HHsearch alignment for GI: 254781149 and conserved domain: PRK07004
>PRK07004 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=409.26 Aligned_cols=244 Identities=21% Similarity=0.293 Sum_probs=210.4
Q ss_pred HHHHHHHH---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHH
Q ss_conf 89898630---057785689999984067636899999999999999999999999999985114-44234545899999
Q gi|254781149|r 4 EIISHFES---QTKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDP-TCNTATLIRKSMQS 79 (266)
Q Consensus 4 ~~~~~le~---~~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~-~~~~~~~~~~~e~~ 79 (266)
T Consensus 74 tv~~~L~~~~~l~~iGg~~yL~~L~~~~~s-~ani~~ya~iVke~~~~R~li~~~~~i~~~a~~~~~~d~~~il~~ae~~ 152 (460)
T PRK07004 74 TVYEALTTSGKAEEVGGLAYLNALAQNTPS-AANIRRYAEIVRDRAVLRRLVSVADEISADAFNPQGKEVRQLLDEAESK 152 (460)
T ss_pred HHHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 999998425964542889999999973984-8999999999988999999999999999873288777899999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH---HHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf 99999654431046655430116899999999999---863036667851113777776553016836887068741488
Q gi|254781149|r 80 FEDIISEVHLTKNQCTGSSCISIANAATTAMKSAE---QQKKEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKT 156 (266)
Q Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKT 156 (266)
T Consensus 153 l~~i~~~~~-----~~~~~~~~i~~~l~~~~e~ie~~~~~~~~~~~~Gi~TGf~~LD~~t~Gl~~gdLiIIAARPsmGKT 227 (460)
T PRK07004 153 VFSIAEEGA-----RGTQGFLEIGPLLTQVVERIDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKT 227 (460)
T ss_pred HHHHHHHCC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHH
T ss_conf 999986156-----678760309999999999999999615999985386793889865238987757999736876426
Q ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEC
Q ss_conf 99999999963-02232364116753489999999963022323478555017889989999999999999729954747
Q gi|254781149|r 157 TFALSTALHMA-MSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDD 235 (266)
Q Consensus 157 a~alnia~~~a-~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD 235 (266)
T Consensus 228 afAlniA~n~A~~~g~~V~~FSLEMs~eql~~Rlls~~-----s~I~~~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD 302 (460)
T PRK07004 228 AFSMNIGEYVAVEYGLPVAVFSMEMPGTQLAMRMLGSV-----GRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDE 302 (460)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHC-----CCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99999999998725886699847799999999999860-----6988211007889999999999999998559748968
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99889899999999999994799
Q gi|254781149|r 236 RPSPGIMEFVHVANGLRNKHTKM 258 (266)
Q Consensus 236 ~~~~ti~~ira~aR~~k~k~~~~ 258 (266)
T Consensus 303 ~~~lt~~~ira~~Rr~~~~~g~l 325 (460)
T PRK07004 303 TGGLNPMELRSRARRLARQCGKL 325 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 98730789999999999743588