545899999
Q gi|254781149|r    4 EIISHFESQ---TKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDP-TCNTATLIRKSMQS   79 (266)
Q Consensus         4 ~~~~~le~~---~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~-~~~~~~~~~~~e~~   79 (266)
T Consensus        82 Tv~~~L~~~g~l~~iGG~~YL~~L~~~~ps-~an~~~Ya~iVkeks~~R~li~~~~~i~~~a~~~~~~~~~~ild~ae~~  160 (472)
T PRK06904         82 TLDQALKTKGKSDEVGGFAYLAELSNNTPS-AANILAYADIVREKAILRELISVGNNIAKNAYSPKGQDIKDILDEAERD  160 (472)
T ss_pred             HHHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             999999636980322859999999971997-8899999999999999999999988999986377788989999999999


Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
Q ss_conf             99999654431046655430116899999999999863036667851113777776553016836887068741488999
Q gi|254781149|r   80 FEDIISEVHLTKNQCTGSSCISIANAATTAMKSAEQQKKEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFA  159 (266)
Q Consensus        80 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~a  159 (266)
T Consensus       161 l~~i~~~~~~~--~~~~~~~~~~~~~~~~~ie~~~~~~~~~~~~Gi~TG~~~LD~~t~Gl~~g~LiViAaRPsmGKTa~a  238 (472)
T PRK06904        161 VFSIAEKRTTA--NEGPQNVINLLENTIDKIENLAATPTNNGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFA  238 (472)
T ss_pred             HHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHH
T ss_conf             99998525767--7650549999999999999999742899962322897999744158875757999737987568999


Q ss_pred             HHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCC-CCHHHHHHHHHHHHHHHHCC-CEEECC
Q ss_conf             9999996302-23236411675348999999996302232347855501788-99899999999999997299-547479
Q gi|254781149|r  160 LSTALHMAMS-GHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGE-INQEQYRISQGICEKLQDFP-LIIDDR  236 (266)
Q Consensus       160 lnia~~~a~~-g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~-l~~~e~~~i~~a~~~l~~~p-l~IdD~  236 (266)
T Consensus       239 lnia~n~A~~~~~~V~~fSLEM~~~~l~~R~ls~~-----s~v~~~~i~~g~~l~~~e~~~~~~~~~~l~~~~~l~idd~  313 (472)
T PRK06904        239 MNLCENAAMASEKPVLVFSLEMPAEQIMMRMLASL-----SRVDQTKIRTGQNLDQQDWAKISSTVGMFKQKPNLYIDDS  313 (472)
T ss_pred             HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH-----CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             99999999955995799778799999999999986-----4999888646885609999999999999846898168469


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9889899999999999994799
Q gi|254781149|r  237 PSPGIMEFVHVANGLRNKHTKM  258 (266)
Q Consensus       237 ~~~ti~~ira~aR~~k~k~~~~  258 (266)
T Consensus       314 ~~~t~~~i~~~~r~~~~~~~~l  335 (472)
T PRK06904        314 SGLTPTELRSRARRVYRENGGL  335 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCC
T ss_conf             9999999999999999873899