HHsearch alignment for GI: 254781149 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=96.87 E-value=0.0049 Score=41.36 Aligned_cols=88 Identities=22% Similarity=0.220 Sum_probs=58.5
Q ss_pred CCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 11137777765-5301683688706874148899999999963022323-641167534899999999630223234785
Q gi|254781149|r 126 KWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGV-AFFSLEMDREKLGARALSNLLYPSSSRIPY 203 (266)
Q Consensus 126 ~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~V-l~fSlEMs~~ql~~R~ls~~t~~~~s~I~~ 203 (266)
T Consensus 79 ~w~~Q---r~WakR~~~g~SFaiiAPTG~GKTtfgl~~sly~a~kgkks~~i~PT~~Lv~Q~~~kl~~~~~---~~~~~~ 152 (1176)
T PRK09401 79 PWSLQ---RTWAKRLLLGESFAIIAPTGVGKTTFGLVMALYLAKKGKKSYIIFPTRLLVEQVVEKLRKLAE---KVGVKV 152 (1176)
T ss_pred CCHHH---HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH---HHCCCC
T ss_conf 84889---999999866897489888998888999999999986598399996888999999999999999---709984
Q ss_pred HH-CCCCCCCHHHHHHH
Q ss_conf 55-01788998999999
Q gi|254781149|r 204 LN-LIRGEINQEQYRIS 219 (266)
Q Consensus 204 ~~-l~~g~l~~~e~~~i 219 (266)
T Consensus 153 ~~~~y~~~~~~~~kee~ 169 (1176)
T PRK09401 153 RLLYYHSSLKKKEKEEF 169 (1176)
T ss_pred EEEEEECCCCHHHHHHH
T ss_conf 08998567766678999