HHsearch alignment for GI: 254781149 and conserved domain: PRK09165
>PRK09165 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=413.73 Aligned_cols=240 Identities=28% Similarity=0.387 Sum_probs=210.6
Q ss_pred HHHHHHH---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHH
Q ss_conf 9898630---057785689999984067636899999999999999999999999999985114442--34545899999
Q gi|254781149|r 5 IISHFES---QTKISFSTYLNNLLTLASSISSEVINAARRVVQQWARITISQEAKALALHTSDPTCN--TATLIRKSMQS 79 (266)
Q Consensus 5 ~~~~le~---~~~i~~~~YL~~L~~~~~s~~~~~~~ya~~i~e~~~rR~l~~~~~~~~~~~~~~~~~--~~~~~~~~e~~ 79 (266)
T Consensus 69 v~~~L~~~~~l~~vGG~~yL~~L~~~~~s-~an~~~Ya~iV~e~a~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~ae~~ 147 (484)
T PRK09165 69 LKTFLENDEALGELGGVQYLAKLATEAVT-IINARDYGRIIYDLALRRELIGIGEDIVNNAYDAPVDVAPKEQIEDAEQK 147 (484)
T ss_pred HHHHHHHCCCHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 99998645872322779999999970887-77899999999888899999999999999973577676789999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
Q ss_conf 99999654431046655430116899999999999863-03666785111377777655301683688706874148899
Q gi|254781149|r 80 FEDIISEVHLTKNQCTGSSCISIANAATTAMKSAEQQK-KEGENPDIKWGLQSVDHLMGGVQLRELILIGARPSMGKTTF 158 (266)
Q Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gi~TG~~~LD~~~gG~~~g~LiviaaRP~mGKTa~ 158 (266)
T Consensus 148 l~~l~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~Gi~TGf~~LD~~t~G~~~GdLiIIAARPsmGKTaf 221 (484)
T PRK09165 148 LYELAET------GRYEGGFQSFGTAITEAVDMANAAFKRDGHLSGISTGLRDLDSKLGGLHPSDLIILAGRPSMGKTAL 221 (484)
T ss_pred HHHHHHC------CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHH
T ss_conf 9999854------7678884159999999999999998379997733158445998715888773799960799977899
Q ss_pred HHHHHHHHHH---------------CCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999630---------------2232364116753489999999963022323478555017889989999999999
Q gi|254781149|r 159 ALSTALHMAM---------------SGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGIC 223 (266)
Q Consensus 159 alnia~~~a~---------------~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~ 223 (266)
T Consensus 222 aLniA~n~A~~~~~~~~~~~~~~~~~g~~V~~FSLEMs~~ql~~Rlls~~-----s~V~~~~ir~g~l~~~e~~~i~~a~ 296 (484)
T PRK09165 222 ATNIAFNAAKAYLREAQPDGSKKAVNGGVVGFFSLEMSAEQLATRILSEQ-----SEISSSKIRRGKISEEDFEKLVDAS 296 (484)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH-----HCCCHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999987410222233211368984899947799999999999997-----2686135544899999999999999
Q ss_pred HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999729954747998898999999999999947
Q gi|254781149|r 224 EKLQDFPLIIDDRPSPGIMEFVHVANGLRNKHT 256 (266)
Q Consensus 224 ~~l~~~pl~IdD~~~~ti~~ira~aR~~k~k~~ 256 (266)
T Consensus 297 ~~l~~~~l~IdD~~~~ti~~Ira~~Rr~k~~~g 329 (484)
T PRK09165 297 QELQKLPLYIDDTPALSISALRARARRLKRQHG 329 (484)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999719848977999879999999999998609