HHsearch alignment for GI: 254781149 and conserved domain: PRK08727
>PRK08727 hypothetical protein; Validated.
Probab=94.27 E-value=0.51 Score=27.29 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=59.0
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHH-HH
Q ss_conf 68368870687414889999999996302232364116753489999999963022323478555017889989999-99
Q gi|254781149|r 141 LRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYR-IS 219 (266)
Q Consensus 141 ~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~-~i 219 (266)
T Consensus 40 ~~~~lyl~G~~GsGKTHLl~a~~~~~~~~~~~~~yl~l~~~~~~~~~-~l~~le~~~ll~iDDid~i~g---~~~~e~aL 115 (233)
T PRK08727 40 SSDWLYLSGPAGTGKTHLALSLCAAAEQAGRSSAYLPLQAAAGRLRD-ALEALEGRSLVALDGVDSIAG---QREDEVAL 115 (233)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH-HHHHHCCCCEEEEECCHHCCC---CHHHHHHH
T ss_conf 88989998999998899999999999827997288447885320256-775310389789855011269---82799999
Q ss_pred HHHHHHHHHC--CCEEECCC-----CCCHHHHHHHHHH
Q ss_conf 9999999729--95474799-----8898999999999
Q gi|254781149|r 220 QGICEKLQDF--PLIIDDRP-----SPGIMEFVHVANG 250 (266)
Q Consensus 220 ~~a~~~l~~~--pl~IdD~~-----~~ti~~ira~aR~ 250 (266)
T Consensus 116 FhL~N~~~~~~~~ll~ts~~~P~~l~~~l~DL~SRL~~ 153 (233)
T PRK08727 116 FDFHNRARAAGITLLYTARQMPDGLALVLPDLRSRLSQ 153 (233)
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHHHHC
T ss_conf 99999998619838997798956623100219999966