HHsearch alignment for GI: 254781149 and conserved domain: PRK09700

>PRK09700 D-allose transporter ATP-binding protein; Provisional.
Probab=93.41  E-value=0.7  Score=26.35  Aligned_cols=125  Identities=14%  Similarity=0.048  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC------CCC-------------EEEECC---------C
Q ss_conf             377777655301683688706874148899999999963-02------232-------------364116---------7
Q gi|254781149|r  129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MS------GHG-------------VAFFSL---------E  179 (266)
Q Consensus       129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~------g~~-------------Vl~fSl---------E  179 (266)
T Consensus       276 ~~~l~~vsf~v~~GEi~gl~G~nGsGKsTL~~~l~Gl~~~~~G~I~~~G~~i~~~~~~~~~~~gi~~v~~~r~~~~l~~~  355 (510)
T PRK09700        276 RKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN  355 (510)
T ss_pred             CCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHCCCEEEEEEHHHCCCCCC
T ss_conf             88654335787488189997688862889999981988888618999999999899899997086775310332474889


Q ss_pred             CCHH-HHH-HHHHHHH-----HC--------------CCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf             5348-999-9999963-----02--------------232347855501--78899899999999999997299547479
Q gi|254781149|r  180 MDRE-KLG-ARALSNL-----LY--------------PSSSRIPYLNLI--RGEINQEQYRISQGICEKLQDFPLIIDDR  236 (266)
Q Consensus       180 Ms~~-ql~-~R~ls~~-----t~--------------~~~s~I~~~~l~--~g~l~~~e~~~i~~a~~~l~~~pl~IdD~  236 (266)
T Consensus       356 ~sv~en~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~LSGGq~Qrv~iAraL~~~p~lLilDE  435 (510)
T PRK09700        356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDE  435 (510)
T ss_pred             CCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             96899998998764210000101367789999999999871886554228814599999999999999985998899979


Q ss_pred             CCC-----CHHHHHHHHHHHHH
Q ss_conf             988-----98999999999999
Q gi|254781149|r  237 PSP-----GIMEFVHVANGLRN  253 (266)
Q Consensus       237 ~~~-----ti~~ira~aR~~k~  253 (266)
T Consensus       436 PT~GlD~~~~~~i~~li~~l~~  457 (510)
T PRK09700        436 PTRGIDVGAKAEIYKVMRQLAD  457 (510)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHH
T ss_conf             7558999999999999999996