HHsearch alignment for GI: 254781149 and conserved domain: PRK08760
>PRK08760 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=401.13 Aligned_cols=241 Identities=24% Similarity=0.329 Sum_probs=212.0
Q ss_pred HHHHHHHC---CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHH
Q ss_conf 98986300---5778568999998406763689999999999999999999999999998511-4442345458999999
Q gi|254781149|r 5 IISHFESQ---TKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSD-PTCNTATLIRKSMQSF 80 (266)
Q Consensus 5 ~~~~le~~---~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~-~~~~~~~~~~~~e~~l 80 (266)
T Consensus 93 v~~~L~~~~~le~iGG~~YL~~L~~~~ps-~an~~~Ya~iVkeks~~R~li~~~~~i~~~a~~~~~~d~~eil~~ae~~i 171 (476)
T PRK08760 93 LGEWFESQGKLEQVGDGAYLIELASTTPS-AANIAAYAEIVRDKAVLRQLIEVGTTIVNDGFQPEGRESIELLASAEKAV 171 (476)
T ss_pred HHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99999647982324889999999971898-88999999999999999999999999999863756787899999999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
Q ss_conf 9999654431046655430116899999999999863-036667851113777776553016836887068741488999
Q gi|254781149|r 81 EDIISEVHLTKNQCTGSSCISIANAATTAMKSAEQQK-KEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFA 159 (266)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~a 159 (266)
T Consensus 172 ~~i~~~~~-----~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~Gi~TG~~~LD~~t~Gl~~G~LiViaaRPsmGKTala 246 (476)
T PRK08760 172 FKIAEAGA-----RGRTDFVAMPGALKDAFEELRNRFENGGNITGLPTGYNDFDAMTAGLQPTDLIILAARPAMGKTTFA 246 (476)
T ss_pred HHHHHHCC-----CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHH
T ss_conf 99986057-----6777730099999999999999985799953367796889974469987777999877887478999
Q ss_pred HHHHHHHH-HCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCC
Q ss_conf 99999963-02232364116753489999999963022323478555017889989999999999999729954747998
Q gi|254781149|r 160 LSTALHMA-MSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPS 238 (266)
Q Consensus 160 lnia~~~a-~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~ 238 (266)
T Consensus 247 lnia~~~A~~~~~~V~~fSLEMs~~ql~~Rlls~~-----s~v~~~~i~~g~l~~~e~~~~~~a~~~l~~~~l~idD~~~ 321 (476)
T PRK08760 247 LNIAEYAAIKSKKGVAVFSMEMSASQLAMRLISSN-----GRINAQRLRTGALEDEDWARVTGAIKMLKETKIFIDDTPG 321 (476)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH-----CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCC
T ss_conf 99999999837997899703699999999999983-----3897677764899999999999999998608816857999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 898999999999999947
Q gi|254781149|r 239 PGIMEFVHVANGLRNKHT 256 (266)
Q Consensus 239 ~ti~~ira~aR~~k~k~~ 256 (266)
T Consensus 322 ~t~~~ir~~~R~~k~~~~ 339 (476)
T PRK08760 322 VSPEVLRSKCRRLKREHD 339 (476)
T ss_pred CCHHHHHHHHHHHHHHCC
T ss_conf 999999999999987279