HHsearch alignment for GI: 254781149 and conserved domain: PRK09401

>PRK09401 reverse gyrase; Reviewed.
Probab=96.87  E-value=0.0049  Score=41.36  Aligned_cols=88  Identities=22%  Similarity=0.220  Sum_probs=58.5

Q ss_pred             CCHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf             11137777765-5301683688706874148899999999963022323-641167534899999999630223234785
Q gi|254781149|r  126 KWGLQSVDHLM-GGVQLRELILIGARPSMGKTTFALSTALHMAMSGHGV-AFFSLEMDREKLGARALSNLLYPSSSRIPY  203 (266)
Q Consensus       126 ~TG~~~LD~~~-gG~~~g~LiviaaRP~mGKTa~alnia~~~a~~g~~V-l~fSlEMs~~ql~~R~ls~~t~~~~s~I~~  203 (266)
T Consensus        79 ~w~~Q---r~WakR~~~g~SFaiiAPTG~GKTtfgl~~sly~a~kgkks~~i~PT~~Lv~Q~~~kl~~~~~---~~~~~~  152 (1176)
T PRK09401         79 PWSLQ---RTWAKRLLLGESFAIIAPTGVGKTTFGLVMALYLAKKGKKSYIIFPTRLLVEQVVEKLRKLAE---KVGVKV  152 (1176)
T ss_pred             CCHHH---HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH---HHCCCC
T ss_conf             84889---999999866897489888998888999999999986598399996888999999999999999---709984


Q ss_pred             HH-CCCCCCCHHHHHHH
Q ss_conf             55-01788998999999
Q gi|254781149|r  204 LN-LIRGEINQEQYRIS  219 (266)
Q Consensus       204 ~~-l~~g~l~~~e~~~i  219 (266)
T Consensus       153 ~~~~y~~~~~~~~kee~  169 (1176)
T PRK09401        153 RLLYYHSSLKKKEKEEF  169 (1176)
T ss_pred             EEEEEECCCCHHHHHHH
T ss_conf             08998567766678999