HHsearch alignment for GI: 254781149 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=97.23  E-value=0.00036  Score=49.26  Aligned_cols=50  Identities=20%  Similarity=0.258  Sum_probs=41.6

Q ss_pred             HCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             016836887068741488999999999630223236411675348999999996
Q gi|254781149|r  139 VQLRELILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSN  192 (266)
Q Consensus       139 ~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~  192 (266)
T Consensus        98 i~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~----~~~L~~~L~~a  147 (258)
T PRK09183         98 IERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTT----AADLLLQLSTA  147 (258)
T ss_pred             HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE----HHHHHHHHHHH
T ss_conf             655886799899998689999999999998799399978----99999999999