HHsearch alignment for GI: 254781149 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=95.97 E-value=0.06 Score=33.80 Aligned_cols=114 Identities=21% Similarity=0.222 Sum_probs=56.8
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC------EEEECCCCCHHHHHHHHHHHHHCCCCCCCCH-HHCC----CC
Q ss_conf 68368870687414889999999996302232------3641167534899999999630223234785-5501----78
Q gi|254781149|r 141 LRELILIGARPSMGKTTFALSTALHMAMSGHG------VAFFSLEMDREKLGARALSNLLYPSSSRIPY-LNLI----RG 209 (266)
Q Consensus 141 ~g~LiviaaRP~mGKTa~alnia~~~a~~g~~------Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~-~~l~----~g 209 (266)
T Consensus 38 l~HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~~~hpdl~~i~r~~d~k~~~~~~ 117 (363)
T PRK07471 38 LHHAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAAGAHGGLLTLERSWNEKGKRLRT 117 (363)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 76458767999818899999999998579997777767870531258777289999526999846676200113332124
Q ss_pred CCCHHHHHHH-----------------------------HHHHHHHHHCC-----CEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8998999999-----------------------------99999997299-----547479988989999999999999
Q gi|254781149|r 210 EINQEQYRIS-----------------------------QGICEKLQDFP-----LIIDDRPSPGIMEFVHVANGLRNK 254 (266)
Q Consensus 210 ~l~~~e~~~i-----------------------------~~a~~~l~~~p-----l~IdD~~~~ti~~ira~aR~~k~k 254 (266)
T Consensus 118 ~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn~~aaNALLK~LEEPP~~t~fiLit~~~~~llpTI~SRCq~~~~~ 196 (363)
T PRK07471 118 VITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMNANAANALLKVLEEPPARSLLLLVSHAPARLLPTIRSRCRKLRLR 196 (363)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCHHHHHHHCCCCCCC
T ss_conf 4539999999999724852489669998687873889999999972158988389986399777779999735242589