HHsearch alignment for GI: 254781149 and conserved domain: PRK09700
>PRK09700 D-allose transporter ATP-binding protein; Provisional.
Probab=93.41 E-value=0.7 Score=26.35 Aligned_cols=125 Identities=14% Similarity=0.048 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC------CCC-------------EEEECC---------C
Q ss_conf 377777655301683688706874148899999999963-02------232-------------364116---------7
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MS------GHG-------------VAFFSL---------E 179 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~------g~~-------------Vl~fSl---------E 179 (266)
T Consensus 276 ~~~l~~vsf~v~~GEi~gl~G~nGsGKsTL~~~l~Gl~~~~~G~I~~~G~~i~~~~~~~~~~~gi~~v~~~r~~~~l~~~ 355 (510)
T PRK09700 276 RKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred CCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHCCCEEEEEEHHHCCCCCC
T ss_conf 88654335787488189997688862889999981988888618999999999899899997086775310332474889
Q ss_pred CCHH-HHH-HHHHHHH-----HC--------------CCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf 5348-999-9999963-----02--------------232347855501--78899899999999999997299547479
Q gi|254781149|r 180 MDRE-KLG-ARALSNL-----LY--------------PSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFPLIIDDR 236 (266)
Q Consensus 180 Ms~~-ql~-~R~ls~~-----t~--------------~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~ 236 (266)
T Consensus 356 ~sv~en~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~LSGGq~Qrv~iAraL~~~p~lLilDE 435 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDE 435 (510)
T ss_pred CCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 96899998998764210000101367789999999999871886554228814599999999999999985998899979
Q ss_pred CCC-----CHHHHHHHHHHHHH
Q ss_conf 988-----98999999999999
Q gi|254781149|r 237 PSP-----GIMEFVHVANGLRN 253 (266)
Q Consensus 237 ~~~-----ti~~ira~aR~~k~ 253 (266)
T Consensus 436 PT~GlD~~~~~~i~~li~~l~~ 457 (510)
T PRK09700 436 PTRGIDVGAKAEIYKVMRQLAD 457 (510)
T ss_pred CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7558999999999999999996