HHsearch alignment for GI: 254781149 and conserved domain: PRK09099
>PRK09099 type III secretion system ATPase; Provisional.
Probab=90.47 E-value=0.16 Score=30.85 Aligned_cols=43 Identities=26% Similarity=0.175 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 85111377777655301683688706874148899999999963
Q gi|254781149|r 124 DIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA 167 (266)
Q Consensus 124 Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a 167 (266)
T Consensus 146 pl~TGIraID~l~p-igrGQR~gIf~gsGvGKstLl~~iar~~~ 188 (441)
T PRK09099 146 PLPTGVRIVDGLMT-LGEGQRMGIFAPAGVGKSTLMGMFARGTQ 188 (441)
T ss_pred CCCCCCEEECCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 41278562236678-03476330015898878999998987513